Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_016658.1 Length=47741 Score E Sequences producing significant alignments: (Bits) Value seq98 531 2e-146 >seq98 Length=41871 Score = 531 bits (588), Expect = 2e-146 Identities = 718/997 (72%), Gaps = 10/997 (1%) Strand=Plus/Plus Query 5186 TCAGCAGCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATA 5245 ||| |||| ||||| || || ||||||||||||||||| ||||| ||||| ||||||||| Sbjct 40575 TCAACAGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAACTTCCATA 40634 Query 5246 CCAAGGTTGGCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCA 5305 |||||||| |||||||| | | ||| |||||||| || | | ||| | ||| Sbjct 40635 CCAAGGTTAGCACGGTTGATAATATCAGCCCAAGTATTAATTACACGACCTTGACTATCA 40694 Query 5306 ACGACTGACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATA 5365 || || || || ||||| || || || || | || |||||||||||| || || | | Sbjct 40695 ACTACGGATTGGTTGAAATTGAAACCATTTAAGTTGAAAGCCATAGTGCTAATACCTAAA 40754 Query 5366 GAGGTAAGCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTA 5425 | ||| | ||| || | | || ||||||| ||| |||||||| ||||| ||| Sbjct 40755 GCGGTGAACCAGATACCTATTACAGGCCAAGCAGCTAGGAAGAAGTGTAATGAACGAGAG 40814 Query 5426 TTGTTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATG 5485 ||||| || |||||||| |||||||| | || ||||| || |||||||| || || || Sbjct 40815 TTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATA 40874 Query 5486 TTATACGTTTCTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTT 5545 ||||| ||||| | ||||| || ||||| || || | || ||| | | || Sbjct 40875 TTATAAGTTTCCCCTTCTTGACCAAATTTGTAACCTTCATTAGCAGATTCATTTTCTGTA 40934 Query 5546 GTTTCACGAATGAGCGAA---GAAGTAACAAGACTTCCATGCATAGCAGCGAACAAAGCT 5602 ||||| | ||| | || || || || | |||||||||||| ||| | | Sbjct 40935 GTTTCCC---TGATCAAACTTGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAG 40991 Query 5603 CCACCGAATACCCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCT 5662 || |||||||| || || || || | ||| || || || ||||||||||| ||||| || Sbjct 40992 CCGCCGAATACACCCGCTACGCCTAACATATGAAATGGGTGCATAAGGATGTTGTGCTCA 41051 Query 5663 GCCTGGAATACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTG 5722 ||||||||||| | ||||||||| |||||||||||||| || | ||||||||| || Sbjct 41052 GCCTGGAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAAAGGCATACCGTCCGAA 41111 Query 5723 AAACTTCCCTGTCCGAAAGGGTATACTAAAAATACTGAGTAGGCTGCGGCAACCGGTGCT 5782 || ||||| || || | ||||| | || || || | | ||||| ||||| || ||| Sbjct 41112 AAGCTTCCTTGACCAATTGGGTAAATCAAGAAGACAGCGGTAGCTGCTGCAACAGGAGCT 41171 Query 5783 GAATATGCTACGCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGT 5842 |||||||| || |||||| || ||||| || || | | ||||||||||||| | || Sbjct 41172 GAATATGCAACAGCAATCCAAGGGCGCATACCCAAACGGAAACTAAGTTCCCACTCACGG 41231 Query 5843 CCCAAGTAAGCTGCGATACCAATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCTCCA 5902 |||| |||| || | ||||| | |||||| | || | |||| || || || || Sbjct 41232 CCCATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCG 41291 Query 5903 TTGTAAAGCCATTCATCGA--GATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAA 5960 ||||| | ||||||||| | ||| || |||||||| || || || ||||| || || | Sbjct 41292 TTGTATAACCATTCATCAACGGAT--GCAGCTTCCCATATTGGGTAAAAGTGCAAACCTA 41349 Query 5961 TTGCGTTGGAGCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATC 6020 | ||| || | || | || ||| || || || || |||||||| || |||| ||||| Sbjct 41350 TAGCGGCAGAAGTAGGAATAATGGCACCAGAAATAATATTGTTTCCGTAAAGTAAAGATC 41409 Query 6021 CTGCGACGGGTTCACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATA 6080 | | ||||||||||| || || || || || ||||| || ||||| | ||| || | | Sbjct 41410 CAGAAACGGGTTCACGAATACCATCAATATCTACTGGAGGGGCAGCAATGAAAGCGATAA 41469 Query 6081 TAAATGCAGTAGTTGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAACCACCCCACAT 6140 ||||| ||| ||||||||| || | | || ||||| || ||||||||||| || | | Sbjct 41470 TAAATACAGAAGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAATGT 41529 Query 6141 AGAGGCGGTTGTTGGTGCTAGTAACCCAGTCACAGAA 6177 | || ||||| | |||||| || | ||||| |||||| Sbjct 41530 AAAGACGGTTTTCGGTGCTGGTTATCCAGTTACAGAA 41566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152225403171432