Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq228379 161 1e-34 seq128449 123 2e-23 seq76495 107 2e-18 seq215049 91.5 1e-13 >seq228379 Length=361 Score = 161 bits (178), Expect = 1e-34 Identities = 227/310 (73%), Gaps = 8/310 (3%) Strand=Plus/Minus Query 133189 TACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAA-GCACCGCGCCTC 133247 ||||| || ||||| | |||||| |||||||| || ||||| ||||| |||| ||||||| Sbjct 309 TACATCTCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCATAAAAAGCAC-GCGCCTC 251 Query 133248 GACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCT 133307 ||||||| || || | ||| | || | || ||||| ||||| |||||| Sbjct 250 CGCCACCTGAACCTCCTTCATGAAGCTGCCGGCTAGGTTTTCAAGAACGATTCCGTCGGA 191 Query 133308 GGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGT-TGTCGTTCAAGCGC- 133365 ||||||||| ||||||||||| || |||||||| ||||| || ||| ||||| Sbjct 190 GGCGGCGAAGAAGGCCAGCACATGAGAAATGAAATGCTTCTCGTCTGGTGTT--AGCGCT 133 Query 133366 TCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCG 133425 ||||||| || |||| ||| || |||||||||||| | ||||| || || ||||| Sbjct 132 TCCCAGTGACGGAGATCCTGGGAGAGATCCACCTCCTCGGCTGTCCAGAAGGAGGCCTCT 73 Query 133426 GCTTTTTTGTACATACTCCACATGTCCGAATATTGTATGGGAAAAATCACA-AACCGGCG 133484 ||||| |||||||| ||| || || | || || || || || || ||| |||||| Sbjct 72 GCTTTCTTGTACATTTCCCAAATCTCGGGGTACTGGATCGGGAACAT-ACAGAACCGGTC 14 Query 133485 GGGGTTTTCG 133494 ||||| ||| Sbjct 13 AGGGTTCTCG 4 >seq128449 Length=764 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || ||||| ||||| ||||| ||||||||| | || || ||| | Sbjct 202 ATGCAAATTTTTGTGAAAACTCTCACAGGCAAGACCATCACCTTGGAGGTGGAGAGTTCT 261 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || || | || || ||||| || || | ||||| Sbjct 262 GACACCATTGATAATGTGAAGGCCAAGATTCAAGATAAGGAGGGCATCCCACCAGACCAG 321 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| |||| |||| || ||||| ||||| || || | ||||||||| ||||| ||| Sbjct 322 CAGAGGCTAATTTTTGCTGGCAAGCAGCTAGAGGATGGGCGCACCCTTGCTGACTATAAC 381 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||||||| | || ||||||||||||| ||| Sbjct 382 ATCCAAAAGGAATCTACTTTGCATTTGGTGCTCCGT 417 Score = 82.4 bits (90), Expect = 8e-11 Identities = 129/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 38271 GGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAGAAAAA 38330 || ||||||||||| | || || ||| | | |||| | | | | | || | ||| Sbjct 1 GGAAAAACCATCACTTTGGAGGTTGAGAGCTCAGACACCATTGATAATGTGAAGGCCAAA 60 Query 38331 ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAG 38390 || | || || || ||||| || | ||||| ||| ||||||||| || ||||| || Sbjct 61 ATTCAGGATAAGGAAGGAATCCCACCGGACCAGCAGAGGCTCATTTTTGCTGGCAAGCAA 120 Query 38391 CTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTG 38450 || || || | || ||||| || ||||| |||||||||||| | || || || ||| Sbjct 121 CTAGAGGATGGCCGTACCCTTGCTGATTACAATATCCAAAAGGAATCCACTCTCCACTTG 180 Query 38451 GTGCT 38455 ||||| Sbjct 181 GTGCT 185 >seq76495 Length=1287 Score = 107 bits (118), Expect = 2e-18 Identities = 154/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| ||||| || || ||||| || || |||||||| ||| | || || ||| | | Sbjct 425 AATGCAGATATTTGTTAAGACGCTGACTGGGAAAACCATTACCTTGGAGGTGGAGAGCTC 484 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | | |||| ||||||| ||||| || || |||||| | ||||| Sbjct 485 TGATACTATTGATAATGTGAAAGCTAAAATCCAAGACAAGGAAGGCATTCCCCCAGACCA 544 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || | || | || || || |||||||| || | ||| ||| | |||||||| Sbjct 545 GCAGAGGTTGATCTTTGCTGGTAAGCAGCTGGAGGATGGGCGTACCTTGGCGGACTACAA 604 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||||||| | || |||||| | || || ||| Sbjct 605 CATCCAAAAGGAGTCCACTCTGCATCTTGTCCTTCGT 641 Score = 87.8 bits (96), Expect = 2e-12 Identities = 155/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 38245 TGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCG 38304 ||||||| || || || || |||||||| ||||||||||| | || || ||| | ||| Sbjct 199 TGCAAATTTTTGTCAAGACTCTCACGGGAAAAACCATCACTTTGGAGGTTGAGAGCTCCG 258 Query 38305 ACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAAC 38364 ||| | | | | | || | ||| || | ||||| || || || || | ||||| | Sbjct 259 ACACCATTGACAATGTGAAGGCAAAGATACAGGACAAGGAAGGCATCCCACCAGACCAGC 318 Query 38365 AGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACA 38424 || || | |||| || || || || || || || | | || || ||||||||||| Sbjct 319 AGAGGTTGATTTTTGCTGGGAAGCAACTTGAAGATGGTAGGACTCTTGTCGACTACAACA 378 Query 38425 TCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 | |||||| | | | || || |||||| ||||| || | || || Sbjct 379 TTCAAAAGAAGTCATCCCTTCACTTGGTGTTGCGTCTGCGTGGAGG 424 >seq215049 Length=488 Score = 91.5 bits (100), Expect = 1e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| || ||||||||| | ||||| ||| |||| || | ||| || || |||||||| Sbjct 460 GACAAGGAAGGAATTCCCCCGGACCAGCAGAGGCTGATCTTCGCCGGAAAGCAGCTGGAG 401 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 |||| | ||| | ||||||||||||||| ||||| | || || || |||||||| Sbjct 400 GACGGCAGGACCTTGGCCGACTACAACATCCAGAAGGAGTCCACTCTCCACTTGGTGCTT 341 Query 38457 CGTTTGAGAGGCGGC 38471 || | |||| ||| Sbjct 340 CGACTCCGAGGTGGC 326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498709719534080