Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_015281.1 Length=179563 Score E Sequences producing significant alignments: (Bits) Value seq98 594 6e-165 seq28 554 5e-153 >seq98 Length=41871 Score = 594 bits (658), Expect = 6e-165 Identities = 732/995 (74%), Gaps = 4/995 (0%) Strand=Plus/Minus Query 167862 TTTCTGCGAGTGGGTAAC-ATCAACTAACAACCGCCTCTATGTCGGTTGGTTCGGCGTAC 167920 |||||| | ||| |||| | || | || ||||| || || | || ||||| || || Sbjct 41567 TTTCTGTAACTGGATAACCAGCACCGAA-AACCGTCTTTACATTGGATGGTTTGGTGTTT 41509 Query 167921 TGATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCT 167979 ||||||| || ||| | ||| | |||||| ||||| || || |||| ||| | ||||| Sbjct 41508 TGATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCC 41450 Query 167980 CCCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAAC 168039 || || || || || || || || ||||||||||| |||| || | | || || ||| Sbjct 41449 CCTCCAGTAGATATTGATGGTATTCGTGAACCCGTTTCTGGATCTTTACTTTACGGAAAC 41390 Query 168040 AACATCATCTCTGGTGCAGTTGTCCCTTCTTCTAATGCTATTGGACTTCACTTCTATCCC 168099 || || || |||||||| || | ||| ||||| ||||| || | ||||| || || Sbjct 41389 AATATTATTTCTGGTGCCATTATTCCTACTTCTGCCGCTATAGGTTTGCACTTTTACCCA 41330 Query 168100 ATCTGGGAAGCAGCATCACTCGATGAGTGGTTGTATAACGGTGGTCCTTTCCAACTAGTA 168159 || |||||||| ||||| | ||||| ||||| || ||||| ||||||| ||||| | Sbjct 41329 ATATGGGAAGCTGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATT 41270 Query 168160 GTCTTTCACTTCCTCATCGGTATCTATGCATACATGGGACGTGAATGGGAACTTTCATAT 168219 || | |||||| | | ||| | | |||||||| ||||| ||||||||| | Sbjct 41269 GTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGCCGTGAGTGGGAACTTAGTTTC 41210 Query 168220 CGTTTAGGTATGCGTCCATGGATCTGTGTTGCATACTCTGCACCAGTCGCTGCAGCGAGT 168279 ||||| |||||||| || ||||| ||||||||| || || || || || ||||| | Sbjct 41209 CGTTTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCTACC 41150 Query 168280 GCAGTATTCCTAGTGTATCCTTTCGGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGGA 168339 || || ||| | | || || | |||||||| || || || || | ||||| | ||| Sbjct 41149 GCTGTCTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCGGACGGTATGCCTTTAGGA 41090 Query 168340 ATCTCAGGAACATTCAACTACATGTTGGTCTTCCAAGCTGAGCACAATATTCTCATGCAT 168399 ||||| || || ||||||| ||| | || ||||| ||||||||||| || || ||||| Sbjct 41089 ATCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCAC 41030 Query 168400 CCCTTCCATATGCTCGGCGTTGCTGGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGCAC 168459 || || |||||| | ||||| || || ||||| || ||| | || ||||||||||| Sbjct 41029 CCATTTCATATGTTAGGCGTAGCGGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCAT 40970 Query 168460 GGAAGTTTGGTTACTTCTTCTCTCGTTAGAGAGACGACTGAAACCGAATCCCAAAACTAC 168519 || ||||| || || | | | || || || || |||| ||||| || | Sbjct 40969 GGTTCCTTGGTAACCTCAAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAA 40910 Query 168520 GGTTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTC 168579 |||||||| || || ||||||| ||||| || || |||||||||||||||||||| || Sbjct 40909 GGTTACAAATTTGGTCAAGAAGGGGAAACTTATAATATCGTAGCCGCTCATGGTTATTTT 40850 Query 168580 GGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTT 168639 || || |||||||||||||| ||| ||||||||||| || || || ||||||||||| Sbjct 40849 GGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCATTACACTTCTTCCTA 40790 Query 168640 GCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTC 168699 ||||| |||||||| | || |||||||||||||| | || | ||| ||||| ||| Sbjct 40789 GCTGCTTGGCCTGTAATAGGTATCTGGTTCACCGCTTTAGGTATTAGCACTATGGCTTTC 40730 Query 168700 AACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAAC 168759 ||| | || |||||||| |||||||| ||| | ||||| |||| |||||||| | || Sbjct 40729 AACTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAAT 40670 Query 168760 ACCTGGGCAGATGTTCTGAACCGCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAAC 168819 || ||||| ||| || | ||||| ||| || |||||||||||||||||||| ||||| Sbjct 40669 ACTTGGGCTGATATTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAAT 40610 Query 168820 GCACACAACTTCCCACTCGATCTTGCTGCTGCTGA 168854 || ||||||||||| || || || ||||||| ||| Sbjct 40609 GCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGA 40575 >seq28 Length=37419 Score = 554 bits (614), Expect = 5e-153 Identities = 733/1014 (72%), Gaps = 2/1014 (0%) Strand=Plus/Minus Query 169307 TTCGATGTTCTCGATGACTGGCTCAAACGCGACCGCTTTGTATTCATTGGTTGGTCTGGT 169366 || ||| || | ||||||||| | | ||||| ||||| ||| | |||||||| ||| Sbjct 31329 TTTGATATTATGGATGACTGGTTGCGGAGGGACCGTTTTGTTTTCGTAGGTTGGTCCGGT 31270 Query 169367 CTACTTCTTCTTCCCACTGCCTATCTTGCTATTGGAGGGTGGCTCACTGGTACAGCGTTT 169426 ||| | || |||| |||||| ||||| | || || ||| |||| |||||| | ||| Sbjct 31269 CTATTGCTCTTTCCTTGTGCCTACTTTGCTTTAGGGGGTTGGTTCACAGGTACAACTTTT 31210 Query 169427 GTTACTTCCTGGTACACCCACGGACTCGCTTCCAGTTACTTAGAAGGCGCTAACTTCCTC 169486 || || |||||||| ||||| ||| | || | || || |||||| |||||| | Sbjct 31209 GTAACCTCCTGGTATACCCATGGATTGGCCAGCTCCTATTTGGAAGGCTGCAACTTCTTA 31150 Query 169487 ACTGCTGCTGTCAGTACACCTGCTGACGCTATGGGACACTCACTGCTCTTGCTATGGGGT 169546 || ||||| || ||| |||||| | | | | ||| || || | || ||||||||| Sbjct 31149 ACCGCTGCAGTTTCTACCCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGT 31090 Query 169547 CCAGAAGCACAAGGCGATTTCGTTCGCTGGTGTCAATTGGGTGGTCTCTGGAACTTTGTA 169606 || ||||| ||||| ||||| ||| ||||||||||| |||||||| |||| ||||| Sbjct 31089 CCTGAAGCGCAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTT 31030 Query 169607 GCACTTCATGGTGCATTTGCATTGATTGGTTTCATGCTTAGGCAGTTTGAATTGGCACGT 169666 || || || || || || | | | || ||||| ||| | | || |||||| | || || Sbjct 31029 GCTCTCCACGGAGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAAATTGCTCGA 30970 Query 169667 CTTATTGGCATC-CGTCCTTATAATGCTATTGCATTCTCTGGTCCTATTGCTGTATTTGT 169725 | || || || ||||||||||| || ||||| |||||||| |||||||| ||||| Sbjct 30969 -TCCGTGCAATTGCGACCTTATAATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGT 30911 Query 169726 CAGTGTCTTTCTTATCTACCCACTTGGACAGTCCTCATGGTTCTTTGCTCCCTCCTTTGG 169785 ||| || || || || || || || || ||| ||||||||||| || ||||| Sbjct 30910 TTCTGTATTCCTGATTTATCCGCTAGGTCAATCCGGTTGGTTCTTTGCACCTAGTTTTGG 30851 Query 169786 AGTATCAGCAATCTTCAGGTTCCTGTTGTTCCTGCAAGGATTCCACAACTGGACGTTGAA 169845 ||| |||| || || | ||| | |||| | ||||| || || || ||||| |||| Sbjct 30850 TGTAGCAGCTATATTTCGATTCATCCTGTTTTTCCAAGGGTTTCATAATTGGACACTGAA 30791 Query 169846 TCCATTCCACATGATGGGTGTAGCAGGAATCTTGGGCGGAGCATTGCTTTCTGCTATCCA 169905 || || || |||||||| || || || | ||||||| || |||| | ||||| || Sbjct 30790 CCCGTTTCATATGATGGGAGTTGCTGGTGTATTGGGCGCGGCTCTGCTGTGCGCTATTCA 30731 Query 169906 TGGTGTTACAGTAGAGAACACATTGTATGAAGACGGTGAGCAGGCAAATACTTTCAAGGC 169965 ||||| ||| || || || || || | |||||||||||| |||||||| ||| || Sbjct 30730 TGGTGCTACTGTCGAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTCCGCGC 30671 Query 169966 GTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTC 170025 ||| | | || || | ||||| |||||||| |||||||| || |||||||| ||||| Sbjct 30670 TTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCCAACCGCTTTTGGTC 30611 Query 170026 GCAGATCTTCGGTATTGCGTTTTCTAACAAGCGTTGGCTTCATTTTTTCATGTTGTTTGT 170085 || ||||| || |||| ||||| || || |||||| | ||||| || ||||| ||||| Sbjct 30610 CCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 30551 Query 170086 GCCTGTTATGGGTCTTTGGACATCCTCTATTGGCATTATTGGCCTTGCTCTCAATCTTCG 170145 || || | ||| | |||| | || |||| | | || || ||||| || || || Sbjct 30550 ACCAGTAACTGGTTTATGGATGAGCGCTCTTGGAGTAGTAGGTCTGGCTCTGAACCTGCG 30491 Query 170146 TGCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACCTT 170205 ||| || || ||||| |||||| ||| | ||||| |||||||| ||||||||||| || Sbjct 30490 TGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTT 30431 Query 170206 CTACACCAAAAACATCCTATTGAATGAAGGACTTCGTGCATGGTTGGCACCTGCTGATCA 170265 ||| |||||||| || || || |||||||| ||||||| ||| |||| || ||||| Sbjct 30430 CTATACCAAAAATATTCTTTTAAATGAAGGCATTCGTGCTTGGATGGCGGCTCAAGATCA 30371 Query 170266 ACCACATGAAAACTTCATCTTCCCAGAAGAAGTTCTTCCGAGAGGTAACGCACT 170319 || ||||||||| | || ||||| || || ||||| || | || ||||| || Sbjct 30370 GCCTCATGAAAACCTTATATTCCCCGAGGAGGTTCTACCCCGTGGAAACGCTCT 30317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572793178548960