Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_015282.1 Length=174079 Score E Sequences producing significant alignments: (Bits) Value seq98 675 0.0 seq28 538 4e-148 >seq98 Length=41871 Score = 675 bits (748), Expect = 0.0 Identities = 731/966 (76%), Gaps = 2/966 (0%) Strand=Plus/Minus Query 163812 AACCGCCTCTATGTTGGTTGGTTCGGCGTTCTGATGATCCCTACGCTGCTTGCAGCAACC 163871 ||||| || || |||| ||||| || ||| ||||||||||||| | | | ||||| Sbjct 41539 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT 41480 Query 163872 ATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGATGGTATTCGTGA 163930 ||||| || || |||| ||| | ||||| || || || || || |||||||||||||| Sbjct 41479 -TCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGA 41421 Query 163931 ACCTGTTGCAGGTTCGCTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCCTC 163990 ||| ||| | || || | | || || ||||| || || |||||||| || |||| | Sbjct 41420 ACCCGTTTCTGGATCTTTACTTTACGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 41361 Query 163991 GTCCAATGCAATTGGTCTTCACTTCTACCCCATTTGGGAAGCCGCATCCCTTGATGAATG 164050 || || || ||| | ||||| ||||| || |||||||| |||||| |||||||||| Sbjct 41360 TTCTGCCGCTATAGGTTTGCACTTTTACCCAATATGGGAAGCTGCATCCGTTGATGAATG 41301 Query 164051 GCTTTACAACGGTGGTCCTTTCCAACTTGTCGTCTTCCACTTCCTGATCGGTATCTATGC 164110 | | |||||||| ||||||| |||| | || | |||||| | | ||| | | Sbjct 41300 GTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTG 41241 Query 164111 ATACATGGGTCGTGAGTGGGAACTGTCTTACCGTCTTGGTATGCGTCCTTGGATTTGTGT 164170 |||||||| |||||||||||||| || |||| | |||||||| ||||||||| ||| Sbjct 41240 TTACATGGGCCGTGAGTGGGAACTTAGTTTCCGTTTGGGTATGCGCCCTTGGATTGCTGT 41181 Query 164171 TGCTTACTCTGCACCCGTTGCAGCAGCATCCGCAGTCTTCCTGGTCTATCCTTTCGGTCA 164230 ||| || || || || ||||||||||| |||| |||||| || | || || | ||||| Sbjct 41180 TGCATATTCAGCTCCTGTTGCAGCAGCTACCGCTGTCTTCTTGATTTACCCAATTGGTCA 41121 Query 164231 AGGTTCGTTCTCTGACGCAATGCCCCTGGGCATCTCTGGCACCTTCAACTACATGTTGGT 164290 ||| || || |||| ||||| | || |||||||| || ||||||| ||| | || Sbjct 41120 AGGAAGCTTTTCGGACGGTATGCCTTTAGGAATCTCTGGTACTTTCAACTTTATGATTGT 41061 Query 164291 GTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATATGCTCGGCGTTGCTGGCGT 164350 ||||| || |||||||||||||| |||||||| || |||||| | ||||| || || || Sbjct 41060 ATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCATATGTTAGGCGTAGCGGGTGT 41001 Query 164351 ATTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGTTACTTCTTCGCTGGTTCG 164410 ||| ||||| || || |||||||| ||||| ||||| |||| || || || | | Sbjct 41000 ATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCAAGTTTGATCAG 40941 Query 164411 TGAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTTTGGTCAAGAAGAAGAAAC 164470 ||||| || |||| ||| || || | |||||||| ||||||||||||| ||||| Sbjct 40940 GGAAACTACAGAAAATGAATCTGCTAATGAAGGTTACAAATTTGGTCAAGAAGGGGAAAC 40881 Query 164471 ATACAACATTGTTGCCGCTCACGGTTACTTTGGTCGTCTGATCTTCCAATACGCTTCATT 164530 || || || || |||||||| ||||| ||||| || ||||||||||||| ||| || Sbjct 40880 TTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTT 40821 Query 164531 CAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGGCATCTGGTT 164590 ||||||||| ||||| || ||||||||||| ||||| |||||||| | || |||||||| Sbjct 40820 CAACAACTCTCGTTCATTACACTTCTTCCTAGCTGCTTGGCCTGTAATAGGTATCTGGTT 40761 Query 164591 CACCGCACTTGGTGTTTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTC 164650 |||||| | ||| || ||| ||||| |||||| | || |||||||| |||||||| || Sbjct 40760 CACCGCTTTAGGTATTAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATC 40701 Query 164651 CATCATCGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAGACGTTCTCAACCGCGCTGG 164710 | | | ||| |||| |||||||| | || |||||||| || || ||||||| ||| Sbjct 40700 CGTAGTTGATAGTCAAGGTCGTGTAATTAATACTTGGGCTGATATTATCAACCGTGCTAA 40641 Query 164711 TCTGGGTATGGAAGTTATGCACGAGCGTAACGCTCACAACTTCCCTCTGGATCTCGCTGC 164770 || ||||||||||||||||| || ||||| ||||||||||||||||| || || ||||| Sbjct 40640 CCTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGC 40581 Query 164771 TGCTGA 164776 || ||| Sbjct 40580 TGTTGA 40575 >seq28 Length=37419 Score = 538 bits (596), Expect = 4e-148 Identities = 725/1006 (72%), Gaps = 10/1006 (1%) Strand=Plus/Minus Query 165206 GATGACTGGCTTAAACGAGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTTTT 165265 ||||||||| | | || ||||| ||||| || |||||||| || || | || ||| Sbjct 31317 GATGACTGGTTGCGGAGGGACCGTTTTGTTTTCGTAGGTTGGTCCGGTCTATTGCTCTTT 31258 Query 165266 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACTTTCGCGACGAGTTGG 165325 || ||| || ||||| | || |||||| | || || || ||||| | || ||| Sbjct 31257 CCTTGTGCCTACTTTGCTTTAGGGGGTTGGTTCACAGGTACAACTTTTGTAACCTCCTGG 31198 Query 165326 TATACTCACGGGTTGGCAAGTTCCTATCTGGAGGG-TGCAAACTTTCTTACTGCGGCAGT 165384 ||||| || || ||||| || |||||| |||| || ||||| ||| | || || ||||| Sbjct 31197 TATACCCATGGATTGGCCAGCTCCTATTTGGAAGGCTGCAA-CTTCTTAACCGCTGCAGT 31139 Query 165385 TTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCTCA 165444 |||||| || || | | | | |||||| | || | || ||||||||||| || || Sbjct 31138 TTCTACCCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAGCGCA 31079 Query 165445 AGGGGATTTCGTCAGGTGGATCCAACTTGGGGGACTCTGGGCTTTTGTGGCGCTCCACGG 165504 ||||||||| | ||| ||| | || || || ||| ||||||| || |||||||| Sbjct 31078 AGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCACGG 31019 Query 165505 GGCTTTCGCTCTAATTGGTTTCATGCTTCGTCAGTTTGAATTAGCACGTCTCATCGGTA- 165563 ||||||| ||||| ||||| ||| | ||||| |||||| | || || ||| || Sbjct 31018 AGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAAATTGCTCG----ATCCGTGC 30963 Query 165564 ---TCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCT 165620 | || || || ||||| || || || |||||||| || |||||||||||| || | Sbjct 30962 AATTGCGACCTTATAATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTAT 30903 Query 165621 TTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCGCAG 165680 | || || || || || |||||||| ||||||| || || || ||| || || |||| Sbjct 30902 TCCTGATTTATCCGCTAGGTCAATCCGGTTGGTTCTTTGCACCTAGTTTTGGTGTAGCAG 30843 Query 165681 CAATCTTCAGGTTCCTTCTCTTCCTACAAGGATTCCATAACTGGACCTTGAATCCCTTTC 165740 | || || | ||| | || || | ||||| || ||||| ||||| |||| || |||| Sbjct 30842 CTATATTTCGATTCATCCTGTTTTTCCAAGGGTTTCATAATTGGACACTGAACCCGTTTC 30783 Query 165741 ATATGATGGGTGTTGCAGGTATCCTGGGTGGTGCATTGCTTTCTGCCATCCATGGTGTTA 165800 |||||||||| ||||| ||| | |||| | || |||| | || || ||||||| || Sbjct 30782 ATATGATGGGAGTTGCTGGTGTATTGGGCGCGGCTCTGCTGTGCGCTATTCATGGTGCTA 30723 Query 165801 CAGTAGAGAATACTCTGTATCAAGATGGTGACGATGCAAATACTTTCAAGGCATTTGACT 165860 | || || |||||| | | | |||| ||||| | ||||||||| ||| || ||| || Sbjct 30722 CTGTCGAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTCCGCGCTTTTAACC 30663 Query 165861 CTACTCAAGAGGAAGAAACCTACTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCT 165920 | ||||||| |||||||| || |||||||| || || ||||| || ||||| || |||| Sbjct 30662 CAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCCAACCGCTTTTGGTCCCAAATCT 30603 Query 165921 TCGGTATTGCGTTTAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTA 165980 | || |||| ||| ||||| | ||||| |||||||||||| | ||||| || || | Sbjct 30602 TTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAA 30543 Query 165981 TGGGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATG 166040 ||| | |||| || | | || | | ||||| ||||| ||||| ||||| |||| Sbjct 30542 CTGGTTTATGGATGAGCGCTCTTGGAGTAGTAGGTCTGGCTCTGAACCTGCGTGCCTATG 30483 Query 166041 ACTTTGTATCCCAAGAGATCAGAGCAGCAGAAGACCCAGAGTTTGAAACCTTCTACACGA 166100 |||| || || || || ||| | ||||| ||||| || || ||||| || ||||| || | Sbjct 30482 ACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTATACCA 30423 Query 166101 AAAACATTCTCTTGAATGAAGGTCTTCGTGCTTGGTTGGCACCAGTCGATCAACCGCATG 166160 |||| ||||| || |||||||| ||||||||||| |||| | ||||| || |||| Sbjct 30422 AAAATATTCTTTTAAATGAAGGCATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATG 30363 Query 166161 AGAACTTTGTCTTCCCTGAAGAAGTTCTGCCTAGGGGTAACGCGCT 166206 | ||| || | ||||| || || ||||| || | || ||||| || Sbjct 30362 AAAACCTTATATTCCCCGAGGAGGTTCTACCCCGTGGAAACGCTCT 30317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555295711421280