Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq27324 140 4e-28 seq101798 104 3e-17 >seq27324 Length=1540 Score = 140 bits (154), Expect = 4e-28 Identities = 239/339 (71%), Gaps = 16/339 (5%) Strand=Plus/Plus Query 15918 TCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACCTGTTTCGTTA---TCA 15974 ||||| ||||| | | || ||||| || ||||||| ||| || || |||| ||| Sbjct 1210 TCAAGAATATCTGCCCTGTTAGTTGCTGCAATGACAATAATGCCAGT---GTTACCCTCA 1266 Query 15975 AAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 16034 ||||||||||| ||||| ||||||||||||| || || || | ||| ||||| | | Sbjct 1267 AAACCATCCATTTCTGTTAAAAGCTGGTTAAGTGTCTGCTCTCTTTCGTCATT---TCCC 1323 Query 16035 ATACCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATG 16091 |||| |||| | | ||| | || || |||||||| ||||||| || || ||| Sbjct 1324 CCACCAATTCCAGTTCCTCTTTGTCTACCAACAGCATCAATTTCATCAACAAACACAATG 1383 Query 16092 CATGGTTGATTTTCGCGAGC-GACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACC 16150 ||||| ||| || ||| ||| ||| ||||||| || || || || ||||| Sbjct 1384 CATGGGGCATTATCCTTAGCTTTCTTGAAA-AGATCCCTGACTCGAGAAGCACCAACACC 1442 Query 16151 AACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCAC 16209 |||||||||||| ||||| | | | ||| || | | ||| || ||| || ||||| Sbjct 1443 AACAAACATCTCAACAAACTCAGAACCAGAA-ATGGAAAAGAATGGAACACCAGCTTCAC 1501 Query 16210 CCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTG 16248 | ||||| || ||| ||||||||||| || || |||| Sbjct 1502 CAGCAATCGCCTTGGCTAGAAGAGTCTTTCCAGTTCCTG 1540 >seq101798 Length=623 Score = 104 bits (114), Expect = 3e-17 Identities = 248/367 (68%), Gaps = 10/367 (3%) Strand=Plus/Minus Query 15888 TCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCGGCG 15947 ||||| | ||||| | ||| || || |||||| || ||| |||||| || || || Sbjct 374 TCAAATCTTCCTGGTCTAAGCAGAGCAGAATCAAGTATTTCAGGGCGATTTGTAGCAGCA 315 Query 15948 ATGACAA-CAATAC-CTGTTTCGTTATCAAAACCATCCATCTCTGTCAAAAGCTGGTTAA 16005 ||||||| || | | ||||| | | |||||||||||| || |||| | |||||| | Sbjct 314 ATGACAATCACTCCACTGTTACC--ACTAAAACCATCCATTTCAGTCAGCAACTGGTTTA 257 Query 16006 TAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGCTTTCCCACGG 16065 || ||||||| ||||||||| || | ||||| | | ||| ||||||| | Sbjct 256 GCGTCTGTTCCCTCTCATCATTCCCTCCACCAATACCAGTTCCTCTCTGCCTTCCCACAG 197 Query 16066 CATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGAT 16125 | ||||||||||| || || || | ||||| |||| | || | || | | Sbjct 196 CGTCAATCTCATCGATAAACACCAGACATGGAGCATTTGCCTTGGCCTTGTTGAACAAGT 137 Query 16126 CCCGTACACGCTTG--GCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACA 16183 ||| ||| |||| || |||||||||||||||||||| | || | || | | ||| Sbjct 136 CCC--TCACTCTTGAAGCCCCCACACCAACAAACATCTCGATGAACTCTGATCCTG-ACA 80 Query 16184 TTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 16242 || | ||| || || | || ||| || || || || ||| || | ||||| || | Sbjct 79 GTGAAAAGAAAGGAACTTCAGCTTCTCCAGCTATTGCCTTGGCTAGCAAGGTCTTCCCAG 20 Query 16243 TACCTGG 16249 | ||||| Sbjct 19 TCCCTGG 13 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618926635368640