Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_015286.1 Length=175230 Score E Sequences producing significant alignments: (Bits) Value seq98 580 1e-160 seq28 558 4e-154 >seq98 Length=41871 Score = 580 bits (642), Expect = 1e-160 Identities = 715/984 (73%), Gaps = 2/984 (0%) Strand=Plus/Minus Query 167097 TGGGTTACCAGCACTAACAACCGTCTGTATGTCGGTTGGTTCGGCGTTCTGATGATCCCT 167156 ||| | |||||||| | |||||||| || | || ||||| || ||| ||||||||||| Sbjct 41557 TGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCT 41498 Query 167157 ACGTTGCTTGCAGCAACCATCTGT-TTCATCATCGCCTTCGTCGGTGCTCCTCCTGTGGA 167215 || || | | ||||| ||||| || || ||||| ||| | | ||| ||||| || || Sbjct 41497 ACTTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCAGTAGA 41439 Query 167216 CATCGATGGTATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACAACATCATCTC 167275 || |||||||| || ||||| ||| |||| || | | || || ||||| || || || Sbjct 41438 TATTGATGGTATTCGTGAACCCGTTTCTGGATCTTTACTTTACGGAAACAATATTATTTC 41379 Query 167276 TGGTGCAGTTGTTCCTTCTTCTAATGCTATTGGTCTTCACTTCTATCCCATCTGGGAAGC 167335 |||||| || ||||| ||||| ||||| ||| | ||||| || || || |||||||| Sbjct 41378 TGGTGCCATTATTCCTACTTCTGCCGCTATAGGTTTGCACTTTTACCCAATATGGGAAGC 41319 Query 167336 AGCAACCCTCGACGAGTGGTTGTACAATGGTGGTCCTTTCCAACTCGTAGTTTTCCACTT 167395 ||| || | || || ||||| ||||| || ||||||| |||| | ||| | ||||| Sbjct 41318 TGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTT 41259 Query 167396 CCTGATTGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACCGTCTCGGTAT 167455 | | |||| | | || ||||| |||||||||||||| || |||| | ||||| Sbjct 41258 CTTACTTGGTGTAGCTTGTTACATGGGCCGTGAGTGGGAACTTAGTTTCCGTTTGGGTAT 41199 Query 167456 GCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCT 167515 ||| || ||||| ||||||||| || ||||| || || ||||| | ||||| ||| | Sbjct 41198 GCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCTACCGCTGTCTTCTT 41139 Query 167516 CGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCGATGCCTCTTGGTATCTCTGGTAC 167575 | || || | |||||||| || || |||| |||||| | || ||||||||||| Sbjct 41138 GATTTACCCAATTGGTCAAGGAAGCTTTTCGGACGGTATGCCTTTAGGAATCTCTGGTAC 41079 Query 167576 ATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATAT 167635 ||||||| ||| |||| ||||| || |||||||||||||| |||||||| || ||||| Sbjct 41078 TTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCATAT 41019 Query 167636 GCTCGGCGTTGCTGGCGTATTCGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGT 167695 | | ||||| || || ||||||||||| || || |||||||| ||||| ||||| |||| Sbjct 41018 GTTAGGCGTAGCGGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGT 40959 Query 167696 TACCTCTTCGCTGGTTCGTGAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTT 167755 ||||| || | | ||||| || |||| ||| || || | |||||||| || Sbjct 40958 AACCTCAAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAGGTTACAAATT 40899 Query 167756 CGGTCAGGAAGAAGAGACGTATAACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTGAT 167815 ||||| |||| || || ||||| ||||| || ||||||||||| || || || |||| Sbjct 40898 TGGTCAAGAAGGGGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGAT 40839 Query 167816 CTTCCAATACGCATCCTTCAACAACTCCCGCTCGCTGCACTTCTTCTTGGCAGCATGGCC 167875 ||||||||| || ||||||||||| || || | ||||||||| | || || ||||| Sbjct 40838 CTTCCAATATGCTAGTTTCAACAACTCTCGTTCATTACACTTCTTCCTAGCTGCTTGGCC 40779 Query 167876 TGTTGTTGGTATCTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCAACCTGAACGG 167935 ||| | |||||||||| |||||| | || || Sbjct 40778 TGTAATAGGTATCTGGTTCACCGCTTTAGGTATTAGCACTATGGCTTTCAACTTAAATGG 40719 Query 167936 TTTCAACTTCAACCAGTCTATCCTTGATAGTTCTGGTAAGGTTCTGCCTACTTGGGCAGA 167995 |||||| |||||||| || | |||||||| ||| || | ||||||||| || Sbjct 40718 TTTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAATACTTGGGCTGA 40659 Query 167996 CGTGCTCAACCGTGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTT 168055 | ||||||||||| || ||||||||||||||||| || ||||||||||||||||| Sbjct 40658 TATTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTT 40599 Query 168056 CCCTCTCGACCTTGCTGCTGCTGA 168079 |||||| ||||| ||||||| ||| Sbjct 40598 CCCTCTAGACCTAGCTGCTGTTGA 40575 >seq28 Length=37419 Score = 558 bits (618), Expect = 4e-154 Identities = 727/1005 (72%), Gaps = 8/1005 (1%) Strand=Plus/Minus Query 168495 GATGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTTTT 168554 ||||||||| | |||| ||||| ||||| || |||||||| || || | || ||| Sbjct 31317 GATGACTGGTTGCGGAGGGACCGTTTTGTTTTCGTAGGTTGGTCCGGTCTATTGCTCTTT 31258 Query 168555 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTGCTTTCGTCACGAGTTGG 168614 || ||| || ||||| | || |||||| | || || || |||| || || ||| Sbjct 31257 CCTTGTGCCTACTTTGCTTTAGGGGGTTGGTTCACAGGTACAACTTTTGTAACCTCCTGG 31198 Query 168615 TATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGCGCAAACTTTCTTACTGCGGCAGTT 168674 ||||| || || ||||| || |||||| |||| ||| ||||| | || || |||||| Sbjct 31197 TATACCCATGGATTGGCCAGCTCCTATTTGGAAGGCTGCAACTTCTTAACCGCTGCAGTT 31138 Query 168675 AGTACTCCAGCAGATTCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCACAA 168734 ||| || || || | | | |||||| | || | || ||||||||||| || ||| Sbjct 31137 TCTACCCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAGCGCAA 31078 Query 168735 GGGGATTTCGTCAGATGGTGTCAACTTGGAGGACTCTGGGCTTTTGTGGCGCTCCACGGG 168794 |||||||| | ||||||||| | || || || ||| ||||||| || |||||||| Sbjct 31077 GGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCACGGA 31018 Query 168795 GCTTTCGCTCTAATCGGTTTCATGCTTCGTCAGTTTGAACTGGCACGTCTCATCGGTA-- 168852 ||||||| ||||| ||||| ||| | ||||| |||||| | || || ||| || Sbjct 31017 GCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAAATTGCTCG----ATCCGTGCA 30962 Query 168853 --TCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTT 168910 | || || || ||||| || || || |||||||| || |||||||||||| || || Sbjct 30961 ATTGCGACCTTATAATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATT 30902 Query 168911 TCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGC 168970 || || || || || |||||||| ||||||| || || || ||| || || |||| Sbjct 30901 CCTGATTTATCCGCTAGGTCAATCCGGTTGGTTCTTTGCACCTAGTTTTGGTGTAGCAGC 30842 Query 168971 AATCTTCCGATTCCTTCTCTTCCTACAAGGATTCCATAACTGGACACTGAATCCATTTCA 169030 || || |||||| | || || | ||||| || ||||| ||||||||||| || ||||| Sbjct 30841 TATATTTCGATTCATCCTGTTTTTCCAAGGGTTTCATAATTGGACACTGAACCCGTTTCA 30782 Query 169031 TATGATGGGTGTAGCAGGTATTTTGGGAGGAGCCTTGCTTTCTGCCATTCATGGTGTTAC 169090 ||||||||| || || ||| | ||||| | || |||| | || |||||||||| ||| Sbjct 30781 TATGATGGGAGTTGCTGGTGTATTGGGCGCGGCTCTGCTGTGCGCTATTCATGGTGCTAC 30722 Query 169091 AGTAGAGAATACTCTGTATCAAGATGGTGAACAAGCAAATACTTTCAAAGCATTTGACAG 169150 || || |||||| | | | |||| ||||| |||||||| ||| || ||| || Sbjct 30721 TGTCGAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTCCGCGCTTTTAACCC 30662 Query 169151 CACTCAGGAAGAGGAGACCTATTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTT 169210 ||||| | || || || ||||||||||| || || ||||| || ||||| || ||||| Sbjct 30661 AACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCCAACCGCTTTTGGTCCCAAATCTT 30602 Query 169211 TGGTATTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTAT 169270 ||| |||| || ||||| | ||||| |||||||||||| | ||||| || || | Sbjct 30601 TGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAAC 30542 Query 169271 GGGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGA 169330 ||| | |||| || | | || | | ||||| ||||| ||||| ||||| ||||| Sbjct 30541 TGGTTTATGGATGAGCGCTCTTGGAGTAGTAGGTCTGGCTCTGAACCTGCGTGCCTATGA 30482 Query 169331 CTTTGTTTCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTTGAGACGTTCTACACCAA 169390 ||| ||||| || || ||| | ||||| |||||||| || |||||||| ||||| ||||| Sbjct 30481 CTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTATACCAA 30422 Query 169391 GAACATCCTCTTGAACGAAGGTCTTCGTGCATGGTTAGCACCTATTGATCAACCTCATGA 169450 || || || || || ||||| ||||||| ||| | || || ||||| |||||||| Sbjct 30421 AAATATTCTTTTAAATGAAGGCATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGA 30362 Query 169451 GAACTTTGTGTTCCCTGAGGAAGTACTTCCCCGAGGTAATGCCCT 169495 ||| || | ||||| ||||| || || ||||| || || || || Sbjct 30361 AAACCTTATATTCCCCGAGGAGGTTCTACCCCGTGGAAACGCTCT 30317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 558968137508800