Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq194783 170 2e-36 seq186184 127 2e-23 seq139417 123 2e-22 seq3177 109 4e-18 seq3176 107 2e-17 seq208680 102 7e-16 seq215049 96.9 3e-14 seq143273 87.8 1e-11 seq74168 87.8 1e-11 >seq194783 Length=922 Score = 170 bits (188), Expect = 2e-36 Identities = 536/821 (65%), Gaps = 12/821 (1%) Strand=Plus/Plus Query 551789 TGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTGTT 551846 ||| ||| |||| | |||||||||||||||||||| ||| |||| ||||| | ||| Sbjct 48 TGGTGATACTCACTTGGGTGGCGAAGATTTTGATAACAGAATGGTGAATCAT--TTTGTC 105 Query 551847 GAAGATTTTAAACGAAAAAACAA--AGTTGATCTATCTACATCTGCCAAAGCTCTTCGTC 551904 |||| || || | || || || || ||| | | | ||| ||| | | Sbjct 106 CAAGAGTTCAAGAGGAAGAATAAGAAGGACATCAGTGGTAACC--CCAGAGCATTGAGGA 163 Query 551905 GTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTA 551964 | | ||||||||||| ||||| ||||| | | || || || | ||||||| || | Sbjct 164 GATTGAGAACTGCTTGTGAAAGGGCCAAGAGGACCCTATCGTCCACTGCTCAAACGACAA 223 Query 551965 TTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAAT 552024 | || | ||||| || | ||||| ||||| | | | || | ||| | || || | || Sbjct 224 TCGAGATTGATTCTTTGTACGAGGGCATTGACTTTTACACTACAATTACAAGAGCTAGAT 283 Query 552025 TTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTT-TTA 552083 |||| || | ||| | || |||||| || |||||||| || |||| || Sbjct 284 TTGAGGAGCTGAACATGGATTTATTCAGAAAATGCATGGAACCAGTGGAG-AAGTGCTTG 342 Query 552084 AGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACA 552143 |||||| ||||||| |||||| || || || || | ||||||||||| || || || Sbjct 343 AGAGATGCAAAGATGGATAAAAACAGTGTCCACGATGTGGTGCTTGTTGGGGGCTCAACT 402 Query 552144 AGAATTCCTAAAATTCGCGAAATGTTAAGTTCTTATTTCAATGGTAAAAAATTAAATGAA 552203 || || || || ||| || |||| || |||||||||||| || || | | Sbjct 403 AGGATCCCCAAGGTTCAACAATTGTTGCAGGATTTCTTCAATGGTAAAGAACTATGTAAG 462 Query 552204 AGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCT 552263 ||| | || || ||||| || ||||| |||||||| || |||| || || || | | Sbjct 463 AGTATCAACCCTGATGAAGCGGTTGCATATGGTGCTGCTGTTCAGGCTGCGATCTTGAGT 522 Query 552264 GGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTT 552323 || | | | || || | || | || |||| | ||||| |||||||| || ||| Sbjct 523 GGCGAGGGTAACGAGAAGGTGCAGGACCTTCTACTGCTTGATGTCACTCCTCTGTCCCTT 582 Query 552324 GGTTTAGAAACAGTTGGAGGTATTATGACTAATCTT-ATCGATAGAAATACTACTATTCC 552382 ||| | || || | || || | ||||| | | || || ||| ||||| || || || Sbjct 583 GGTCTGGAGACTGCAGGTGGAGTCATGAC-AGTGTTGATTCCTAGGAATACGACCATACC 641 Query 552383 TTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCA 552442 || || | || || || || || || ||||| || ||| ||| ||||| Sbjct 642 CACCAAGAAGGAGCAAGTGTTCTCCACCTACTCCGATAACCAGCCTGGTGTGTTGATTCA 701 Query 552443 AATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTT 552502 | | || || || |||| || | || || |||| | || | ||| | | Sbjct 702 GGTCTACGAGGGTGAGAGAACCAGGACGAGGGACAACAATCTGTTGGGCAAGTTTGAGCT 761 Query 552503 AGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGA 552562 || ||||||||||| ||| | ||||| || || || | ||| ||||||||| || Sbjct 762 CTCTGGCATTCCTCCTGCACCTAGAGGAGTTCCACAGATCAATGTTTGTTTCGATATTGA 821 Query 552563 TGCCAATGGAATTTTGAATGTGACTGCTTGTGATAAATCTA 552603 || ||||| ||| | ||||| |||| |||||| ||| Sbjct 822 CGCAAATGGTATTCTTAATGTATCTGCGGAAGATAAAACTA 862 >seq186184 Length=1615 Score = 127 bits (140), Expect = 2e-23 Identities = 184/260 (71%), Gaps = 0/260 (0%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || || ||||| ||| | || ||||| || || || ||||| || ||||| |||| | Sbjct 281 GCCATCGGTATTGATCTTGGCACCACTTACAGCTGCGTTGGCGTGTGGCAGAATGATCGT 222 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || || || || ||||||||||| || ||| |||| || |||||||||||| | ||||| Sbjct 221 GTGGAGATCATAGCCAATGATCAGGGCAACCGAACCACGCCATCTTATGTTGCCTTCACC 162 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || ||||||| | | |||| |||||||| || | || | || || || || Sbjct 161 GACACTGAACGTCTCATTGGCGATGCAGCCAAGAACCAGGTTGCTATGAACCCGCAGAAC 102 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 ||| |||| || || || ||| | || || || | || ||| | |||| ||| Sbjct 101 ACTGTTTTCGACGCCAAGCGTCTCATAGGGAGGCGGTTCTCTGACCCTTCTGTGCAGAGT 42 Query 550232 GATATGAAGCATTGGCCTTT 550251 || ||||||||||||||||| Sbjct 41 GACATGAAGCATTGGCCTTT 22 >seq139417 Length=581 Score = 123 bits (136), Expect = 2e-22 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 550310 AAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCC 550369 || || ||| | || || | || || || ||||| || | || ||||| | | |||| Sbjct 117 AAGCAGTTTGCCCCCGAGGAGATATCGTCAATGGTGTTGACAAAGATGAAGGAGATAGCC 176 Query 550370 AGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAAT 550429 |||| | ||||||| ||| |||||| || || || || || |||||||||||| Sbjct 177 GAGGCTTACCTGGGTCAAGCTATTAAGGATGCGGTGATTACAGTGCCTGCATATTTTAAT 236 Query 550430 GACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGT 550489 ||||| ||| | || ||||| || ||||| || |||||| || | |||||| | | Sbjct 237 GACTCGCAAAGGCAGGCTACCAAGGATGCCGGGGCTATTGCCGGGTTGAATGTTTTGAGG 296 Query 550490 ATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527 |||||||| ||||||||||| ||||| |||| ||||| Sbjct 297 ATTATCAACGAACCTACTGCGGCTGCTATTGCTTATGG 334 >seq3177 Length=1092 Score = 109 bits (120), Expect = 4e-18 Identities = 113/148 (76%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 550389 AAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTA 550448 ||||||| | || || | |||||||| || || || || || || || | ||| | Sbjct 663 AAGTTACCAAAGCTGTCGTGACTGTACCTGCCTACTTCAACGATTCTCAGAGGACAGCAA 604 Query 550449 CTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTG 550508 | || |||||||| |||||||||||| | | |||||||| ||||||||||||||||| | Sbjct 603 CAAAGGATGCTGGCCGTATTGCTGGATTGGAAGTTCTTCGGATTATCAATGAACCTACAG 544 Query 550509 CTGCTGCACTTGCATATGGACTTGATAA 550536 ||||| || | |||||||| |||| || Sbjct 543 CTGCTTCATTGGCATATGGGTTTGAAAA 516 >seq3176 Length=1132 Score = 107 bits (118), Expect = 2e-17 Identities = 101/129 (78%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 || || || || || ||||| || || || | ||| || || |||||||| |||||| Sbjct 651 ACGGTGCCTGCTTACTTTAACGATTCTCAGAGGACAGCAACAAAGGATGCTGGCCGTATT 592 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 |||||| | | |||||||| ||||| |||||||||||||||||| || | ||||||||| Sbjct 591 GCTGGATTAGAAGTTCTTCGAATTATTAATGAACCTACTGCTGCTTCATTGGCATATGGA 532 Query 550529 CTTGATAAA 550537 |||| ||| Sbjct 531 TTTGAAAAA 523 >seq208680 Length=997 Score = 102 bits (112), Expect = 7e-16 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 550396 GGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGA 550455 |||||| || | ||||| || || || || || ||||| ||| | || || || || || Sbjct 434 GGATGCGGTGGTCACTGTCCCTGCTTACTTCAACGACTCCCAAAGGCAGGCCACCAAGGA 375 Query 550456 TGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGC 550515 |||||| |||||| || || |||||| | || ||||||||||| || || |||||||| Sbjct 374 TGCTGGTGTTATTGCGGGCCTGAATGTTTTGCGCATTATCAATGAGCCCACAGCTGCTGC 315 Query 550516 ACTTGCATATGGACTTGATAA 550536 |||| ||||| ||||| || Sbjct 314 TATTGCTTATGGTCTTGACAA 294 >seq215049 Length=488 Score = 96.9 bits (106), Expect = 3e-14 Identities = 152/215 (71%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 563263 AGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCT 563322 ||||| | ||| || ||| || || ||||||||| || || || || | ||| Sbjct 7 AGTACCAAATGGAGAGTAGACTCCTTCTGAATATTGTAGTCCGCAAGTGTGCGGCCATCC 66 Query 563323 TCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCT 563382 |||||||| || || ||||| ||||||||||| ||||| || ||||| || || ||||| Sbjct 67 TCAAGTTGCTTCCCAGCAAAGATAAGTCTTTGTTGATCTGGTGGAATGCCCTCCTTATCC 126 Query 563383 TGAATTTTTTGTTTTACTGCCTCAATTGTATC---AGTGTGAGTACATTCGAGAGTAACA 563439 || || ||| || || ||||||||||| | | | | || || | |||| | Sbjct 127 TGGATCTTTGCCTTCACATTATCAATTGTATCTGAACTCTCA--AC-CTCCAACGTAATA 183 Query 563440 GTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||||| || || || || || || ||||||||||| Sbjct 184 GTTTTTCCCGTGAGGGTCTTCACAAAAATTTGCAT 218 >seq143273 Length=304 Score = 87.8 bits (96), Expect = 1e-11 Identities = 153/221 (69%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 563256 GAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 |||||| || |||||||| || || ||| ||||| || || || || || || || Sbjct 304 GAGACGAAGGACAAGATGCAGAGTGGACTCCTTTTGG--ATGTTATAGTCTGCCAGGGTA 247 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | | ||| || || || || || || || || ||||||||||| || || ||||| ||| Sbjct 246 CGTCCATCCTCTAGCTGCTTACCAGCGAAGATCAGTCTTTGCTGGTCCGGGGGAATACCT 187 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGA 563433 || || ||||| ||||| || || ||||| ||||| | | | || | Sbjct 186 TCCTTGTCTTGGATTTTGGCCTTCACATTATCAATAGTATCCGAGCTTTCAACCTCCAAC 127 Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 |||| ||||||||||| ||||| || || || || ||||| Sbjct 126 GTAATGGTTTTACCAGTCAGAGTCTTCACAAAGATCTGCAT 86 >seq74168 Length=710 Score = 87.8 bits (96), Expect = 1e-11 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 ||||| || || ||| | || || || |||||||||||||| | |||||||||| | Sbjct 137 GCTATTGGCATTGATCTTGGCACGACTTATAGTTGTGTTGGGGCGTGGCAAAATGATCGT 78 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || || || || |||||||| ||||| || || || || || ||||| ||| | ||||| Sbjct 77 GTGGAGATCATAGCCAATGACCAAGGCAATAGGACGACACCGTCTTACGTTGCCTTCACT 18 Query 550112 GAAACTGA 550119 || || || Sbjct 17 GATACCGA 10 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4016920390045880