Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_019444.1 Length=176043 Score E Sequences producing significant alignments: (Bits) Value seq98 560 1e-154 seq28 527 7e-145 >seq98 Length=41871 Score = 560 bits (620), Expect = 1e-154 Identities = 722/994 (73%), Gaps = 2/994 (0%) Strand=Plus/Minus Query 162891 TTTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACT 162950 |||||| | ||| |||| ||| | ||||| || || | || ||||| || || | Sbjct 41567 TTTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTT 41508 Query 162951 GATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTC 163009 |||||| || ||| | ||| | |||||| ||||| || || |||| ||| | ||||| | Sbjct 41507 GATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCC 41449 Query 163010 CCCCTGTGGACATTGACGGCATCCGTGAGCCCGTCGCTGGTTCACTCATGTATGGCAACA 163069 | || || || ||||| || || ||||| ||||| |||| || | | || || |||| Sbjct 41448 CTCCAGTAGATATTGATGGTATTCGTGAACCCGTTTCTGGATCTTTACTTTACGGAAACA 41389 Query 163070 ACATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCA 163129 | || || |||||||| || |||| |||| ||| || ||| | ||||| || || | Sbjct 41388 ATATTATTTCTGGTGCCATTATTCCTACTTCTGCCGCTATAGGTTTGCACTTTTACCCAA 41329 Query 163130 TCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAG 163189 | |||||||| ||||| ||||||| ||| | || ||||| ||||||| |||| | | Sbjct 41328 TATGGGAAGCTGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTG 41269 Query 163190 TCTTTCACTTCCTTATCGGCATCTATGCATATATGGGACGTGAATGGGAACTTTCATATC 163249 | | |||||| | | || | | || ||||| ||||| ||||||||| | | Sbjct 41268 TTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGCCGTGAGTGGGAACTTAGTTTCC 41209 Query 163250 GCTTAGGTATGCGCCCCTGGATCTGTGTAGCATACTCTGCACCTGTTGCAGCAGCATCCG 163309 | || ||||||||||| ||||| ||| ||||| || || |||||||||||||| ||| Sbjct 41208 GTTTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCTACCG 41149 Query 163310 CAGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCACTTGGCA 163369 | |||||| || | || || | |||||||| || || |||| ||||| | || | Sbjct 41148 CTGTCTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCGGACGGTATGCCTTTAGGAA 41089 Query 163370 TCTCTGGCACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACC 163429 ||||||| || ||||||| ||| |||| ||||| || |||||||||||||| ||||||| Sbjct 41088 TCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACC 41029 Query 163430 CCTTCCATATGTTGGGAGTCGCTGGTGTCTTCGGTGGATCACTCTTCTCGGCAATGCATG 163489 | || |||||||| || || || ||||| ||||| || || || ||| || ||||||| Sbjct 41028 CATTTCATATGTTAGGCGTAGCGGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATG 40969 Query 163490 GCAGTCTTGTTACCTCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAAAACTATG 163549 | | || ||||| | || | || || || |||| ||| || || | | Sbjct 40968 GTTCCTTGGTAACCTCAAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAG 40909 Query 163550 GTTACAAGTTTGGTCAAGAAGAAGAGACATACAACATCGTTGCAGCACATGGCTACTTCG 163609 ||||||| ||||||||||||| || || || || ||||| || || ||||| || || | Sbjct 40908 GTTACAAATTTGGTCAAGAAGGGGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTG 40849 Query 163610 GTCGTTTGATCTTCCAATATGCATCATTCAACAACAGCAGAAGTCTTCACTTCTTCCTGG 163669 | || ||||||||||||||||| ||||||||| | | ||||||||||| | Sbjct 40848 GCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCATTACACTTCTTCCTAG 40789 Query 163670 CAGCATGGCCTGTCGTCGGAATCTGGTTTACTGCACTGGGCGTAAGCACCATGGCATTCA 163729 | || |||||||| | || |||||||| || || | || | ||||| ||||| |||| Sbjct 40788 CTGCTTGGCCTGTAATAGGTATCTGGTTCACCGCTTTAGGTATTAGCACTATGGCTTTCA 40729 Query 163730 ACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGCTCAACA 163789 || | || |||||||| |||||||| ||| | ||||| |||| |||||||| | || | Sbjct 40728 ACTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAATA 40669 Query 163790 CTTGGGCAGACGTGCTTAACCGCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACG 163849 ||||||| || | | ||||| ||| || |||||||||||||||||||| ||||| | Sbjct 40668 CTTGGGCTGATATTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 40609 Query 163850 CACACAACTTCCCACTCGATCTTGCTGCTGCTGA 163883 | ||||||||||| || || || ||||||| ||| Sbjct 40608 CTCACAACTTCCCTCTAGACCTAGCTGCTGTTGA 40575 >seq28 Length=37419 Score = 527 bits (584), Expect = 7e-145 Identities = 725/1008 (72%), Gaps = 4/1008 (0%) Strand=Plus/Minus Query 164619 GATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGGTGGTCTGGATTACTACTTCTT 164678 ||||||||| | | || || |||||||| || || ||||| || || | || || Sbjct 31317 GATGACTGGTTGCGGAGGGACCGTTTTGTTTTCGTAGGTTGGTCCGGTCTATTGCTCTTT 31258 Query 164679 CCCACTGCTTATCTGGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTCACGAGTTGG 164738 || ||| || | || | || |||||| | || || ||| ||||||| || ||| Sbjct 31257 CCTTGTGCCTACTTTGCTTTAGGGGGTTGGTTCACAGGTACAACTTTTGTAACCTCCTGG 31198 Query 164739 TACACCCATGGTCTTGCTTCTTCCTATCTTGAAGG-TGCTAACTTTCTCACAGCAGCTGT 164797 || |||||||| | || |||||| | ||||| ||| ||||| | || || || || Sbjct 31197 TATACCCATGGATTGGCCAGCTCCTATTTGGAAGGCTGC-AACTTCTTAACCGCTGCAGT 31139 Query 164798 CTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCA 164857 || || |||||| || | | | |||||| | | |||| ||||||||||| | || Sbjct 31138 TTCTACCCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAGCGCA 31079 Query 164858 GGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATGGAATTTCGTGGCTCTCCACGG 164917 ||| |||| || ||||| ||| | || || || |||| ||| || ||||||||||| Sbjct 31078 AGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCACGG 31019 Query 164918 TGCCTTCGCCCTAATTGGTTTCATGCTCCGCCAGTTTGAGCTGGCACGTCTCATTGGTAT 164977 || |||| ||||| ||||| ||| | || || ||||| | || || || || || Sbjct 31018 AGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAAATTGCTCGA-TCCGTGCAAT 30960 Query 164978 C-CGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCC 165036 || ||||| ||||| || || || |||||||| |||||||||||||| || |||| Sbjct 30959 TGCGACCTTATAATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTCC 30900 Query 165037 TTATCTACCCACTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAA 165096 | || || || || ||||| ||| ||||||| || || || ||||| || ||||| | Sbjct 30899 TGATTTATCCGCTAGGTCAATCCGGTTGGTTCTTTGCACCTAGTTTTGGTGTAGCAGCTA 30840 Query 165097 TCTTTAGATTCCTGTTGTTCCTTCAAGGATTCCACAACTGGACCCTCAACCCCTTCCATA 165156 | ||| ||||| | |||| | ||||| || || || ||||| || ||||| || |||| Sbjct 30839 TATTTCGATTCATCCTGTTTTTCCAAGGGTTTCATAATTGGACACTGAACCCGTTTCATA 30780 Query 165157 TGATGGGTGTTGCAGGTATCTTGGGAGGAGCATTGCTATCTGCTATTCATGGAGTCACAG 165216 ||||||| ||||| ||| | ||||| | || |||| | ||||||||||| | || | Sbjct 30779 TGATGGGAGTTGCTGGTGTATTGGGCGCGGCTCTGCTGTGCGCTATTCATGGTGCTACTG 30720 Query 165217 TTGAAAATACATTATACGAGGATGGAGAGCAGGCAAATACCTTTAAGGCGTTTGATTCGA 165276 | |||||||| |||| || || || || |||||||| || || ||| | | | Sbjct 30719 TCGAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTCCGCGCTTTTAACCCAA 30660 Query 165277 CACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCG 165336 | || | ||||| |||||||| |||||||| || |||||||| ||||| || ||||| | Sbjct 30659 CTCAAGCCGAAGAAACTTATTCAATGGTCACCGCCAACCGCTTTTGGTCCCAAATCTTTG 30600 Query 165337 GCATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGG 165396 | |||| ||||| || || || ||| | ||||| || ||||| ||||| || || | | Sbjct 30599 GGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACTG 30540 Query 165397 GTCTTTGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATT 165456 || | |||| | || |||| | | ||||| ||||| ||||| ||||| || || | Sbjct 30539 GTTTATGGATGAGCGCTCTTGGAGTAGTAGGTCTGGCTCTGAACCTGCGTGCCTATGACT 30480 Query 165457 TCGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACCTTCTACACCAAAA 165516 |||| |||||| ||| | ||||| |||||||| ||||||||||| ||||| ||||||| Sbjct 30479 TCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTATACCAAAA 30420 Query 165517 ACATCCTATTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCCCATGAAA 165576 | || || || |||||||| | ||||||||| |||| || ||||| || ||||||| Sbjct 30419 ATATTCTTTTAAATGAAGGCATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAA 30360 Query 165577 ACTTTATCTTCCCAGAAGAAGTATTGCCTAGAGGCAACGCCCTTTAAT 165624 || |||| ||||| || || || | || | || ||||| ||||||| Sbjct 30359 ACCTTATATTCCCCGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAAT 30312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561562127438560