Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq27324 120 4e-22 seq101798 109 6e-19 seq88759 93.3 5e-14 >seq27324 Length=1540 Score = 120 bits (132), Expect = 4e-22 Identities = 230/335 (69%), Gaps = 8/335 (2%) Strand=Plus/Plus Query 9225 TCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAAA 9284 ||||| ||||| | | || || || || ||||||| ||| || || | | |||||| Sbjct 1210 TCAAGAATATCTGCCCTGTTAGTTGCTGCAATGACAATAATGCCAGTGTTACCCTCAAAA 1269 Query 9285 CCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 9344 |||||||| ||||| ||||| ||||||| || || || | ||| ||||| | | | Sbjct 1270 CCATCCATTTCTGTTAAAAGCTGGTTAAGTGTCTGCTCTCTTTCGTCATT---TCCCCCA 1326 Query 9345 CCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACAT 9401 ||| |||| | | ||| | || || |||||||| ||||||| || ||||| ||| Sbjct 1327 CCAATTCCAGTTCCTCTTTGTCTACCAACAGCATCAATTTCATCAACAAACACAATGCAT 1386 Query 9402 GGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACA 9461 || ||| || || | | || ||||| | || | || || ||||||||| Sbjct 1387 GGGGCATTATCCTTAGCTTTCTTGAAAAGATCCCTGACTCGAGAAGCACCAACACCAACA 1446 Query 9462 AACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGC 9520 |||||||| ||||| | | | ||| || | | ||| || ||| || |||||| || Sbjct 1447 AACATCTCAACAAACTCAGAACCAGAA-ATGGAAAAGAATGGAACACCAGCTTCACCAGC 1505 Query 9521 AATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTG 9555 ||| || ||| ||||||||||| || || |||| Sbjct 1506 AATCGCCTTGGCTAGAAGAGTCTTTCCAGTTCCTG 1540 >seq101798 Length=623 Score = 109 bits (120), Expect = 6e-19 Identities = 247/365 (68%), Gaps = 6/365 (2%) Strand=Plus/Minus Query 9195 TCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGCG 9254 ||||| | ||||| | ||| || || |||||| || ||| |||||| || || || Sbjct 374 TCAAATCTTCCTGGTCTAAGCAGAGCAGAATCAAGTATTTCAGGGCGATTTGTAGCAGCA 315 Query 9255 ATGACAA-CAATAC-CTGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAA 9312 ||||||| || | | ||||| | | |||||||||||| || |||| | ||||| | Sbjct 314 ATGACAATCACTCCACTGTTACC--ACTAAAACCATCCATTTCAGTCAGCAACTGGTTTA 257 Query 9313 TAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGCTTTCCCACGG 9372 || ||||||| ||||||||| || | ||||| | | ||| ||||||| | Sbjct 256 GCGTCTGTTCCCTCTCATCATTCCCTCCACCAATACCAGTTCCTCTCTGCCTTCCCACAG 197 Query 9373 CATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGAT 9432 | ||||||||||| || || || | |||||| |||| | ||| | | || | | Sbjct 196 CGTCAATCTCATCGATAAACACCAGACATGGAGCATTTGCCTTGGCCTTGTTGAACAAGT 137 Query 9433 CGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATT 9492 | | || ||| || |||||||||||||||||||| | || | || | | ||| | Sbjct 136 CCCTCACTCTTGAAGCCCCCACACCAACAAACATCTCGATGAACTCTGATCCTG-ACAGT 78 Query 9493 G-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTA 9551 | | ||| || || | || ||| || || || || ||| || | ||||| || || Sbjct 77 GAAAAGAAAGGAACTTCAGCTTCTCCAGCTATTGCCTTGGCTAGCAAGGTCTTCCCAGTC 18 Query 9552 CCTGG 9556 ||||| Sbjct 17 CCTGG 13 >seq88759 Length=3029 Score = 93.3 bits (102), Expect = 5e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 106456 TGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAA 106515 ||| || || |||||||||||||| || ||||| || || | ||| ||||| | Sbjct 2151 TGGTAGAGCAATTGATGCCAAATTACACACAGCAGTTTCTGTTGGACTTGTATACTCAAT 2092 Query 106516 AATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTT 106575 ||| || |||||||| || ||| ||||| || |||||||||| |||||||||||| | Sbjct 2091 AATCTCCGTACACAAATTTGAAGATTTAATGGTGCCCAAATTCTGCTGGTTACTCTTTCT 2032 Query 106576 GTTGCACGCATCCT 106589 ||||| | ||||| Sbjct 2031 ATTGCAAGAATCCT 2018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588255017662880