Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq87537 105 4e-18 seq18136 102 5e-17 seq1027 89.7 3e-13 >seq87537 Length=233 Score = 105 bits (116), Expect = 4e-18 Identities = 140/192 (73%), Gaps = 8/192 (4%) Strand=Plus/Minus Query 34794 TTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATT 34853 ||||| ||||||||||||| ||| | || |||| |||||||| || || ||||| || Sbjct 232 TTCTGGATGTTATAGTCCGCAAGAGTACGCCCATCTTCCAGCTGCTTCCCTGCAAAGATC 173 Query 34854 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT 34913 || | ||||||||| |||| | ||| ||||| || ||||| ||| || || | Sbjct 172 AGCCTTTGCTGGTCCGGCGGGATCCCTTCCTTATCCTGGATCTTGGCTTTAAC--AT--T 117 Query 34914 ATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 ||| || || | ||| || || | || ||||| |||||||| ||||| ||||| Sbjct 116 ATCAATGGTATCGGAGCTCTCCACCTCTAGAGTGATGGTCTTTCCCGTTAGAGTTTTCAC 57 Query 34970 AAAGATCTGCAT 34981 |||||||||||| Sbjct 56 AAAGATCTGCAT 45 >seq18136 Length=774 Score = 102 bits (112), Expect = 5e-17 Identities = 109/143 (76%), Gaps = 2/143 (1%) Strand=Plus/Minus Query 34748 ATCAT--TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTA 34805 ||||| |||||||||| | ||||||||||| |||| ||| |||||||| ||||| Sbjct 666 ATCATAGTTCCTCCCCTAAGCCTCAAAACCAGATGAAGTGTTGACTCTTTCTGGATGTTG 607 Query 34806 TAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGG 34865 ||||| | || |||| |||| |||||||| || ||||| || || |||| |||||| Sbjct 606 TAGTCAGCGAGAGTTCGGCCATCCTCCAGCTGCTTGCCGGCGAAAATCAGTCTCTGCTGG 547 Query 34866 TCTTGCGGCACCCCCTCCTTGTC 34888 ||| | || | || |||||||| Sbjct 546 TCTGGAGGGATTCCTTCCTTGTC 524 >seq1027 Length=13177 Score = 89.7 bits (98), Expect = 3e-13 Identities = 106/143 (74%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 34748 ATCATT--TCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTA 34805 |||||| ||||||||||| ||||||||||| |||| ||| || ||||| |||||| Sbjct 4804 ATCATTGTTCCTCCCCTCAGCCTCAAAACCAGATGAAGTGTAGACTCCTTCTGGATGTTA 4863 Query 34806 TAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGG 34865 ||||| | |||| |||| |||| |||| || || || || || || | || || ||| Sbjct 4864 TAGTCAGCAAGGGTTCGGCCATCCTCCAATTGCTTGCCAGCGAAAATCAATCTCTGTTGG 4923 Query 34866 TCTTGCGGCACCCCCTCCTTGTC 34888 || |||| | || ||||| || Sbjct 4924 TCCGGCGGGATACCTTCCTTATC 4946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323707738074336