Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq215049 107 1e-18 seq76495 93.3 3e-14 >seq215049 Length=488 Score = 107 bits (118), Expect = 1e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||||||| || || ||| || ||||||||||| || | || | || | || || Sbjct 10 ACCAAATGGAGAGTAGACTCCTTCTGAATATTGTAGTCCGCAAGTGTGCGGCCATCCTCA 69 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | ||||| || ||||| || |||| |||||||| | |||| ||||||||| || Sbjct 70 AGTTGCTTCCCAGCAAAGATAAGTCTTTGTTGATCTGGTGGAATGCCCTCCTTATCCTGG 129 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 |||||| || ||| | | | | ||||| ||| ||||||| |||||| |||||| Sbjct 130 ATCTTTGCCTTCACATTATCAATTGTATCTGAACTCTCAACCTCCAACGTAATAGTTTTT 189 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| | || || |||||||| ||||| Sbjct 190 CCCGTGAGGGTCTTCACAAAAATTTGCAT 218 >seq76495 Length=1287 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622 ||| || ||| ||| ||||| || ||||| || | | | || | || |||| ||| Sbjct 629 ATGCAGAGTGGACTCCTTTTGGATGTTGTAGTCCGCCAAGGTACGCCCATCCTCCAGCTG 570 Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682 |||||| ||||| |||| | ||| || || | ||||| ||| |||||||| || || Sbjct 569 CTTACCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATTTT 510 Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742 ||| ||| | | | || || || ||||||||||| ||||| ||||| || || Sbjct 509 AGCTTTCACATTATCAATAGTATCAGAGCTCTCCACCTCCAAGGTAATGGTTTTCCCAGT 450 Query 48743 CAAAGTTTTTACAAAAATCTGCAT 48766 || || || ||||| |||||||| Sbjct 449 CAGCGTCTTAACAAATATCTGCAT 426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379851157869876