Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1027 96.9 3e-15 seq76495 93.3 4e-14 seq128449 86.0 6e-12 seq87537 86.0 6e-12 >seq1027 Length=13177 Score = 96.9 bits (106), Expect = 3e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 45109 TTATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAAT 45168 || ||||||| | |||||||| || ||||| || || || ||||| ||||| ||||| | Sbjct 4808 TTGTTCCTCCCCTCAGCCTCAAAACCAGATGAAGTGTAGACTCCTTCTGGATGTTATAGT 4867 Query 45169 CGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 | | |||| ||| |||||||| || || ||| | ||||||| || ||||||| Sbjct 4868 CAGCAAGGGTTCGGCCATCCTCCAATTGCTTGCCAGCGAAAATCAATCTCTGTTGGTCCG 4927 Query 45229 GCGGAATGCCTTCTTTATCTTGA 45251 |||| || ||||| ||||| ||| Sbjct 4928 GCGGGATACCTTCCTTATCCTGA 4950 >seq76495 Length=1287 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 |||||||| || || | |||||| | || || | ||| | |||||| || || || ||| Sbjct 427 ATTCCTCCACGCAGACGCAACACCAAGTGAAGGGATGACTTCTTTTGAATGTTGTAGTCG 368 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || || ||| || | ||| || || || | ||||| | |||||||| || Sbjct 367 ACAAGAGTCCTACCATCTTCAAGTTGCTTCCCAGCAAAAATCAACCTCTGCTGGTCTGGT 308 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || |||||||| || || || || ||| || | || | ||||||||| ||| Sbjct 307 GGGATGCCTTCCTTGTCCTGTATCTTTGCCTTCACATTGTCAATGGTGTCGGAGCTCTCA 248 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCA 45339 || || | ||| | ||||| || || ||||| || ||||||||||||| Sbjct 247 ACCTCCAAAGTGATGGTTTTTCCCGTGAGAGTCTTGACAAAAATTTGCA 199 >seq128449 Length=764 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | ||| | ||||| || |||||||||||||| ||||| || Sbjct 431 ATGCCACCACGGAGACGGAGCACCAAATGCAAAGTAGATTCCTTTTGGATGTTATAGTCA 372 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| || | || || || || | || | | |||||||| || Sbjct 371 GCAAGGGTGCGCCCATCCTCTAGCTGCTTGCCAGCAAAAATTAGCCTCTGCTGGTCTGGT 312 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || ||||| || ||||||||||| || || | || | |||||| ||| ||| Sbjct 311 GGGATGCCCTCCTTATCTTGAATCTTGGCCTTCACATTATCAATGGTGTCAGAACTCTCC 252 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | || | || ||||| || |||||||| |||||||||||||| Sbjct 251 ACCTCCAAGGTGATGGTCTTGCCTGTGAGAGTTTTCACAAAAATTTGCAT 202 >seq87537 Length=233 Score = 86.0 bits (94), Expect = 6e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244 ||| |||| || || ||||| | |||| | ||||||||||||||| || ||||| || Sbjct 200 ATCTTCCAGCTGCTTCCCTGCAAAGATCAGCCTTTGCTGGTCCGGCGGGATCCCTTCCTT 141 Query 45245 ATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||| || || || ||| | || | ||| ||||| ||| || || ||||| | Sbjct 140 ATCCTGGATCTTGGCTTTAACATTATCAATGGTATCGGAGCTCTCCACCTCTAGAGTGAT 81 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || || ||||||||||| ||||| || |||||| Sbjct 80 GGTCTTTCCCGTTAGAGTTTTCACAAAGATCTGCATC 44 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450681022839520