Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq98 497 1e-135 seq28 363 2e-95 seq69091 127 2e-24 seq28336 98.7 1e-15 >seq98 Length=41871 Score = 497 bits (550), Expect = 1e-135 Identities = 703/988 (71%), Gaps = 0/988 (0%) Strand=Plus/Minus Query 171820 TTCTGCGAATGGGTAACCTCAACTAACAACAGAATTTATGTTGGTTGGTTCGGTGTACTC 171879 ||||| | ||| ||||| || | ||| | |||| |||| ||||| ||||| | Sbjct 41566 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 41507 Query 171880 ATGATCCCATGTTTGCTCACAGCAGCAGCATGCTTCATCGTTGCATTCATTGCAGCACCT 171939 |||||||| ||| | || ||| | | || || | || |||||||| || ||| Sbjct 41506 ATGATCCCTACTTTATTGACCGCAACTTCTGTATTTATTATCGCTTTCATTGCTGCCCCT 41447 Query 171940 CCTGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAAC 171999 || || ||||| || || || | ||||| ||| | || ||||| | || || ||||| Sbjct 41446 CCAGTAGATATTGATGGTATTCGTGAACCCGTTTCTGGATCTTTACTTTACGGAAACAAT 41387 Query 172000 ATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCAATAGGTCTCCACTTCTACCCTATC 172059 || || |||||||| || |||| | || ||| |||||| | ||||| ||||| || Sbjct 41386 ATTATTTCTGGTGCCATTATTCCTACTTCTGCCGCTATAGGTTTGCACTTTTACCCAATA 41327 Query 172060 TGGGAAGCAGCAACCGTAGATGAATGGTTGTACAATGGTGGTCCTTATCAGTTGGTAATC 172119 |||||||| ||| |||| ||||||||||| ||||| || ||||||||| | | | | Sbjct 41326 TGGGAAGCTGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGTT 41267 Query 172120 TTCCACTTCCTTATCGGTATCTCAGCATACATGGGAAGACAGTGGGAACTATCATACAGA 172179 | |||||| | | ||| | | |||||||| | |||||||||| | | | Sbjct 41266 CTACACTTCTTACTTGGTGTAGCTTGTTACATGGGCCGTGAGTGGGAACTTAGTTTCCGT 41207 Query 172180 TTAGGTATGAGACCATGGATATGTGTAGCATATTCAGCACCTGTATCAGCAGCATTTGCT 172239 || |||||| | || ||||| ||| ||||||||||| ||||| ||||||| ||| Sbjct 41206 TTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCTACCGCT 41147 Query 172240 GTGTTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATC 172299 || ||| | | || ||| | ||||| || || || || |||||||| |||| ||| Sbjct 41146 GTCTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCGGACGGTATGCCTTTAGGAATC 41087 Query 172300 TCAGGTACGTTCAACTTTATGTTCGTGTTCCAAGCAGAGCATAACATTCTAATGCATCCT 172359 || ||||| |||||||||||| | || ||||| || ||||| ||||| || ||||| || Sbjct 41086 TCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCA 41027 Query 172360 TTCCACATGGCAGGAGTAGCAGGAATGTTTGGAGGATCTTTATTCTCAGCAATGCACGGT 172419 || || ||| ||| ||||| || | || || || || ||||| || ||||| ||| Sbjct 41026 TTTCATATGTTAGGCGTAGCGGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGT 40967 Query 172420 TCTTTAGTTACATCTTCTCTAATCAGAGAGACAACTGAAGCAGAATCACAGAACTACGGA 172479 || || || || || | | ||||| || || || ||| ||||| || | || Sbjct 40966 TCCTTGGTAACCTCAAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAGGT 40907 Query 172480 TACAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTTGGT 172539 ||||| || || ||||||| ||||| || || || ||||| || || ||||| ||||| Sbjct 40906 TACAAATTTGGTCAAGAAGGGGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGGC 40847 Query 172540 CGTCTTATCTTCCAGTATGCTTCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCA 172599 || | |||||||| |||||| |||||||||||| | | |||||||||||||| Sbjct 40846 CGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCATTACACTTCTTCCTAGCT 40787 Query 172600 GTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAAC 172659 | || ||||| || || | ||||| ||| || | ||||| | || ||||| |||||| Sbjct 40786 GCTTGGCCTGTAATAGGTATCTGGTTCACCGCTTTAGGTATTAGCACTATGGCTTTCAAC 40727 Query 172660 CTTAACGGTTTCAACTTCAACCAATCAGTTGTAGATGCTAACGGTAAGATTGTTCCTACA 172719 | || |||||||| ||||||||||| || || ||| | | ||| | || ||| Sbjct 40726 TTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAATACT 40667 Query 172720 TGGGGTGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTTATGCATGAAAGAAATGCA 172779 |||| ||| || | ||| | || ||||| ||||||||||||||||||||| | ||||| Sbjct 40666 TGGGCTGATATTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCT 40607 Query 172780 CACAACTTCCCATTAGACCTTGCTTCTG 172807 ||||||||||| ||||||| ||| ||| Sbjct 40606 CACAACTTCCCTCTAGACCTAGCTGCTG 40579 >seq28 Length=37419 Score = 363 bits (402), Expect = 2e-95 Identities = 707/1042 (68%), Gaps = 29/1042 (3%) Strand=Plus/Minus Query 172951 TTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 173010 |||||| || | || |||||||| ||| || ||||| || ||| | || ||||| ||| Sbjct 31329 TTTGATATTATGGATGACTGGTTGCGGAGGGACCGTTTTGTTTTCGTAGGTTGGTCCGGT 31270 Query 173011 CTTTTACTTCTACCTTGTGCTTACCTTTCTATCGGTGGTTGGTTCTTAGGAACTACCTTC 173070 || || || | |||||||| ||| || || | || ||||||||| ||| || || || Sbjct 31269 CTATTGCTCTTTCCTTGTGCCTACTTTGCTTTAGGGGGTTGGTTCACAGGTACAACTTTT 31210 Query 173071 GTTACATCATGGTATACACATGGTATTG--CATCTTCATATCTTGAAGGAGCAAACTTTT 173128 || || || |||||||| ||||| |||| || || | ||| | ||||| ||||| | Sbjct 31209 GTAACCTCCTGGTATACCCATGG-ATTGGCCAGCTCC-TATTTGGAAGGCTGCAACTTCT 31152 Query 173129 TAACAGCAGCAGTCTCCACACCTGGCGACGCAATGGGTCATAGTCTTCTGTTCCTTTGGG 173188 |||| || ||||| || || |||| | | | ||| | | |||| || |||| Sbjct 31151 TAACCGCTGCAGTTTCTACCCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGG 31092 Query 173189 GACCTGAAGCACAAGGTTCATTCGTACGTTGGTTACAACTCGGAGGACTATGGAACTTTG 173248 | |||||||| ||||| || ||||||| ||| | || || || |||| |||| Sbjct 31091 GTCCTGAAGCGCAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTG 31032 Query 173249 TAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCCGTCAGTTTGAGATCGCAG 173308 | || | || |||| || ||||| |||||||| ||| | ||||| ||||| || || Sbjct 31031 TTGCTCTCCACGGAGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAAATTGCTC 30972 Query 173309 GACTTGTAGGCA--TCAGACCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGTCTT 173366 || || ||| | ||||||| || ||| ||||||| |||| | || || || || Sbjct 30971 GATCCGT--GCAATTGCGACCTTATAATGCAATCGCATTTTCTGGTCCAATTGCTGTTTT 30914 Query 173367 CACTAGCATCTTTTTAATCTACCCACTAGGGCAGCACAGTTGGTTCTTCGCACCTTCATT 173426 | | || | || || || ||||| || | |||||||||| |||||| || Sbjct 30913 TGTTTCTGTATTCCTGATTTATCCGCTAGGTCAATCCGGTTGGTTCTTTGCACCTAGTTT 30854 Query 173427 CGGTGTCGCAGCAATCTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTACATT 173486 ||||| ||||| || ||||| | ||| | || | ||||| || || || ||| | Sbjct 30853 TGGTGTAGCAGCTATATTTCGATTCATCCTGTTTTTCCAAGGGTTTCATAATTGGACACT 30794 Query 173487 GAATCCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTACTATGTGCCAT 173546 ||| || ||||| |||||||| ||||| || || | || | || | || || || || Sbjct 30793 GAACCCGTTTCATATGATGGGAGTTGCTGGTGTATTGGGCGCGGCTCTGCTGTGCGCTAT 30734 Query 173547 TCATGGTGCAACAGTGCAGAACACATTGTATGAAGACACATCACAATATACTGAAGGTAA 173606 ||||||||| || || | || || || | ||||||| ||| ||| Sbjct 30733 TCATGGTGCTACTGTCGAAAATACTTTATTTGAAGAC------------GGTGATGGT-- 30688 Query 173607 GATTCAATCCACAACTTTCAGAGCATTTGATCCTACACAGGAAGAAGAAACTTATAGTAT 173666 | | || ||| | || ||| | || || || | |||||||||||| || Sbjct 30687 -------GCAAATACATTCCGCGCTTTTAACCCAACTCAAGCCGAAGAAACTTATTCAAT 30635 Query 173667 GATTACAGCGAACAGATTCTGGTCACAGATATTTGGTATCGCATTTTCAAACAAAAGATT 173726 | | || || ||| | || ||||| || || ||||| | || ||||| || ||| | | Sbjct 30634 GGTCACCGCCAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTG 30575 Query 173727 TTTACACTTCCTCATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCCATAGGTAT 173786 ||||| ||| | ||||| || ||||| || | ||| | |||| | | || | Sbjct 30574 GTTACATTTCTTTATGTTATTTGTACCAGTAACTGGTTTATGGATGAGCGCTCTTGGAGT 30515 Query 173787 CGTAGGTCTTGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGC 173846 |||||||| || || ||||| | || || ||||| || ||||| || || | ||||| Sbjct 30514 AGTAGGTCTGGCTCTGAACCTGCGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGC 30455 Query 173847 AGAAGATCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATGAG 173906 |||||||| || || ||||||||||| || || ||||| ||| | |||||||| || | Sbjct 30454 GGAAGATCCTGAATTTGAGACTTTCTATACCAAAAATATTCTTTTAAATGAAGGCATTCG 30395 Query 173907 AGCATGGATGTCATCTGTAGATCAACCACATGAGAACTTCGTATTTCCAGAAGAAGTGTT 173966 || |||||| | || |||||| || ||||| ||| | |||| || || || || | Sbjct 30394 TGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCCGAGGAGGTTCT 30335 Query 173967 ACCAAGAGGTAACGCACTTTAA 173988 ||| | || ||||| |||||| Sbjct 30334 ACCCCGTGGAAACGCTCTTTAA 30313 >seq69091 Length=3183 Score = 127 bits (140), Expect = 2e-24 Identities = 127/165 (77%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 157939 GAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGA 157998 |||||||| ||||||||| ||||| || ||||| ||||||||||||||||| ||| Sbjct 1460 GAGAATCCAGCTTGGTACACCCAATACACGCCATATCAGGCTGAGATATCTCAGGGGAGA 1519 Query 157999 TTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCA 158058 ||||| |||| | || |||||||| | || || || ||||| ||||| || || || Sbjct 1520 TTGGAGTCTTTGCTTAACTACCAAACTGTGATAACTGATCTCACCGGACTGCCCATGTCA 1579 Query 158059 AACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103 || || || ||| | ||||||| ||||| || || ||||||||| Sbjct 1580 AATGCTTCCCTACTTGATGAAGGTACTGCTGCTGCTGAAGCAATG 1624 Score = 102 bits (112), Expect = 1e-16 Identities = 150/208 (72%), Gaps = 6/208 (3%) Strand=Plus/Plus Query 158443 CAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 158502 || ||||||||| |||| ||||| || || ||||||||||| || ||||| || ||| || Sbjct 1961 CAGAGGTTTGGTGTTCCAATGGGGTATGGTGGTCCTCATGCAGCTTTCTTGGCTACATCA 2020 Query 158503 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAG--GTCAGTCAGTAGATAGCGAAG 158560 | |||| ||||| | ||| ||||| |||||| | | |||||| || ||| || Sbjct 2021 CAAGAGTACAAGAGGATGATGCCTGGAAGAATTATTGGTGTCAGT--GTTGATTCTACAG 2078 Query 158561 GTAATAAAGC-ATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAA 158619 | || || ||| | | || | || || ||||| |||||||| | || || ||| Sbjct 2079 GGAAGCCTGCTCTAC-GTATGGCCATGCAAACAAGAGAACAGCATATTCGCAGGGATAAA 2137 Query 158620 GCAACCAGTAACATCTGCACAGCACAAG 158647 || || || ||||||||||| || |||| Sbjct 2138 GCTACTAGCAACATCTGCACTGCCCAAG 2165 >seq28336 Length=2969 Score = 98.7 bits (108), Expect = 1e-15 Identities = 89/112 (79%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 159693 TGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTGG 159752 ||| || ||||| || ||||| || | ||||||||||| || ||||| ||||||||||| Sbjct 2248 TGGAGCTGATGTTTGCCATCTTAATCTCCATAAGACATTTTGCATTCCCCATGGAGGTGG 2189 Query 159753 AGGTCCTGGCGTAGGTCCTATTGGTGTAGCAAAACATCTCACACCATTTGTA 159804 |||||||| | |||||||||||||| |||||| | |||||||| || Sbjct 2188 TGGTCCTGGTATGGGTCCTATTGGTGTGAAGAAACATTTGGCACCATTTCTA 2137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 586331062032320