Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22]
234,012 sequences; 165,656,733 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq87537 105 4e-18
seq18136 102 5e-17
seq1027 89.7 3e-13
>seq87537
Length=233
Score = 105 bits (116), Expect = 4e-18
Identities = 140/192 (73%), Gaps = 8/192 (4%)
Strand=Plus/Minus
Query 34794 TTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATT 34853
||||| ||||||||||||| ||| | || |||| |||||||| || || ||||| ||
Sbjct 232 TTCTGGATGTTATAGTCCGCAAGAGTACGCCCATCTTCCAGCTGCTTCCCTGCAAAGATC 173
Query 34854 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT 34913
|| | ||||||||| |||| | ||| ||||| || ||||| ||| || || |
Sbjct 172 AGCCTTTGCTGGTCCGGCGGGATCCCTTCCTTATCCTGGATCTTGGCTTTAAC--AT--T 117
Query 34914 ATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
||| || || | ||| || || | || ||||| |||||||| ||||| |||||
Sbjct 116 ATCAATGGTATCGGAGCTCTCCACCTCTAGAGTGATGGTCTTTCCCGTTAGAGTTTTCAC 57
Query 34970 AAAGATCTGCAT 34981
||||||||||||
Sbjct 56 AAAGATCTGCAT 45
>seq18136
Length=774
Score = 102 bits (112), Expect = 5e-17
Identities = 109/143 (76%), Gaps = 2/143 (1%)
Strand=Plus/Minus
Query 34748 ATCAT--TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTA 34805
||||| |||||||||| | ||||||||||| |||| ||| |||||||| |||||
Sbjct 666 ATCATAGTTCCTCCCCTAAGCCTCAAAACCAGATGAAGTGTTGACTCTTTCTGGATGTTG 607
Query 34806 TAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGG 34865
||||| | || |||| |||| |||||||| || ||||| || || |||| ||||||
Sbjct 606 TAGTCAGCGAGAGTTCGGCCATCCTCCAGCTGCTTGCCGGCGAAAATCAGTCTCTGCTGG 547
Query 34866 TCTTGCGGCACCCCCTCCTTGTC 34888
||| | || | || ||||||||
Sbjct 546 TCTGGAGGGATTCCTTCCTTGTC 524
>seq1027
Length=13177
Score = 89.7 bits (98), Expect = 3e-13
Identities = 106/143 (74%), Gaps = 2/143 (1%)
Strand=Plus/Plus
Query 34748 ATCATT--TCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTA 34805
|||||| ||||||||||| ||||||||||| |||| ||| || ||||| ||||||
Sbjct 4804 ATCATTGTTCCTCCCCTCAGCCTCAAAACCAGATGAAGTGTAGACTCCTTCTGGATGTTA 4863
Query 34806 TAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGG 34865
||||| | |||| |||| |||| |||| || || || || || || | || || |||
Sbjct 4864 TAGTCAGCAAGGGTTCGGCCATCCTCCAATTGCTTGCCAGCGAAAATCAATCTCTGTTGG 4923
Query 34866 TCTTGCGGCACCCCCTCCTTGTC 34888
|| |||| | || ||||| ||
Sbjct 4924 TCCGGCGGGATACCTTCCTTATC 4946
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323707738074336
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |