Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_015279.1 Length=190789 Score E Sequences producing significant alignments: (Bits) Value seq98 634 7e-177 seq28 578 5e-160 seq258 87.8 2e-12 seq24621 84.2 3e-11 >seq98 Length=41871 Score = 634 bits (702), Expect = 7e-177 Identities = 740/994 (74%), Gaps = 4/994 (0%) Strand=Plus/Minus Query 179748 TTCTGCGAGTGGGTAACCTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTTCTG 179807 ||||| | ||| ||||| ||| | ||||| || || | || ||||| || ||| || Sbjct 41566 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 41507 Query 179808 ATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCATCGCTGCTCC 179866 ||||| || ||| | ||| | |||||| |||| || || |||| ||||| ||||| || Sbjct 41506 ATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCCC 41448 Query 179867 CCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 179926 || || || || ||||| || ||||||||||| |||| || | | || || ||||| Sbjct 41447 TCCAGTAGATATTGATGGTATTCGTGAACCCGTTTCTGGATCTTTACTTTACGGAAACAA 41388 Query 179927 CATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 179986 || || |||||||| || ||||| |||| ||| || ||| | ||||| || || || Sbjct 41387 TATTATTTCTGGTGCCATTATTCCTACTTCTGCCGCTATAGGTTTGCACTTTTACCCAAT 41328 Query 179987 CTGGGAAGCCGCATCGCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCCAACTTGTCGT 180046 |||||||| ||||| |||| || ||| | || ||||| ||||||| |||| | || Sbjct 41327 ATGGGAAGCTGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGT 41268 Query 180047 CTTCCACTTCCTGATTGGCATCTATGCCTACATGGGTCGTGAGTGGGAACTTTCTTATCG 180106 | |||||| | |||| | | |||||||| ||||||||||||||| || || Sbjct 41267 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGCCGTGAGTGGGAACTTAGTTTCCG 41208 Query 180107 CTTGGGTATGCGCCCCTGGATCTGC-GTAGCATATTCTGCTCCAGTCGCTGCAGCATCTG 180165 |||||||||||||| ||||| ||| || |||||||| ||||| || || ||||| | | Sbjct 41207 TTTGGGTATGCGCCCTTGGAT-TGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCTACCG 41149 Query 180166 CTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCATTCTCTGACGCAATGCCCCTCGGCA 180225 |||| ||| | | || || | |||||||| || || |||| ||||| | || | Sbjct 41148 CTGTCTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCGGACGGTATGCCTTTAGGAA 41089 Query 180226 TTTCTGGCACCTTCAACTACATGCTTGTTTTCCAAGCAGAGCACAACATCCTGATGCACC 180285 | ||||| || ||||||| ||| |||| ||||| || |||||||||||||| ||||||| Sbjct 41088 TCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACC 41029 Query 180286 CCTTCCACATGCTGGGAGTAGCAGGTGTCTTCGGCGGTTCACTGTTCTCCGCAATGCACG 180345 | || || ||| | || ||||| ||||| |||||||| || || ||| || ||||| | Sbjct 41028 CATTTCATATGTTAGGCGTAGCGGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATG 40969 Query 180346 GTTCACTGGTTACCTCTTCACTGGTTCGTGAAACCACTGAAACTGAGTCCCAGAACTACG 180405 |||| |||| ||||| || | | ||||| || |||| ||| || || | | Sbjct 40968 GTTCCTTGGTAACCTCAAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAG 40909 Query 180406 GTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCACATGGATACTTCG 180465 ||||||| ||||||||||||| || || || || ||||| || || ||||| || || | Sbjct 40908 GTTACAAATTTGGTCAAGAAGGGGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTG 40849 Query 180466 GTCGTCTGATCTTCCAGTATGCATCGTTCAACAACTCCCGTTCACTTCACTTCTTCCTGG 180525 | || |||||||||| ||||| ||||||||||| |||||| | ||||||||||| | Sbjct 40848 GCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCATTACACTTCTTCCTAG 40789 Query 180526 CAGCATGGCCTGTCGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCA 180585 | || |||||||| | || ||||||||||| || | || | ||||| ||||| |||| Sbjct 40788 CTGCTTGGCCTGTAATAGGTATCTGGTTCACCGCTTTAGGTATTAGCACTATGGCTTTCA 40729 Query 180586 ACCTCAACGGTTTCAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGTGTGCTCAACA 180645 || | || |||||||| |||||||| ||| | ||||| ||||||||||||| | || | Sbjct 40728 ACTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAATA 40669 Query 180646 CTTGGGCAGACGTACTCAACCGCGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAATG 180705 ||||||| || | ||||||| ||| || ||||||||||||||||| || ||||||| Sbjct 40668 CTTGGGCTGATATTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 40609 Query 180706 CTCACAACTTCCCACTTGACCTGGCAGCTGCTGA 180739 ||||||||||||| || ||||| || |||| ||| Sbjct 40608 CTCACAACTTCCCTCTAGACCTAGCTGCTGTTGA 40575 >seq28 Length=37419 Score = 578 bits (640), Expect = 5e-160 Identities = 741/1018 (73%), Gaps = 10/1018 (1%) Strand=Plus/Minus Query 181424 TTTGACATCCTTGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGGA 181483 ||||| || | ||||||||| | | ||||| ||||| || || || ||||| || Sbjct 31329 TTTGATATTATGGATGACTGGTTGCGGAGGGACCGTTTTGTTTTCGTAGGTTGGTCCGGT 31270 Query 181484 CTACTTCTTTTTCCCACTGCTTATCTTGCAATTGGGGGCTGGCTCACTGGCACTACTTTT 181543 ||| | || ||||| ||| || |||| | ||||| ||| |||| || || |||||| Sbjct 31269 CTATTGCTCTTTCCTTGTGCCTACTTTGCTTTAGGGGGTTGGTTCACAGGTACAACTTTT 31210 Query 181544 GTTACGTCGTGGTACACCCACGGATTGGCGTCTTCCTACCTTGAGGG-TGCTAATTTCCT 181602 || || || ||||| ||||| |||||||| ||||| | || || ||| || ||| | Sbjct 31209 GTAACCTCCTGGTATACCCATGGATTGGCCAGCTCCTATTTGGAAGGCTGC-AACTTCTT 31151 Query 181603 TACAGCGGCTGTGTCAACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGGG 181662 || || || || || || |||||| | | | | |||||| | | |||| ||||| Sbjct 31150 AACCGCTGCAGTTTCTACCCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGG 31091 Query 181663 TCCTGAAGCTCAGGGCGATTTCGTCCGCTGGGTCCAACTTGGGGGACTCTGGGCTTTTGT 181722 ||||||||| || || ||||| || ||| ||| | || || || ||| ||||||| Sbjct 31090 TCCTGAAGCGCAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGT 31031 Query 181723 GGCGCTCCACGGAGCCTTCGCTCTTATCGGTTTTATGCTCAGGCAATTTGAACTTGCTCG 181782 || ||||||||||| |||| || || ||||||||| | | ||||||||| ||||||| Sbjct 31030 TGCTCTCCACGGAGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAAATTGCTCG 30971 Query 181783 TCTAATCGG----AATCCGACCCTACAATGCGATTGCTTTTTCCGGTCCTATTGCTGTAT 181838 ||| | | | ||||| || ||||| || || ||||| ||||| |||||||| | Sbjct 30970 ----ATCCGTGCAATTGCGACCTTATAATGCAATCGCATTTTCTGGTCCAATTGCTGTTT 30915 Query 181839 TCGTCTCTGTATTTCTCATCTATCCTCTGGGACAATCCAGTTGGTTCTTTGCGCCGAGTT 181898 | || |||||||| || || ||||| || || |||||| ||||||||||||| || |||| Sbjct 30914 TTGTTTCTGTATTCCTGATTTATCCGCTAGGTCAATCCGGTTGGTTCTTTGCACCTAGTT 30855 Query 181899 TCGGTGTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGC 181958 | ||||| || || || || || ||| | || || |||| || |||||||||||||| | Sbjct 30854 TTGGTGTAGCAGCTATATTTCGATTCATCCTGTTTTTCCAAGGGTTTCATAATTGGACAC 30795 Query 181959 TCAATCCCTTCCATATGATGGGTGTTGCTGGTATCCTGGGTGGCGCATTACTCTCTGCAA 182018 | || || || ||||||||||| ||||||||| | |||| | || | || | || | Sbjct 30794 TGAACCCGTTTCATATGATGGGAGTTGCTGGTGTATTGGGCGCGGCTCTGCTGTGCGCTA 30735 Query 182019 TTCACGGTGTGACCGTGGAGAATACTCTGTATCAAGACGGTGACCAAGCAAATACTTTCA 182078 |||| |||| || || || |||||| | | | |||||||||| |||||||| ||| Sbjct 30734 TTCATGGTGCTACTGTCGAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTCC 30675 Query 182079 AAGCATTCGATTCAACTCAAGAAGAAGAAACCTATTCAATGGTTACAGCGAACCGCTTCT 182138 || || | ||||||||| |||||||| ||||||||||| || || |||||||| | Sbjct 30674 GCGCTTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCCAACCGCTTTT 30615 Query 182139 GGTCTCAGATCTTCGGTATTGCGTTTAGCAATAAGAGGTGGTTGCATTTCTTTATGCTCT 182198 |||| || ||||| || |||| ||| |||||| | ||||| |||||||||||| | | Sbjct 30614 GGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTAT 30555 Query 182199 TTGTTCCTGTTATGGGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACC 182258 |||| || || | ||| | |||| || | | || | | ||||| ||||| |||| Sbjct 30554 TTGTACCAGTAACTGGTTTATGGATGAGCGCTCTTGGAGTAGTAGGTCTGGCTCTGAACC 30495 Query 182259 TTCGTGCTTATGACTTTGTATCCCAAGAAATCAGAGCATCAGAAGACCCAGAGTTCGAGA 182318 | ||||| |||||||| || || || |||||| | ||| | ||||| || || || |||| Sbjct 30494 TGCGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGA 30435 Query 182319 CGTTCTACACAAAGAACATTCTCTTGAATGAAGGTCTGCGTGCATGGTTAGCACCAGTCG 182378 | ||||| || || || ||||| || |||||||| | ||||| ||| | || | | Sbjct 30434 CTTTCTATACCAAAAATATTCTTTTAAATGAAGGCATTCGTGCTTGGATGGCGGCTCAAG 30375 Query 182379 ATCAACCACATGAGAACTTTGTGTTCCCTGAGGAAGTATTACCCAGAGGTAACGCACT 182436 |||| || ||||| ||| || | ||||| ||||| || ||||| | || ||||| || Sbjct 30374 ATCAGCCTCATGAAAACCTTATATTCCCCGAGGAGGTTCTACCCCGTGGAAACGCTCT 30317 >seq258 Length=11790 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 141254 TTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAAT 141313 |||||||||||||||| || ||||| | || ||||||| | |||||||||||||| ||| Sbjct 4842 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCGAAT 4901 Query 141314 CCTACCTGGGGAG 141326 ||||| ||||||| Sbjct 4902 CCTACTTGGGGAG 4914 >seq24621 Length=2300 Score = 84.2 bits (92), Expect = 3e-11 Identities = 134/187 (72%), Gaps = 4/187 (2%) Strand=Plus/Minus Query 171909 CTGGACGCTGCAGATGAAGCGGGGGTTGATGCT-CCATATTCCTGCCGTGCCGGTGCCTG 171967 ||||| || || || || || || ||||| ||| |||||||||||| | ||||| || || Sbjct 2233 CTGGATGCAGCCGAGGATGCTGGAGTTGA-GCTGCCATATTCCTGCAGGGCCGGGGCATG 2175 Query 171968 TTCCAGCTGTGCTGGTAAACTTGAGAGTGGTACGGTAGATCAGTCAGAGCAATCTTTCCT 172027 || | ||||||||| || ||| | || || || || ||||| || || ||||| Sbjct 2174 CTCTACCTGTGCTGGGAAGATTGCGTCGGGCACAGTCGACCAGTCCGATGGTTCCTTCCT 2115 Query 172028 TGATGATGATCAAATGGACGCAGGATT-CGTTCTGACCTGTGTTGCTTATCCTACAAGCG 172086 ||||| ||||| | || |||| || | | |||||||| ||| | || || || | Sbjct 2114 CGATGAGAATCAAGT-GAATCAGGGTTACTTGCTGACCTGCGTTTCATACCCAACTTCAG 2056 Query 172087 ATTGTGT 172093 ||||||| Sbjct 2055 ATTGTGT 2049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608611297800480