Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq128449 152 1e-31 seq215049 136 9e-27 seq143273 134 3e-26 seq76495 120 7e-22 seq158123 116 9e-21 seq18136 100 7e-16 seq40433 98.7 2e-15 seq87537 96.9 8e-15 >seq128449 Length=764 Score = 152 bits (168), Expect = 1e-31 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | |||||| || ||||||||||| | ||||||||| ||||| |||||||||||| Sbjct 641 AGCACCAAGTGGAGTGTAGACTCCTTTTGAATGTTGTAGTCGGCCAATGTCCTTCCATCT 582 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||| || || || | |||||||| || |||||||| ||| Sbjct 581 TCAAGCTGCTTGCCGGCAAATATCAGCCTTTGCTGGTCAGGTGGGATTCCTTCCTTGTCC 522 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || |||| ||||| | ||||||| ||||| ||||| ||| Sbjct 521 TGTATCTTCGCCTTAACATTGTCGATTGTGTCAGAGCTTTCTACTTCCAAAGTGATTGTC 462 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || ||||||||||| || Sbjct 461 TTTCCGGTCAGTGTCTTCACAAAAATCTG 433 Score = 122 bits (134), Expect = 2e-22 Identities = 144/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 199432 AGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCC 199491 ||| || |||||||||| ||| |||||||| | || | ||||| || |||||||| || Sbjct 399 AGTAGATTCCTTTTGGATGTTATAGTCAGCAAGGGTGCGCCCATCCTCTAGCTGCTTGCC 340 Query 199492 GGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTT 199551 || || || || | ||||||||| || || || || || |||||||| ||| Sbjct 339 AGCAAAAATTAGCCTCTGCTGGTCTGGTGGGATGCCCTCCTTATCTTGAATCTTGGCCTT 280 Query 199552 CACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGT 199611 ||| || | |||||| | | || || ||||| ||||| ||||| || |||||||| Sbjct 279 CACATTATCAATGGTGTCAGAACTCTCCACCTCCAAGGTGATGGTCTTGCCTGTGAGAGT 220 Query 199612 TTTCACAAAAATTTG 199626 ||||||||||||||| Sbjct 219 TTTCACAAAAATTTG 205 Score = 107 bits (118), Expect = 5e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || || || || | ||||||||| || |||||||||| ||||| ||||| | || Sbjct 194 CGGAGCCTGAGCACCAAGTGGAGAGTGGATTCCTTTTGGATATTGTAATCAGCAAGGGTA 135 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || || ||||| || || || ||||| | |||||||||||| |||||| Sbjct 134 CGGCCATCCTCTAGTTGCTTGCCAGCAAAAATGAGCCTCTGCTGGTCCGGTGGGATTCCT 75 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || |||||||| || |||||| || | |||||||| | || || ||||| Sbjct 74 TCCTTATCCTGAATTTTGGCCTTCACATTATCAATGGTGTCTGAGCTCTCAACCTCCAAA 15 Query 199589 GTGATCGTCTTACC 199602 ||||| || || || Sbjct 14 GTGATGGTTTTTCC 1 >seq215049 Length=488 Score = 136 bits (150), Expect = 9e-27 Identities = 113/138 (82%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 ||| |||| || || | ||||||||| |||||||| |||| ||||||||| ||||| || Sbjct 332 TCGGAGTCGAAGCACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGT 391 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 ||| || || ||||||||||||||||||||||| || | |||||||||||| |||||| Sbjct 392 CCTGCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGGGGAATTCC 451 Query 199528 TTCTCGCTCCTGAATCTT 199545 ||| || |||||||| Sbjct 452 TTCCTTGTCTTGAATCTT 469 Score = 109 bits (120), Expect = 1e-18 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||| || || | |||||||| |||||||| || | |||||||| || | || | Sbjct 1 AGTCTAAGTACCAAATGGAGAGTAGACTCCTTCTGAATATTGTAGTCCGCAAGTGTGCGG 60 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 ||||| || || ||||| || || ||||| || | || || || || ||| || || Sbjct 61 CCATCCTCAAGTTGCTTCCCAGCAAAGATAAGTCTTTGTTGATCTGGTGGAATGCCCTCC 120 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 ||||| |||||| |||||| || | || |||| | || || |||||||| Sbjct 121 TTATCCTGGATCTTTGCCTTCACATTATCAATTGTATCTGAACTCTCAACCTCCAACGTA 180 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || |||||||| || |||||||||||||| Sbjct 181 ATAGTTTTTCCCGTGAGGGTCTTCACAAAAATTTG 215 Score = 93.3 bits (102), Expect = 1e-13 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 || |||||||||||||||||| |||| || || ||||| |||||||| |||||| ||||| Sbjct 427 CTGATCTTCGCCGGAAAGCAGCTGGAGGACGGCAGGACCTTGGCCGACTACAACATCCAG 368 Query 200995 AAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 201030 || ||||| ||||| ||| | || | |||| ||| Sbjct 367 AAGGAGTCCACTCTCCACTTGGTGCTTCGACTCCGA 332 >seq143273 Length=304 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||| || ||||| ||||||||||||| ||| ||||| |||| || | |||||| Sbjct 297 AGGACAAGATGCAGAGTGGACTCCTTTTGGATGTTATAGTCTGCCAGGGTACGTCCATCC 238 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || |||||||| || | ||||||||||| ||| ||||| || Sbjct 237 TCTAGCTGCTTACCAGCGAAGATCAGTCTTTGCTGGTCCGGGGGAATACCTTCCTTGTCT 178 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || || || |||||| || | || || | |||| || |||||||| || || Sbjct 177 TGGATTTTGGCCTTCACATTATCAATAGTATCCGAGCTTTCAACCTCCAACGTAATGGTT 118 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || ||||| |||||||| || || Sbjct 117 TTACCAGTCAGAGTCTTCACAAAGATCTG 89 >seq76495 Length=1287 Score = 120 bits (132), Expect = 7e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 199436 GACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCG 199495 |||| |||||| | ||||||||| | | |||||| |||||||| || ||||| || || Sbjct 391 GACTTCTTTTGAATGTTGTAGTCGACAAGAGTCCTACCATCTTCAAGTTGCTTCCCAGCA 332 Query 199496 AAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACG 199555 || || | | ||||||||| || || ||||| ||||| |||||| |||||| Sbjct 331 AAAATCAACCTCTGCTGGTCTGGTGGGATGCCTTCCTTGTCCTGTATCTTTGCCTTCACA 272 Query 199556 GATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTC 199615 || | |||||| | | || || ||||| ||||| || || ||||||||||| || Sbjct 271 TTGTCAATGGTGTCGGAGCTCTCAACCTCCAAAGTGATGGTTTTTCCCGTGAGAGTCTTG 212 Query 199616 ACAAAAATTTG 199626 ||||||||||| Sbjct 211 ACAAAAATTTG 201 Score = 111 bits (122), Expect = 4e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||| || ||||| ||||||||||||| ||||||||| ||||| || | ||||| Sbjct 637 AGGACAAGATGCAGAGTGGACTCCTTTTGGATGTTGTAGTCCGCCAAGGTACGCCCATCC 578 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| || || ||||| | | ||||||||| || ||| ||||| || Sbjct 577 TCCAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCT 518 Query 199538 TGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 || || ||| || ||||| || | || || | | || || ||||| || || || Sbjct 517 TGGAT-TTTAGCTTTCACATTATCAATAGTATCAGAGCTCTCCACCTCCAAGGTAATGGT 459 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || ||||| || || Sbjct 458 TTTCCCAGTCAGCGTCTTAACAAATATCTG 429 >seq158123 Length=1217 Score = 116 bits (128), Expect = 9e-21 Identities = 88/104 (85%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | || |||||||||||| ||||||||||| |||| ||||| || |||| |||| Sbjct 104 CGGAGACGCAAGACAAGGTGGAGGGTCGACTCCTTCTGGATATTGTAATCCGCCAGAGTC 45 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTG 199512 || ||||| ||||||||||||||||||||||| || | |||||| Sbjct 44 CTCCCATCCTCCAGCTGCTTTCCGGCGAAGATCAGCCTCTGCTG 1 Score = 100 bits (110), Expect = 7e-16 Identities = 79/95 (83%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 || |||||||||||||||||| |||| ||||| |||||| |||| |||||||| ||||| Sbjct 10 CTGATCTTCGCCGGAAAGCAGCTGGAGGATGGGAGGACTCTGGCGGATTACAATATCCAG 69 Query 200995 AAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 || ||||| || || |||||||| ||| | || || Sbjct 70 AAGGAGTCGACCCTCCACCTTGTCTTGCGTCTCCG 104 >seq18136 Length=774 Score = 100 bits (110), Expect = 7e-16 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 199411 AAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCT 199470 ||| |||| || || || || || ||||| || |||| |||||||||||| | ||| | Sbjct 649 AAGCCTCAAAACCAGATGAAGTGTTGACTCTTTCTGGATGTTGTAGTCAGCGAGAGTTCG 590 Query 199471 TCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTC 199530 ||||| ||||||||||| |||||||| || || | ||||||||| ||| |||||||| Sbjct 589 GCCATCCTCCAGCTGCTTGCCGGCGAAAATCAGTCTCTGCTGGTCTGGAGGGATTCCTTC 530 Score = 89.7 bits (98), Expect = 1e-12 Identities = 76/94 (81%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 200934 ACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCA 200993 ||| || |||||||| |||||| |||| ||||| | ||| | || || |||||| |||| Sbjct 556 ACTGATTTTCGCCGGCAAGCAGCTGGAGGATGGCCGAACTCTCGCTGACTACAACATCCA 615 Query 200994 GAAAGAGTCTACTCTTCACCTTGTTTTGAGACTT 201027 ||||||||| || ||||| || |||||||| ||| Sbjct 616 GAAAGAGTCAACACTTCATCTGGTTTTGAGGCTT 649 >seq40433 Length=1890 Score = 98.7 bits (108), Expect = 2e-15 Identities = 75/89 (84%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 |||| || | |||||||||||||| |||||| ||||||||||||||||| ||||| |||| Sbjct 955 CCTTCTGAATGTTGTAGTCAGCCAGAGTCCTGCCATCTTCCAGCTGCTTCCCGGCAAAGA 896 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || | |||||| |||||| |||||| Sbjct 895 TAAGCCTCTGCTGATCCGGAGGGATTCCT 867 >seq87537 Length=233 Score = 96.9 bits (106), Expect = 8e-15 Identities = 133/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 199441 CTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGAT 199500 ||| |||| ||| ||||| || | ||| | ||||||||||||||||| || || ||||| Sbjct 233 CTTCTGGATGTTATAGTCCGCAAGAGTACGCCCATCTTCCAGCTGCTTCCCTGCAAAGAT 174 Query 199501 GAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATTC 199560 || | ||||||||||| || ||||| ||||| ||||| || || || Sbjct 173 CAGCCTTTGCTGGTCCGGCGGGATCCCTTCCTTATCCTGGATCTTGGCTTTAACATTATC 114 Query 199561 GACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAAA 199620 | ||| || | | || || || | ||||| ||||| ||||| |||||||||||||| Sbjct 113 AATGGTATCGGAGCTCTCCACCTCTAGAGTGATGGTCTTTCCCGTTAGAGTTTTCACAAA 54 Query 199621 AATTTG 199626 || || Sbjct 53 GATCTG 48 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1175386864418804