Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_015288.1 Length=191195 Score E Sequences producing significant alignments: (Bits) Value seq98 648 0.0 seq28 567 9e-157 >seq98 Length=41871 Score = 648 bits (718), Expect = 0.0 Identities = 732/975 (75%), Gaps = 8/975 (1%) Strand=Plus/Minus Query 181815 ACCAACAATCGTCTCTATGTCGGTTGGTTTGGTGTGCTGATGATCCCAACTCTGTTGGCG 181874 ||| | || ||||| || | || ||||||||||| |||||||||| ||| | ||| | Sbjct 41545 ACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACC 41486 Query 181875 GCAACCATCTGT-TTCATCGTTGCTTTCGTAGCAGCACCTCCTGTCGATATCGACGGTAT 181933 ||||| ||||| || || | |||||| | || || ||||| || ||||| || ||||| Sbjct 41485 GCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCAGTAGATATTGATGGTAT 41427 Query 181934 CCGCGAACCCGTAGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCTGTTGT 181993 || |||||||| |||| || | | || || ||||| || || |||||||| || | Sbjct 41426 TCGTGAACCCGTTTCTGGATCTTTACTTTACGGAAACAATATTATTTCTGGTGCCATTAT 41367 Query 181994 CCCATCCTCCAACGCAATTGGTCTTCACTTCTACCCAATCTGGGAAGCTGCCTCACTTGA 182053 || | || ||| || ||| | ||||| |||||||| ||||||||||| || |||| Sbjct 41366 TCCTACTTCTGCCGCTATAGGTTTGCACTTTTACCCAATATGGGAAGCTGCATCCGTTGA 41307 Query 182054 TGAGTGGCTGTATAACGGTGGTCCTTTCCAACTGGTTGTTTTCCACTTCCTGATCGGCAT 182113 ||| ||| | || ||||| ||||||| |||| ||||| | |||||| | | || | Sbjct 41306 TGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGG--T 41249 Query 182114 CTACGCCT---ACATGGGACGTGAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCCTG 182170 || || | ||||||| ||||||||||||||| || ||| || |||||||| || || Sbjct 41248 GTA-GCTTGTTACATGGGCCGTGAGTGGGAACTTAGTTTCCGTTTGGGTATGCGCCCTTG 41190 Query 182171 GATCTGTGTAGCATACTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCTTAGTCTATCC 182230 ||| ||| ||||| || ||||| || || ||||| | ||||| ||||| | || || Sbjct 41189 GATTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCTACCGCTGTCTTCTTGATTTACCC 41130 Query 182231 TTTCGGTCAAGGTTCGTTCTCCGATGCAATGCCCCTCGGAATCTCAGGAACATTCAACTA 182290 | |||||||| || || || | ||||| | |||||||| || || ||||||| Sbjct 41129 AATTGGTCAAGGAAGCTTTTCGGACGGTATGCCTTTAGGAATCTCTGGTACTTTCAACTT 41070 Query 182291 TATGTTGGTTTTCCAAGCTGAGCACAACATTCTTATGCATCCCTTCCACATGTTGGGTGT 182350 |||| | || ||||| |||||||||||||| |||||||| || || || ||||| || || Sbjct 41069 TATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCATATGTTAGGCGT 41010 Query 182351 AGCAGGTGTATTCGGTGGTTCACTGTTTAGTGCAATGCACGGTTCTTTGGTTACATCTTC 182410 ||| ||||||||||| || || || || ||||| ||||| ||||| ||||| || || Sbjct 41009 AGCGGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCAAG 40950 Query 182411 ACTCGTCCGTGAGACGACTGAGCAAGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGA 182470 | || | || || || || | || || || | |||||||| || |||||||| Sbjct 40949 TTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAGGTTACAAATTTGGTCAAGA 40890 Query 182471 AGAAGAGACCTATAACATCGTTGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATA 182530 || || || ||||| ||||| || || ||||| || || || || |||||||||||||| Sbjct 40889 AGGGGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATA 40830 Query 182531 CGCATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGG 182590 || ||||||||||| ||||| || ||||||||||| ||||| |||||||| | || Sbjct 40829 TGCTAGTTTCAACAACTCTCGTTCATTACACTTCTTCCTAGCTGCTTGGCCTGTAATAGG 40770 Query 182591 AATCTGGTTCACCGCACTTGGTGTCTCCACGATGGCATTCAACCTCAACGGTTTCAACTT 182650 |||||||||||||| | ||| | ||| ||||| |||||| | || |||||||| || Sbjct 40769 TATCTGGTTCACCGCTTTAGGTATTAGCACTATGGCTTTCAACTTAAATGGTTTCAATTT 40710 Query 182651 CAACCAGTCCATCCTTGATGGTCAGGGTCGTGTCCTTAACACTTGGGCAGATGTATTGAA 182710 |||||| ||| | ||||| |||| |||||||| |||| |||||||| ||| | | || Sbjct 40709 CAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAATACTTGGGCTGATATTATCAA 40650 Query 182711 CCGTGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTAGA 182770 ||||||| ||||||||||||||||||||||| ||||| || ||||||||||| ||||| Sbjct 40649 CCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGA 40590 Query 182771 TCTTGCTGCTGCTGA 182785 || ||||||| ||| Sbjct 40589 CCTAGCTGCTGTTGA 40575 >seq28 Length=37419 Score = 567 bits (628), Expect = 9e-157 Identities = 732/1008 (73%), Gaps = 2/1008 (0%) Strand=Plus/Minus Query 183193 GATGACTGGGTTAAACGCGATCGCTTTGTCTTTGTGGGCTGGTCTGGACTCCTACTTCTT 183252 ||||||||| | | || || ||||| || || || ||||| || || | || || Sbjct 31317 GATGACTGGTTGCGGAGGGACCGTTTTGTTTTCGTAGGTTGGTCCGGTCTATTGCTCTTT 31258 Query 183253 CCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTTACGAGTTGG 183312 || ||| || |||| | || |||||| | || || ||| ||||||| || ||| Sbjct 31257 CCTTGTGCCTACTTTGCTTTAGGGGGTTGGTTCACAGGTACAACTTTTGTAACCTCCTGG 31198 Query 183313 TATACCCATGGACTTGCTTCTTCCTATCTTGAAGG-TGCTAACTTTCTTACGGCAGCTGT 183371 |||||||||||| | || |||||| | ||||| ||| ||||| | || || || || Sbjct 31197 TATACCCATGGATTGGCCAGCTCCTATTTGGAAGGCTGC-AACTTCTTAACCGCTGCAGT 31139 Query 183372 CTCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTGTTACTTTGGGGTCCTGAGTCTCA 183431 || || |||||| | | | | |||||| | ||||||| ||||||||||| | || Sbjct 31138 TTCTACCCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAGCGCA 31079 Query 183432 AGGGGACTTTCAACGCTGGTGCCAACTTGGGGGACTCTGGAATTTTGTGGCACTCCACGG 183491 |||||| ||| || ||||| ||| | || || || |||| |||||| || |||||||| Sbjct 31078 AGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCACGG 31019 Query 183492 TGCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAACTTGCTCGCTTGATTGGTAT 183551 || || | || || ||||| ||| | || || |||||| ||||||| | | | Sbjct 31018 AGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAAATTGCTCGATCCGTGCAATT 30959 Query 183552 CCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGTGTATTCCT 183611 || ||||| ||||| || || || |||||||| |||||||||||||| ||||||||| Sbjct 30958 GCGACCTTATAATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTCCT 30899 Query 183612 TATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCGGGGTAGCAGCAAT 183671 || ||||| || ||||| || |||||||||||||||||||| || |||||||| || Sbjct 30898 GATTTATCCGCTAGGTCAATCCGGTTGGTTCTTTGCACCTAGTTTTGGTGTAGCAGCTAT 30839 Query 183672 CTTTAGATTCCTATTGTTCCTTCAGGGTTTCCACAACTGGACGTTAAACCCCTTCCATAT 183731 ||| ||||| | |||| | || || || || || ||||| | ||||| || ||||| Sbjct 30838 ATTTCGATTCATCCTGTTTTTCCAAGGGTTTCATAATTGGACACTGAACCCGTTTCATAT 30779 Query 183732 GATGGGAGTTGCTGGTATACTAGGAGGAGCACTACTCAGTGCTATCCATGGTGTCACAGT 183791 |||||||||||||||| || | || | || || || | ||||| ||||||| || || Sbjct 30778 GATGGGAGTTGCTGGTGTATTGGGCGCGGCTCTGCTGTGCGCTATTCATGGTGCTACTGT 30719 Query 183792 AGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTCAAGGCATTTGATTCCAC 183851 || ||||| || | |||||| || || ||||| |||||| || ||| | | || Sbjct 30718 CGAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTCCGCGCTTTTAACCCAAC 30659 Query 183852 TCAAGAAGAAGAGACGTATTCTATGGTTACAGCGAATCGTTTCTGGTCACAAATCTTCGG 183911 ||||| ||||| || ||||| ||||| || || || || || ||||| |||||||| || Sbjct 30658 TCAAGCCGAAGAAACTTATTCAATGGTCACCGCCAACCGCTTTTGGTCCCAAATCTTTGG 30599 Query 183912 GGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCATGGG 183971 |||||| ||| |||||| |||||||| || ||||||||||| ||||| || || | || Sbjct 30598 GGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACTGG 30539 Query 183972 TCTTTGGGTCTCTTCTATTGGCATCATTGGGCTTGCTCTTAATCTTCGTGCTTATGATTT 184031 | | ||| | || |||| | | || || ||||| || || ||||| ||||| || Sbjct 30538 TTTATGGATGAGCGCTCTTGGAGTAGTAGGTCTGGCTCTGAACCTGCGTGCCTATGACTT 30479 Query 184032 TGTAAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACGTTCTACACAAAGAA 184091 || ||| || ||| | ||||| |||||||| ||||||||||| ||||| || || || Sbjct 30478 CGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTATACCAAAAA 30419 Query 184092 CATACTTCTTAATGAAGGACTACGTGCATGGTTAGCACCTTCTGATCAACCACATGAGAA 184151 || ||| | |||||||| | ||||| ||| | || || ||||| || ||||| || Sbjct 30418 TATTCTTTTAAATGAAGGCATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAA 30359 Query 184152 TTTTATATTTCCAGAGGAGGTATTACCTAGAGGCAATGCTCTTTGATG 184199 ||||||| || |||||||| |||| | || || ||||||| ||| Sbjct 30358 CCTTATATTCCCCGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAATG 30311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 609906697445600