Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq98 526 3e-144 seq28 389 5e-103 seq69091 118 1e-21 seq28336 89.7 6e-13 >seq98 Length=41871 Score = 526 bits (582), Expect = 3e-144 Identities = 690/953 (72%), Gaps = 2/953 (0%) Strand=Plus/Minus Query 169442 TTGGTTGGTTTGGTGTTCTAATGATTCCATGCTTACTCACAGCAGCAGCATGT-TTCATC 169500 |||| |||||||||||| | ||||| || ||| | || ||| | | ||| || || Sbjct 41526 TTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACTTC-TGTATTTATT 41468 Query 169501 GTTGCATTCATTGCAGCACCTCCTGTCGATATCGACGGAATCAGAGAACCAGTAGCGGGT 169560 | || |||||||| || ||||| || ||||| || || || | ||||| || | || Sbjct 41467 ATCGCTTTCATTGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAACCCGTTTCTGGA 41408 Query 169561 TCTTTCTTGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCTATC 169620 ||||| | || || ||||| || || |||||||| || |||| | || |||||| Sbjct 41407 TCTTTACTTTACGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTCTGCCGCTATA 41348 Query 169621 GGACTACACTTCTACCCAATCTGGGAAGCAGCAACTGTTGATGAATGGTTGTATAATGGT 169680 || | ||||| |||||||| |||||||| ||| | |||||||||||||| || || || Sbjct 41347 GGTTTGCACTTTTACCCAATATGGGAAGCTGCATCCGTTGATGAATGGTTATACAACGGC 41288 Query 169681 GGTCCTTATCAGTTGGTAATCTTCCACTTCCTTATTGGTATCTCAGCATACATGGGAAGA 169740 ||||||||| | | | | | |||||| | ||||| | | |||||||| | Sbjct 41287 GGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGCCGT 41228 Query 169741 CAGTGGGAACTATCATACAGATTAGGAATGCGTCCTTGGATCTGTGTTGCATACTCTGCA 169800 |||||||||| | | | || || ||||| |||||||| ||||||||| || || Sbjct 41227 GAGTGGGAACTTAGTTTCCGTTTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCT 41168 Query 169801 CCAGTATCTGCTGCATTCGCTGTATTCTTAGTATACCCATTTGGTCAGGGTTCATTCTCT 169860 || || | || || |||||| ||||| | |||||| ||||||| || || || Sbjct 41167 CCTGTTGCAGCAGCTACCGCTGTCTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCG 41108 Query 169861 GATGGTATGCCACTAGGTATCTCAGGTACTTTCAACTTTATGTTCGTTTTCCAAGCAGAG 169920 || |||||||| |||| ||||| |||||||||||||||||| | || ||||| || ||| Sbjct 41107 GACGGTATGCCTTTAGGAATCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAG 41048 Query 169921 CATAACATTCTAATGCATCCTTTCCACATGGCAGGAGTAGCAGGAATGTTCGGAGGATCT 169980 || ||||| || ||||| || || || ||| ||| ||||| || | ||||| || || Sbjct 41047 CACAACATCCTTATGCACCCATTTCATATGTTAGGCGTAGCGGGTGTATTCGGCGGCTCC 40988 Query 169981 TTATTCTCAGCAATGCATGGTTCACTTGTTACTTCATCTCTAATCAGAGAAACAACAGAG 170040 ||||| || ||||||||||| | || || ||| | | ||||| ||||| ||||| Sbjct 40987 CTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCAAGTTTGATCAGGGAAACTACAGAA 40928 Query 170041 CAAGAGTCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAAACATACAACATAGTA 170100 | || || || | ||||| || || || ||||||| ||||| || || || ||| Sbjct 40927 AATGAATCTGCTAATGAAGGTTACAAATTTGGTCAAGAAGGGGAAACTTATAATATCGTA 40868 Query 170101 GCAGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCATTCAACAACTCAAGA 170160 || || || ||||| ||||| || | |||||||| |||||| ||||||||||| | Sbjct 40867 GCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGT 40808 Query 170161 AGTCTACACTTCTTCCTAGCAGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGT 170220 |||||||||||||||| | || ||||| || || | ||||| ||| || | ||| Sbjct 40807 TCATTACACTTCTTCCTAGCTGCTTGGCCTGTAATAGGTATCTGGTTCACCGCTTTAGGT 40748 Query 170221 ATCTGCACAATGGCATTCAACTTGAATGGTTTCAACTTTAACCAATCAGTTGTTGATGCT 170280 || |||| ||||| |||||||| ||||||||||| || |||||||| || |||||| | Sbjct 40747 ATTAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGT 40688 Query 170281 AACGGAAAAATCGTCCCAACATGGGGTGATGTTCTAAACAGAGCAAACTTGGGTATGGAA 170340 | || | | || |||| |||| || | ||| | || ||| | ||||||||| Sbjct 40687 CAAGGTCGTGTAATTAATACTTGGGCTGATATTATCAACCGTGCTAACCTTGGTATGGAA 40628 Query 170341 GTTATGCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGCATCTGCTGA 170393 |||||||||||| | ||||| ||||||||||| ||||||||||| ||| ||| Sbjct 40627 GTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGA 40575 >seq28 Length=37419 Score = 389 bits (430), Expect = 5e-103 Identities = 710/1040 (68%), Gaps = 25/1040 (2%) Strand=Plus/Minus Query 170529 TTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTTGTATTCATAGGATGGTCTGGT 170588 |||||| || | || |||||||| ||| || |||||||| ||| |||| ||||| ||| Sbjct 31329 TTTGATATTATGGATGACTGGTTGCGGAGGGACCGTTTTGTTTTCGTAGGTTGGTCCGGT 31270 Query 170589 CTTTTACTTCTGCCTTGTGCATACCTATCAATCGGTGGTTGGTTCTTAGGGACTACCTTC 170648 || || || | |||||||| ||| | | | || ||||||||| ||| || || || Sbjct 31269 CTATTGCTCTTTCCTTGTGCCTACTTTGCTTTAGGGGGTTGGTTCACAGGTACAACTTTT 31210 Query 170649 GTTACATCATGGTATACACATGGTGTTGCTTCCTCATATCTTGAGGGATGTAACTTCCTA 170708 || || || |||||||| ||||| | || ||| ||| | || || || |||||| || Sbjct 31209 GTAACCTCCTGGTATACCCATGGATTGGCCAGCTCCTATTTGGAAGGCTGCAACTTCTTA 31150 Query 170709 ACAGCAGCAGTTTCCACACCTGGCGACGCAATGGGTCATAGTCTTCTGTTCCTTTGGGGA 170768 || || |||||||| || |||| | | | ||| | | |||| || ||||| Sbjct 31149 ACCGCTGCAGTTTCTACCCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGT 31090 Query 170769 CCTGAAGCACAAGGTTCATTTGTTCGTTGGTTACAACTCGGAGGTTTATGGAACTTTGTA 170828 |||||||| ||||| ||| |||||||| ||| | || ||| | |||| ||||| Sbjct 31089 CCTGAAGCGCAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTT 31030 Query 170829 GCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCAGACAATTTGAGATCGCAGGA 170888 || | || |||| || ||||| |||||||| ||| | | |||||||| || || || Sbjct 31029 GCTCTCCACGGAGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAAATTGCTCGA 30970 Query 170889 CTTGTAGGCA--TCAGACCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGTCTTCA 170946 || ||| | ||||||| || ||| ||||||| |||| | || || || || Sbjct 30969 TCCGT--GCAATTGCGACCTTATAATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTG 30912 Query 170947 CTAGCATCTTTCTGATCTATCCACTAGGTCAGCACAGTTGGTTCTTCGCACCATCATTCG 171006 | | || ||||| ||||| |||||||| | |||||||||| ||||| || | Sbjct 30911 TTTCTGTATTCCTGATTTATCCGCTAGGTCAATCCGGTTGGTTCTTTGCACCTAGTTTTG 30852 Query 171007 GTGTCGCAGCAATTTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTACATTGA 171066 |||| ||||| || ||||| | ||| | || | ||||| || || || ||| ||| Sbjct 30851 GTGTAGCAGCTATATTTCGATTCATCCTGTTTTTCCAAGGGTTTCATAATTGGACACTGA 30792 Query 171067 ATCCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTATTATGTGCCATTC 171126 | || ||||| |||||||| ||||| || || | || | || | | || || |||| Sbjct 30791 ACCCGTTTCATATGATGGGAGTTGCTGGTGTATTGGGCGCGGCTCTGCTGTGCGCTATTC 30732 Query 171127 ATGGTGCAACAGTGCAGAACACATTGTATGAAGACACATCAGTTTATACTGATAATAAAA 171186 ||||||| || || | || || || | ||||||| | | || || Sbjct 30731 ATGGTGCTACTGTCGAAAATACTTTATTTGAAGAC------GGTGATGGTG--------- 30687 Query 171187 TTCAAAGCACAACATTCCGTGCCTTTGATCCTACACAGGAAGAAGAAACTTACAGTATGA 171246 |||| |||||||| || ||| | || || || | ||||||||||| ||| Sbjct 30686 --CAAA----TACATTCCGCGCTTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGG 30633 Query 171247 TTACAGCAAACAGATTCTGGTCACAGATATTTGGTATTGCTTTCTCTAACAAAAGATTTT 171306 | || || ||| | || ||||| || || ||||| ||||||| || || ||| | | | Sbjct 30632 TCACCGCCAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGT 30573 Query 171307 TACACTTCCTTATGTTGTTCGTTCCTGTCATGGGTATGTGGACATCATCTATAGGTATCG 171366 |||| ||| ||||||| || || || || | ||| | |||| || | || | | Sbjct 30572 TACATTTCTTTATGTTATTTGTACCAGTAACTGGTTTATGGATGAGCGCTCTTGGAGTAG 30513 Query 171367 TAGGTCTAGCACTTAACCTCAGAGCATACGATTTTGTATCTCAAGAGATAAGAGCAGCAG 171426 ||||||| || || ||||| | || || || || || ||||| || || | ||||| | Sbjct 30512 TAGGTCTGGCTCTGAACCTGCGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGG 30453 Query 171427 AAGACCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATGAGAG 171486 |||| || || || ||||||||||| || || ||||| ||| | |||||||| || | | Sbjct 30452 AAGATCCTGAATTTGAGACTTTCTATACCAAAAATATTCTTTTAAATGAAGGCATTCGTG 30393 Query 171487 CATGGATGTCATCAGTTGACCAACCACATGAGAACTTCGTATTCCCAGAAGAAGTGTTAC 171546 | |||||| | | || || || ||||| ||| | ||||||| || || || ||| Sbjct 30392 CTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCCGAGGAGGTTCTAC 30333 Query 171547 CAAGAGGTAACGCACTTTAA 171566 | | || ||||| |||||| Sbjct 30332 CCCGTGGAAACGCTCTTTAA 30313 >seq69091 Length=3183 Score = 118 bits (130), Expect = 1e-21 Identities = 129/170 (76%), Gaps = 1/170 (1%) Strand=Plus/Plus Query 153264 GAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGA 153323 |||||||| ||||||||| ||||| || ||||| ||||||||||||||||| ||| Sbjct 1460 GAGAATCCAGCTTGGTACACCCAATACACGCCATATCAGGCTGAGATATCTCAGGGGAGA 1519 Query 153324 TTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCA 153383 ||||| |||| | || |||||||| | || || || || || ||| | || || || Sbjct 1520 TTGGAGTCTTTGCTTAACTACCAAACTGTGATAACTGATCTCACCGGACTGCCCATGTCA 1579 Query 153384 AACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAAT-GCTAT 153432 || || || ||| | ||||||| ||||| || || |||||||| ||||| Sbjct 1580 AATGCTTCCCTACTTGATGAAGGTACTGCTGCTGCTGAAGCAATGGCTAT 1629 Score = 109 bits (120), Expect = 6e-19 Identities = 163/227 (72%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 153747 GATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCAT 153806 ||||||| ||| ||| || ||||||||| |||| ||||| ||||| ||||||||| Sbjct 1940 GATATTGTTGTTGGTTCAGCTCAGAGGTTTGGTGTTCCAATGGGGTATGGTGGTCCTCAT 1999 Query 153807 GCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGT 153866 || || ||||| || ||| || | |||| ||||| | ||| ||||| |||||| | ||| Sbjct 2000 GCAGCTTTCTTGGCTACATCACAAGAGTACAAGAGGATGATGCCTGGAAGAATTATTGGT 2059 Query 153867 CAGTCAGTA--GATAGTGAAGGTAATAAAGCA-TACAGATTAGCACTACAGACTAGAGAG 153923 |||||| ||| | ||| || || ||| || || | || || ||||| Sbjct 2060 --GTCAGTGTTGATTCTACAGGGAAGCCTGCTCTACGTATGGCCA-TGCAAACAAGAGAA 2116 Query 153924 CAGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCA 153970 |||||||| | || || ||||| || || ||||||||||| || || Sbjct 2117 CAGCATATTCGCAGGGATAAAGCTACTAGCAACATCTGCACTGCCCA 2163 >seq28336 Length=2969 Score = 89.7 bits (98), Expect = 6e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 155018 TGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGGAGGTGG 155077 ||| || ||||| || ||||| || | ||||| ||||| || ||||| ||||||||||| Sbjct 2248 TGGAGCTGATGTTTGCCATCTTAATCTCCATAAGACATTTTGCATTCCCCATGGAGGTGG 2189 Query 155078 AGGTCCTGGCGTAGGTCCTATAGGTGTAGCAAAACATCTCACACCATTTGTA 155129 |||||||| | |||||||| ||||| |||||| | |||||||| || Sbjct 2188 TGGTCCTGGTATGGGTCCTATTGGTGTGAAGAAACATTTGGCACCATTTCTA 2137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577518515678080