Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_013085.1 Length=194454 Score E Sequences producing significant alignments: (Bits) Value seq98 679 0.0 seq28 560 1e-154 >seq98 Length=41871 Score = 679 bits (752), Expect = 0.0 Identities = 748/993 (75%), Gaps = 2/993 (0%) Strand=Plus/Plus Query 7529 TCAGCAGCAGCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCATG 7588 ||| ||||||| ||||| ||||||||||||||||||||||| || ||||| |||||||| Sbjct 40575 TCAACAGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAACTTCCATA 40634 Query 7589 CCAAGACCAGCACGGTTGAGCACGTCTGCCCAGGTGTTCAGGACACGACCTTGACCATCA 7648 ||||| ||||||||||| | || ||||| || || | ||||||||||||| |||| Sbjct 40635 CCAAGGTTAGCACGGTTGATAATATCAGCCCAAGTATTAATTACACGACCTTGACTATCA 40694 Query 7649 ATGATGGACTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATGGTGCTAACACCAAGA 7708 | | ||| |||||||| |||||||| || | |||||| ||||| ||||||| ||| | | Sbjct 40695 ACTACGGATTGGTTGAAATTGAAACCATTTAAGTTGAAAGCCATAGTGCTAATACCTAAA 40754 Query 7709 GCAGTGAACCAGATGCCAACAACTGGCCATGCTGCGAGGAAGAAGTGCAGCGAACGGGAG 7768 || ||||||||||| || | || ||||| || || ||||||||||| | ||||| ||| Sbjct 40755 GCGGTGAACCAGATACCTATTACAGGCCAAGCAGCTAGGAAGAAGTGTAATGAACGAGAG 40814 Query 7769 TTGTTGAACGAAGCGTATTGGAAGATCAGACGACCAAAGTATCCGTGAGCAGCAACGATG 7828 |||||||| ||| ||||||||||||| || ||||| || || ||||| || ||||| Sbjct 40815 TTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATA 40874 Query 7829 TTGTAGGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGGGACTCAGACTCAGTG 7888 || || || || |||||||||| || || ||||| | || || ||| || || Sbjct 40875 TTATAAGTTTCCCCTTCTTGACCAAATTTGTAACCTTCATTAGCAGATTCATTTTCTGTA 40934 Query 7889 GTTTCACGAACCAGAGAAGAGGTTACAAGCGAACCATGCATCGCACTGAACAGAGAACCA 7948 ||||| | | || | |||||||| | ||||||||||| |||||||| || || || Sbjct 40935 GTTTCCCTGATCAAACTTGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCG 40994 Query 7949 CCAAAGACACCAGCGACGCCCAGCATGTGGAAGGGGTGCATCAGGATGTTGTGCTCTGCT 8008 || || ||||| || ||||| | ||| || || |||||||| |||||||||||||| || Sbjct 40995 CCGAATACACCCGCTACGCCTAACATATGAAATGGGTGCATAAGGATGTTGTGCTCAGCC 41054 Query 8009 TGGAAGACAAGCATGTAGTTGAACGTACCAGAGATGCCAAGAGGCATAGCGTCAGAGAAA 8068 ||||| |||| ||| ||||||| ||||||||||| || | ||||||| |||| || || Sbjct 41055 TGGAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAAAGGCATACCGTCCGAAAAG 41114 Query 8069 GAACCTTGACCGAAAGGATAGACGAGGAATACAGCAGATGCTGCAGCAACTGGAGCAGAG 8128 |||||||| | || || | | ||| ||||| | ||||| ||||| ||||| || Sbjct 41115 CTTCCTTGACCAATTGGGTAAATCAAGAAGACAGCGGTAGCTGCTGCAACAGGAGCTGAA 41174 Query 8129 TATGCTACACAGATCCAGGGACGCATACCTAGACGGTAAGAAAGTTCCCACTCACGACCC 8188 ||||| ||| ||||| || |||||||| | |||| || ||||||||||||||| ||| Sbjct 41175 TATGCAACAGCAATCCAAGGGCGCATACCCAAACGGAAACTAAGTTCCCACTCACGGCCC 41234 Query 8189 ATGTATGCATAGATACCGATCAGGAAGTGGAAGATAACGAGTTGGAAAGGACCACCGTTG 8248 ||||| | | ||| | | |||||| | | || |||| ||||||| |||||| Sbjct 41235 ATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTTG 41294 Query 8249 TAGAGCCACTCATCAAGAGAAGCTGCTTCCCAGATGGGATAGAAGTGGAGACCAATAGCG 8308 || | ||| ||||||| || || |||||||| || || || ||||| | ||| |||||| Sbjct 41295 TATAACCATTCATCAACGGATGCAGCTTCCCATATTGGGTAAAAGTGCAAACCTATAGCG 41354 Query 8309 TTAGAAGAAGGAACAACAGCACCAGAGATGATGTTGTTGCCATACATGAGCGAACCAGCG 8368 ||||| ||||| || |||||||| || || ||||| || || | | || |||| Sbjct 41355 GCAGAAGTAGGAATAATGGCACCAGAAATAATATTGTTTCCGTAAAGTAAAGATCCAGAA 41414 Query 8369 ACGGGTTCACGGATGCCGTCAATGTCCACAGGAGGAGCAGCGACGAAAGCGACGATGAA- 8427 ||||||||||| || || ||||| || || ||||| ||||| | |||||||| || || Sbjct 41415 ACGGGTTCACGAATACCATCAATATCTACTGGAGGGGCAGCAATGAAAGCGATAATAAAT 41474 Query 8428 ACAAATAGCAGCAGCGAGCAGCGTAGGAATCATCAGGACACCGAACCAACCGACATACAG 8487 ||| | || || | | | ||||| ||||||| ||||| ||||| || | || || Sbjct 41475 ACAGA-AGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAG 41533 Query 8488 ACGATTGTTGGTGGAGGTTACCCAGTTACAGAA 8520 ||| || | |||| ||||| |||||||||||| Sbjct 41534 ACGGTTTTCGGTGCTGGTTATCCAGTTACAGAA 41566 >seq28 Length=37419 Score = 560 bits (620), Expect = 1e-154 Identities = 737/1019 (72%), Gaps = 12/1019 (1%) Strand=Plus/Plus Query 6263 AGAGCGTTGCCTCTTGGCAATACTTCTTCAGGAAATACAAAGTTTTCATGTGGTTGATCC 6322 |||||||| || | || | || || || || |||| || ||||||||| || ||||| Sbjct 30317 AGAGCGTTTCCACGGGGTAGAACCTCCTCGGGGAATATAAGGTTTTCATGAGGCTGATCT 30376 Query 6323 ACTGGTGCCATCCAGGCACGTAGACCTTCATTCAATAGGATGTTCTTGGTATAGAACGTC 6382 | |||||||| ||||| | |||||||| || || || || ||||||||||| ||| Sbjct 30377 TGAGCCGCCATCCAAGCACGAATGCCTTCATTTAAAAGAATATTTTTGGTATAGAAAGTC 30436 Query 6383 TCGAACTCTGGATCCTCCGCTGCTCTGATCTCTTGTGAAACAAAGTCATAAGCTCTAAGG 6442 || || || ||||| |||||||| | ||| || || ||||| |||||||| || | ||| Sbjct 30437 TCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGAGAAACGAAGTCATAGGCACGCAGG 30496 Query 6443 TTAAGTGCAAGACCAATAATACCAATGCTAGAGG-----TCCAAAGACCCATAACAGGAA 6497 || || || ||||| ||| | | | |||| |||| | ||| | || || | Sbjct 30497 TTCAGAGCCAGACC-----TACTACTCCAAGAGCGCTCATCCATAAACCAGTTACTGGTA 30551 Query 6498 CAAACAGCATAAAGAAATGTAGCCAACGCTTATTGCTGAAGGCGATACCAAAGATCTGAG 6557 |||| | |||||||||||||| |||||| |||||| || || | |||||||| || | Sbjct 30552 CAAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGGG 30611 Query 6558 ACCAGAAACGATTAGCCGTGACCATCGAATAGGTCTCCTCTTCTTGTGTAGGCTCAAACG 6617 |||| || || || || |||||||| ||||| || || || |||| || || | ||| | Sbjct 30612 ACCAAAAGCGGTTGGCGGTGACCATTGAATAAGTTTCTTCGGCTTGAGTTGGGTTAAAAG 30671 Query 6618 CCTTGAAAGTATTTGATTGTTCACCATCTTCAAACAAAGTATTCTCTACAGTAGCACCGT 6677 | ||| ||||||| ||||| |||||||| |||||||| || ||||||||||| | Sbjct 30672 CGCGGAATGTATTTGCACCATCACCGTCTTCAAATAAAGTATTTTCGACAGTAGCACCAT 30731 Query 6678 GAATAGCACAGAGCAATGCTCCACCTAAGATACCTGCTACACCCATCATATGAAACGGGT 6737 ||||||| || |||| || | || || | ||| || || ||||||||||||||||||| Sbjct 30732 GAATAGCGCACAGCAGAGCCGCGCCCAATACACCAGCAACTCCCATCATATGAAACGGGT 30791 Query 6738 TGAGCGTCCAGTTGTGGAAGCCCTGTAGGAAGAGTAAGAAGCGGAATATCGCTGCAACAC 6797 | || ||||| || || || || || | || || | ||| || ||||| ||||| |||| Sbjct 30792 TCAGTGTCCAATTATGAAACCCTTGGAAAAACAGGATGAATCGAAATATAGCTGCTACAC 30851 Query 6798 CAAACGACGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATACATGAGAAAGACAGACA 6857 |||| || ||||||||||||| ||| || || || ||||| || || || ||||| | Sbjct 30852 CAAAACTAGGTGCAAAGAACCAACCGGATTGACCTAGCGGATAAATCAGGAATACAGAAA 30911 Query 6858 CAAAGACAGCAATGGGACCAGAAAACGCGATTGCATTGTAGGGACG-AATACCGACTAGA 6916 |||| |||||||| ||||||||||| ||||||||||| || || || ||| | || Sbjct 30912 CAAAAACAGCAATTGGACCAGAAAATGCGATTGCATTATAAGGTCGCAATTGC-ACGGAT 30970 Query 6917 CGTGCGATCTCAAACTGCCGAAGCATGAAACCTATAAGGGCAAAGGCTCCGTGGAGCGCC 6976 || || || ||||| || || | ||| |||||||| || | || ||||||||||| || Sbjct 30971 CGAGCAATTTCAAATTGACGTAACATAAAACCTATTAGTCCGAAAGCTCCGTGGAGAGCA 31030 Query 6977 ACAAAAGGCCATAGTCCCCCAAGTTGGAGCCAGCGGACGAAATCTCCCTGAGCTTCTGGA 7036 ||||||| ||| || || || | ||| ||| || ||||| || || ||||| ||| Sbjct 31031 ACAAAAGTCCACAGACCACCTAATTGACACCAACGAGTAAAATCCCCTTGCGCTTCAGGA 31090 Query 7037 CCCCATAGAAGAAGTAGGGAATGTCCGAGAGCGTCAGCAGGAGTTGATACAGCAGCAGTA 7096 |||||||| | | | |||||| | | | | |||||| || || || ||||| || Sbjct 31091 CCCCATAGTAACAACAAAGAATGTGCTAAACTATTAGCAGGGGTAGAAACTGCAGCGGTT 31150 Query 7097 AGGAAATTACATCCCTCAAGATACGAAGAAGCAATCCCGTGAGTGTACCAGCTCGTGACG 7156 | ||| || || || || | ||| || || | || || || |||||| || || Sbjct 31151 AAGAAGTTGCAGCCTTCCAAATAGGAGCTGGCCAATCCATGGGTATACCAGGAGGTTACA 31210 Query 7157 AAAGTTGTGCCCGTGAGCCAACCGCCCAGTGCCAGGTAAGCAGTAGGGAACAGAAGAAGA 7216 |||||||| || |||| |||||| || | || | ||| ||| ||| || || | ||| Sbjct 31211 AAAGTTGTACCTGTGAACCAACCCCCTAAAGCAAAGTAGGCACAAGGAAAGAGCAATAGA 31270 Query 7217 CCTGACCAACCAACAAAAACGAACCTATCACGCTTAAGCCAGTCATCGAGTACATCAAA 7275 || |||||||| || ||||| || | || | | | ||||||||| | | |||||| Sbjct 31271 CCGGACCAACCTACGAAAACAAAACGGTCCCTCCGCAACCAGTCATCCATAATATCAAA 31329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620304991641280