Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq88759 143 3e-29 seq57780 118 1e-21 seq88758 102 9e-17 >seq88759 Length=3029 Score = 143 bits (158), Expect = 3e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 48359 ACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACC 48418 |||||||||||| | ||||| || |||| ||| | || | ||||||||| ||||| || Sbjct 1241 ACCTCCTTGATCCACATATCGTGCTGTATCATTAAACACACGTAACATTGGAACAATTCC 1182 Query 48419 ATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGA 48478 ||| ||| | ||||||||||| ||||||||| ||| |||| | |||||| || || Sbjct 1181 ATTGGATGTTCCATTGGTTCCACGAATATAACTGCCAGTAGCACGGATATTATGAACAGA 1122 Query 48479 AATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAAT 48538 || ||| || || || || ||| || | ||||||| || | ||||||||| || Sbjct 1121 AACACCAATTCCTCCAGCAGATTTGCTGATAACAGCACACTCCTTCAAGGTATCATATAT 1062 Query 48539 TCCTTCTATACTATCATCTATCAT 48562 |||||| |||||||||||| |||| Sbjct 1061 TCCTTCAATACTATCATCTTTCAT 1038 >seq57780 Length=6884 Score = 118 bits (130), Expect = 1e-21 Identities = 161/223 (72%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 48360 CCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCA 48419 ||||||||||| | ||| | ||||| || ||| | |||| | ||| |||||||| ||| Sbjct 1209 CCTCCTTGATCAACATAACGAGCAGTGTTATTAAACACTCGAAGCATGGGGACAATGCCA 1150 Query 48420 TTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAA 48479 | ||| | ||||| || || ||||||||| ||| | || | ||||| || ||| Sbjct 1149 TGTGAAGTCCCATTTGTACCACCAATATAACTGCCAGTGGCACGGATATTGTGGATGGAA 1090 Query 48480 ATACCTATACCACCTGCCATTTTAGATATTAGAGCACA--CCGTTTAAGGGTATCATAAA 48537 | |||||| || || || ||| ||| | |||||| || | ||| ||||||| | Sbjct 1089 AGACCTATTCCTCCGGCTGATTTGCTTATAACAGCACATTCCCTCAAAG--TATCATAGA 1032 Query 48538 TTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACT 48580 ||||||| |||||||||||| |||| | ||||||||||| Sbjct 1031 TTCCTTCAATACTATCATCTTTCATGCACAGGAGAAAACAACT 989 >seq88758 Length=3554 Score = 102 bits (112), Expect = 9e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 48359 ACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACC 48418 |||||||||||| | ||| | || || | || | || | ||||||||| ||||| || Sbjct 1352 ACCTCCTTGATCAACATAACGTGCTGTGTCATTGAACACACGTAACATTGGAACAATGCC 1293 Query 48419 ATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGA 48478 ||| ||| | || || ||||| ||||||||| || | || | |||||| || ||| Sbjct 1292 ATTGGATGTTCCGTTAGTTCCACGAATATAACTGCCCGTGGCACGGATATTATGAACTGA 1233 Query 48479 AATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAAT 48538 || ||| || || || || ||| || | |||||| || | ||||||||| || Sbjct 1232 AACACCAATTCCTCCAGCTGATTTGCTGATAACGGCACACTCCTTCAAGGTATCATATAT 1173 Query 48539 TCCTTCTATACTATCATCTATCAT 48562 || || |||||||||||| |||| Sbjct 1172 ACCATCGATACTATCATCTTTCAT 1149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560464547443680