Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq128449 109 5e-19 seq215049 100 3e-16 seq76495 98.7 9e-16 >seq128449 Length=764 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||||||| | ||||| || ||||| || || || || | Sbjct 428 CCACCACGGAGACGGAGCACCAAATGCAAAGTAGATTCCTTTTGGATGTTATAGTCAGCA 369 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| |||||||| || ||||| | || | | |||||| || || || Sbjct 368 AGGGTGCGCCCATCCTCTAGCTGCTTGCCAGCAAAAATTAGCCTCTGCTGGTCTGGTGGG 309 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||| || || || ||| | | || | |||||| | |||||| || Sbjct 308 ATGCCCTCCTTATCTTGAATCTTGGCCTTCACATTATCAATGGTGTCAGAACTCTCCACC 249 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | ||| | || ||||| || |||||||| |||||||| |||||| Sbjct 248 TCCAAGGTGATGGTCTTGCCTGTGAGAGTTTTCACAAAAATTTGCATG 201 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | |||||| || | |||||||| |||||||| ||||| ||| || Sbjct 656 CCACCACGCAGGCGAAGCACCAAGTGGAGTGTAGACTCCTTTTGAATGTTGTAGTCGGCC 597 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | ||| || ||||| || || || | |||| | ||||| || || || Sbjct 596 AATGTCCTTCCATCTTCAAGCTGCTTGCCGGCAAATATCAGCCTTTGCTGGTCAGGTGGG 537 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || ||||||||| || ||| ||| | | |||| ||||| | || || ||| Sbjct 536 ATTCCTTCCTTGTCCTGTATCTTCGCCTTAACATTGTCGATTGTGTCAGAGCTTTCTACT 477 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | || | || || |||||||| || || ||||||||||||||| Sbjct 476 TCCAAAGTGATTGTCTTTCCGGTCAGTGTCTTCACAAAAATCTGCATG 429 >seq215049 Length=488 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||||||| | |||||||| || ||||||||||| || | | ||||| ||| || Sbjct 10 ACCAAATGGAGAGTAGACTCCTTCTGAATATTGTAGTCCGCAAGTGTGCGGCCATCCTCA 69 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 || || || ||||| |||| | || || ||||| || || ||||||||||| ||| | Sbjct 70 AGTTGCTTCCCAGCAAAGATAAGTCTTTGTTGATCTGGTGGAATGCCCTCCTTATCCTGG 129 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 || || ||| | | || | || || | |||||| || || | || | ||||| Sbjct 130 ATCTTTGCCTTCACATTATCAATTGTATCTGAACTCTCAACCTCCAACGTAATAGTTTTT 189 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || || || || || |||||||| |||||| Sbjct 190 CCCGTGAGGGTCTTCACAAAAATTTGCATG 219 >seq76495 Length=1287 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 ||| || || | ||||||||||| || | | |||| |||||||| ||||| ||| | Sbjct 425 TCCTCCACGCAGACGCAACACCAAGTGAAGGGATGACTTCTTTTGAATGTTGTAGTCGAC 366 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || | | ||| || || || || ||||| | ||||| | |||||| || || || Sbjct 365 AAGAGTCCTACCATCTTCAAGTTGCTTCCCAGCAAAAATCAACCTCTGCTGGTCTGGTGG 306 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||| ||||||||| || || ||| | | || | |||||| | ||||| || Sbjct 305 GATGCCTTCCTTGTCCTGTATCTTTGCCTTCACATTGTCAATGGTGTCGGAGCTCTCAAC 246 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCA 127112 || | || | ||||| || || ||||| || |||||||| |||| Sbjct 245 CTCCAAAGTGATGGTTTTTCCCGTGAGAGTCTTGACAAAAATTTGCA 199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 474109888834880