Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_019443.1 Length=172879 Score E Sequences producing significant alignments: (Bits) Value seq98 580 1e-160 >seq98 Length=41871 Score = 580 bits (642), Expect = 1e-160 Identities = 701/953 (74%), Gaps = 6/953 (1%) Strand=Plus/Minus Query 162541 GGTTGGTTCGGTGTCTTGATGATCCCTTGCTTGCTCGCAGCAGCAACTTGCTTCATCATT 162600 || ||||| ||||| |||||||||||| || | | ||| | || || || || Sbjct 41524 GGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACTTCTGTATTTATTATC 41465 Query 162601 GCATTCATTGCAGCACCTCCAGTTGATATCGATGGTATCAGAGAACCTGTTGCAGGTTCA 162660 || |||||||| || |||||||| ||||| |||||||| | ||||| ||| | || || Sbjct 41464 GCTTTCATTGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAACCCGTTTCTGGATCT 41405 Query 162661 CTTCTCTATGGTAACAACATCATCTCTGGTGCTGTCGTTCCTAGTTCAAATGCTATTGGT 162720 | || || || ||||| || || |||||||| | |||||| ||| ||||| ||| Sbjct 41404 TTACTTTACGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTCTGCCGCTATAGGT 41345 Query 162721 CTTCACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGTTGTATAATGGTGGA 162780 | ||||| || || || |||||||| ||| | ||||||| ||||| || || || || Sbjct 41344 TTGCACTTTTACCCAATATGGGAAGCTGCATCCGTTGATGAATGGTTATACAACGGCGGT 41285 Query 162781 CCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACAGCATACTGTGGTCGTCAG 162840 |||| |||| | || | |||||| | | || | | ||| || ||| || Sbjct 41284 CCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGCCGTGAG 41225 Query 162841 TGGGAACTTTCTTACCGCTTAGGTATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCA 162900 ||||||||| || ||| || |||||||| |||||||| ||||||||| || || || Sbjct 41224 TGGGAACTTAGTTTCCGTTTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCT 41165 Query 162901 GTATCTGCAGCATTCGCTGTGTTCTTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGAC 162960 || | ||||| |||||| |||||| | || || | |||||||| || || ||| Sbjct 41164 GTTGCAGCAGCTACCGCTGTCTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCGGAC 41105 Query 162961 GCAATGCCTCTTGGTATTTCTGGTACTTTTAACTACATGTTCGTGTTCCAAGCAGAGCAC 163020 | |||||| | || || ||||||||||| |||| ||| | || ||||| || |||||| Sbjct 41104 GGTATGCCTTTAGGAATCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCAC 41045 Query 163021 AACATCCTAATGCACCCCTTCCATATGATTGGAGTCGCAGGTGTATTCGGTGGTTCACTC 163080 |||||||| |||||||| || |||||| | || || || ||||||||||| || || || Sbjct 41044 AACATCCTTATGCACCCATTTCATATGTTAGGCGTAGCGGGTGTATTCGGCGGCTCCCTA 40985 Query 163081 TTTAGTGCTATGCACGGTTCTCTTGTTACTTCTTCTCTTATCAGAGAAACTACTGAGCAA 163140 || ||||||||||| ||||| | || || || | | ||||| |||||||| || | Sbjct 40984 TTCAGTGCTATGCATGGTTCCTTGGTAACCTCAAGTTTGATCAGGGAAACTACAGAAAAT 40925 Query 163141 GAGTCACAGAACTACGGTTATAAGTTCGGACAAGAAGAAGAGACTTACAACATTGTTGCT 163200 || || || | ||||| || || || ||||||| || ||||| || || || || Sbjct 40924 GAATCTGCTAATGAAGGTTACAAATTTGGTCAAGAAGGGGAAACTTATAATATCGTAGCC 40865 Query 163201 GCTCATGGATACTTTGGTCGCTTGATCTTCCAGTATGCATCTTTCAACAACTCACGTTCA 163260 |||||||| || ||||| || ||||||||||| ||||| |||||||||||| |||||| Sbjct 40864 GCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCA 40805 Query 163261 CTTCACTTCTTCCTTGCTGCATTCCCTGTGGTCTGCATCTGGTTCACTGCAATGGGTGTG 163320 | ||||||||||| ||||| | ||||| | | ||||||||||| || | ||| | Sbjct 40804 TTACACTTCTTCCTAGCTGCTTGGCCTGTAATAGGTATCTGGTTCACCGCTTTAGGTATT 40745 Query 163321 TCAACTATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATCCGTCGTTGA---CGCA 163377 |||||||| |||||| | || |||||||| |||||||||||||| ||||| | Sbjct 40744 AGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAA 40685 Query 163378 GGTGGTAAAGTGATTCCTACTTGGGCAGATATCCTTAACAGAGCAGGACTTGGTATGGAA 163437 ||| || || ||| ||||||||| ||||| | ||| | || |||||||||||| Sbjct 40684 GGTCGT---GTAATTAATACTTGGGCTGATATTATCAACCGTGCTAACCTTGGTATGGAA 40628 Query 163438 GTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGCTGCTGA 163490 |||||||| || |||||||||||||||||||| || ||||| ||||||| ||| Sbjct 40627 GTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGA 40575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 551466943997280