Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_015289.1 Length=176184 Score E Sequences producing significant alignments: (Bits) Value seq98 634 7e-177 seq28 580 1e-160 >seq98 Length=41871 Score = 634 bits (702), Expect = 7e-177 Identities = 727/972 (75%), Gaps = 8/972 (1%) Strand=Plus/Minus Query 164784 CACCAATAACCGTCTTTATGTCGGTTGGTTCGGTGTTCTTATGATCCCCTGTTTGCTCGC 164843 |||| | ||||||||||| | || ||||| |||||| | |||||||| ||| | | Sbjct 41546 CACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGAC 41487 Query 164844 CGCTACAATTTGT-TTTATTACTGCATTCATCGCTGCTCCCCCTGTGGACATTGATGGTA 164902 ||| || | ||| ||||||| || ||||| ||||| || || || || |||||||||| Sbjct 41486 CGCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCAGTAGATATTGATGGTA 41428 Query 164903 TTCGTGAACCTGTCGCAGGTTCTCTAATGTACGGTAACAACATCATCTCTGGTGCTGTCG 164962 |||||||||| || | || ||| || | ||||| ||||| || || |||||||| | Sbjct 41427 TTCGTGAACCCGTTTCTGGATCTTTACTTTACGGAAACAATATTATTTCTGGTGCCATTA 41368 Query 164963 TTCCGTCTTCTAACGCAATCGGACTTCACTTCTATCCTATTTGGGAAGCTGCAACCATGG 165022 |||| ||||| ||| || || | ||||| || || || |||||||||||| || | | Sbjct 41367 TTCCTACTTCTGCCGCTATAGGTTTGCACTTTTACCCAATATGGGAAGCTGCATCCGTTG 41308 Query 165023 ATGAATGGTTGTACAACGGTGGTCCTTACCAGTTGGTTGTCTTCCACTTCCTCATCGGTG 165082 |||||||||| |||||||| |||||||| | | |||| | |||||| | | |||| Sbjct 41307 ATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTG 41248 Query 165083 TAGCTTGCTACATGGGTCGTGAGTGGGAACTGTCTTACCGCCTCGGTATGCGTCCTTGGA 165142 ||||||| |||||||| |||||||||||||| || ||| | |||||||| ||||||| Sbjct 41247 TAGCTTGTTACATGGGCCGTGAGTGGGAACTTAGTTTCCGTTTGGGTATGCGCCCTTGGA 41188 Query 165143 TTTGCGTAGCATATAGCGCACCTGTCGCTGCTGCTGCCGCAGTTTTCCTGGTCTATCCTT 165202 || || |||||| || ||||| || || ||| |||| || ||| || | || || Sbjct 41187 TTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCTACCGCTGTCTTCTTGATTTACCCAA 41128 Query 165203 TCGGTCAAGGGAGTTTCTCTGATGGTATGCCTCTTGGTATCTCTGGTACTTTTAACTATA 165262 | |||||||| || || || || ||||||||| | || |||||||||||||| |||| || Sbjct 41127 TTGGTCAAGGAAGCTTTTCGGACGGTATGCCTTTAGGAATCTCTGGTACTTTCAACTTTA 41068 Query 165263 TGTTCGTCTTCCAAGCAGAACATAACATTCTTATGCATCCGTTCCACATGCTCGGCGTTG 165322 || | || ||||| || || || ||||| |||||||| || || || ||| | ||||| | Sbjct 41067 TGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCATATGTTAGGCGTAG 41008 Query 165323 CTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTTGTTACTTCCTCA- 165381 | || |||||||| || || || ||| |||||||||||| |||| || ||||| Sbjct 41007 CGGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG-TTCCTTGGTA--ACCTCAA 40951 Query 165382 --CTCGTCCGCGAGACAACTGAAACAGAGAGTCAGAACTACGGTTATAAGTTTGGACAAG 165439 | || | || || || |||| || | || | ||||| || ||||| |||| Sbjct 40950 GTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAGGTTACAAATTTGGTCAAG 40891 Query 165440 AAGAAGAGACCTATAACATCGTCGCTGCCCACGGGTACTTCGGTCGTCTCATTTTCCAAT 165499 ||| || || ||||| ||||| || || || || || || || || | || ||||||| Sbjct 40890 AAGGGGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAAT 40831 Query 165500 ACGCATCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTG 165559 | || |||||||| || ||||| | ||||||||||| || || ||||||||| | | Sbjct 40830 ATGCTAGTTTCAACAACTCTCGTTCATTACACTTCTTCCTAGCTGCTTGGCCTGTAATAG 40771 Query 165560 GTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTGAACGGTTTCAACT 165619 ||||||||||||| ||| | ||| ||||||| ||||| |||||| | || |||||||| | Sbjct 40770 GTATCTGGTTCACCGCTTTAGGTATTAGCACTATGGCTTTCAACTTAAATGGTTTCAATT 40711 Query 165620 TCAACCAGTCTATTGTTGATAGTCAGAACAAAATCATCCCTACTTGGGCTGACGTTCTGA 165679 ||||||| || | ||||||||||| | || |||||||||||| || | | Sbjct 40710 TCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAATACTTGGGCTGATATTATCA 40651 Query 165680 ACCGTGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCTCACAACTTCCCCCTCG 165739 |||||||| || |||||||||||||||||||| ||||| |||||||||||||| || | Sbjct 40650 ACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAG 40591 Query 165740 ACCTCGCTGCTG 165751 |||| ||||||| Sbjct 40590 ACCTAGCTGCTG 40579 >seq28 Length=37419 Score = 580 bits (642), Expect = 1e-160 Identities = 725/989 (73%), Gaps = 4/989 (0%) Strand=Plus/Minus Query 166191 GATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTCTTCCCACTGCTTATCTTGCT 166250 || ||||| ||||| || |||||||| || || | || |||| ||| || ||||| Sbjct 31299 GACCGTTTTGTTTTCGTAGGTTGGTCCGGTCTATTGCTCTTTCCTTGTGCCTACTTTGCT 31240 Query 166251 ATTGGCGGTTGGCTCACTGGGACTACTTTCGTCACGAGTTGGTATACTCATGGACTCGCA 166310 | || |||||| |||| || || ||||| || || |||||||| |||||| | || Sbjct 31239 TTAGGGGGTTGGTTCACAGGTACAACTTTTGTAACCTCCTGGTATACCCATGGATTGGCC 31180 Query 166311 AGCAGTTATCTGGAGGG-TGCAAACTTTCTTACTGCGGCAGTTTCTACTCCAGCAGATGC 166369 ||| ||| |||| || ||||| ||| | || || ||||||||||| || || || Sbjct 31179 AGCTCCTATTTGGAAGGCTGCAA-CTTCTTAACCGCTGCAGTTTCTACCCCTGCTAATAG 31121 Query 166370 TATGGGTCATTCTCTACTTCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTG 166429 | | | |||||| | | | || ||||||||||| || ||||||||||| | || Sbjct 31120 TTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAGCGCAAGGGGATTTTACTCGTTG 31061 Query 166430 GTGCCAACTTGGAGGGCTTTGGGCCTTTGTTGCTCTCCACGGTGCTTTTGCCCTAATTGG 166489 ||| ||| | || || || ||| | ||||||||||||||||| ||||| | ||||| || Sbjct 31060 GTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCACGGAGCTTTCGGACTAATAGG 31001 Query 166490 TTTCATGCTTCGGCAGTTTGAAATCGCTCGTCTAGTAGGTATT-CGTCCGTACAATGCAA 166548 ||| ||| | || || |||||||| ||||| || | ||| || || || ||||||| Sbjct 31000 TTTTATGTTACGTCAATTTGAAATTGCTCGATCCGT-GCAATTGCGACCTTATAATGCAA 30942 Query 166549 TCGCTTTTTCTGGTCCTATTGCTGTCTTCGTTAGTGTCTTTCTCATCTACCCTCTGGGTC 166608 |||| ||||||||||| |||||||| || ||| ||| || || || || || || |||| Sbjct 30941 TCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCGCTAGGTC 30882 Query 166609 AATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAATCTTCCGATTCCTCCTTT 166668 |||| ||||||| || || || ||| || || |||| || || |||||| |||| | Sbjct 30881 AATCCGGTTGGTTCTTTGCACCTAGTTTTGGTGTAGCAGCTATATTTCGATTCATCCTGT 30822 Query 166669 TCCTTCAAGGATTCCACAACTGGACACTGAACCCATTTCATATGATGGGTGTAGCAGGTA 166728 | | ||||| || || || |||||||||||||| |||||||||||||| || || ||| Sbjct 30821 TTTTCCAAGGGTTTCATAATTGGACACTGAACCCGTTTCATATGATGGGAGTTGCTGGTG 30762 Query 166729 TTCTCGGTGGTGCATTGCTTTCTGCCATCCATGGTGTTACAGTAGAGAACACTCTGTATC 166788 | | || | || |||| | || || ||||||| ||| || || || ||| | | | Sbjct 30761 TATTGGGCGCGGCTCTGCTGTGCGCTATTCATGGTGCTACTGTCGAAAATACTTTATTTG 30702 Query 166789 AAGATGGTGAACAGGCAAATACTTTCAAGGCATTCGACTCTACTCAAGAGGAAGAAACCT 166848 |||| ||||| |||||||| ||| || || || | ||||||| |||||||| | Sbjct 30701 AAGACGGTGATGGTGCAAATACATTCCGCGCTTTTAACCCAACTCAAGCCGAAGAAACTT 30642 Query 166849 ATTCAATGGTTACAGCAAACCGCTATTGGTCTCAGATCTTCGGTATTGCGTTTAGTAATA 166908 |||||||||| || || ||||||| |||||| || ||||| || |||| ||| |||| Sbjct 30641 ATTCAATGGTCACCGCCAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATA 30582 Query 166909 AGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTGTGGACAAGTTCCA 166968 | | ||||| |||||||||||| | ||||| || || | ||| | |||| || | Sbjct 30581 AACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACTGGTTTATGGATGAGCGCTC 30522 Query 166969 TCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAACTAA 167028 | || | | ||||| ||||| ||||| ||||| |||||||| ||||| || ||| | Sbjct 30521 TTGGAGTAGTAGGTCTGGCTCTGAACCTGCGTGCCTATGACTTCGTTTCTCAGGAAATCC 30462 Query 167029 GGGCAGCAGAGGATCCTGAGTTTGAAACCTTCTATACCAAGAACATTCTCTTGAATGAGG 167088 | ||||| || |||||||| ||||| || ||||||||||| || ||||| || ||||| | Sbjct 30461 GTGCAGCGGAAGATCCTGAATTTGAGACTTTCTATACCAAAAATATTCTTTTAAATGAAG 30402 Query 167089 GTATGCGTTCTTGGATGGCAACTATCGATCAACCTCATGAGAGTTTCGTATTCCCTGAAG 167148 | || ||| |||||||||| || ||||| |||||||| | | ||||||| || | Sbjct 30401 GCATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCCGAGG 30342 Query 167149 AGGTTCTTCCTAGAGGTAACGCTCTCTAA 167177 ||||||| || | || |||||||| ||| Sbjct 30341 AGGTTCTACCCCGTGGAAACGCTCTTTAA 30313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562012007610880