Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22]
234,012 sequences; 165,656,733 total letters
Query= NC_019516.1
Length=161440
Score E
Sequences producing significant alignments: (Bits) Value
seq98 585 3e-162
seq28 524 8e-144
>seq98
Length=41871
Score = 585 bits (648), Expect = 3e-162
Identities = 702/951 (74%), Gaps = 2/951 (0%)
Strand=Plus/Minus
Query 8290 GGCTGGTTTGGCGTTCTCATGATCCCAACCCTTCTTG-CCGCTACAATTTGCTTCATTAC 8348
|| |||||||| ||| | |||||||| || || ||| |||| || | || ||||
Sbjct 41524 GGATGGTTTGGTGTTTTGATGATCCCTACT-TTATTGACCGCAACTTCTGTATTTATTAT 41466
Query 8349 CGCATTCGTTGCTGCTCCTCCTGTGGACATCGACGGCATCCGCGAACCAGTTGCTGGATC 8408
||| ||| ||||||| ||||| || || || || || || || ||||| ||| |||||||
Sbjct 41465 CGCTTTCATTGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAACCCGTTTCTGGATC 41406
Query 8409 TCTCATGTACGGTAACAACATCATCTCTGGTGCAGTTGTTCCCAGCTCTAACGCAATTGG 8468
| | | ||||| ||||| || || |||||||| || |||| | ||| ||| || ||
Sbjct 41405 TTTACTTTACGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTCTGCCGCTATAGG 41346
Query 8469 CCTCCACTTCTACCCCATCTGGGAAGCCGCTTCTCTTGATGAGTGGCTCTACAACGGTGG 8528
| ||||| ||||| || |||||||| || || ||||||| ||| | |||||||| ||
Sbjct 41345 TTTGCACTTTTACCCAATATGGGAAGCTGCATCCGTTGATGAATGGTTATACAACGGCGG 41286
Query 8529 TCCTTACCAGCTTGTAGTTTTCCACTTCCTCCTTGGCGTCTTTGCTTATATGGGTCGTGA 8588
|||||| | || | ||| | |||||| | ||||| || | ||| ||||| |||||
Sbjct 41285 TCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGCCGTGA 41226
Query 8589 ATGGGAACTTTCTTACCGCCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCTCC 8648
||||||||| || ||| | || ||||| |||||||| ||||||||| || |||||
Sbjct 41225 GTGGGAACTTAGTTTCCGTTTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCC 41166
Query 8649 TGTTGCCGCTGCTTCTGCTGTATTCCTTGTCTATCCTTTTGGTCAAGGTTCGTTCTCTGA 8708
|||||| || ||| | ||||| ||| | | || || |||||||||| || || ||
Sbjct 41165 TGTTGCAGCAGCTACCGCTGTCTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCGGA 41106
Query 8709 TGGTATGCCTCTTGGTATCTCCGGTACGTTCAACTATATGCTTGTCTTCCAGGCTGAGCA 8768
||||||||| | || ||||| ||||| ||||||| |||| |||| ||||||||||||||
Sbjct 41105 CGGTATGCCTTTAGGAATCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCA 41046
Query 8769 CAACATCCTGATGCACCCCTTCCACATGCTTGGTGTTGCTGGTGTCTTCGGCGGATCTCT 8828
||||||||| |||||||| || || ||| | || || || ||||| |||||||| || ||
Sbjct 41045 CAACATCCTTATGCACCCATTTCATATGTTAGGCGTAGCGGGTGTATTCGGCGGCTCCCT 40986
Query 8829 CTTTTCCGCAATGCATGGTTCACTCGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAC 8888
|| || ||||||||||| | || || || || | | || || || ||||
Sbjct 40985 ATTCAGTGCTATGCATGGTTCCTTGGTAACCTCAAGTTTGATCAGGGAAACTACAGAAAA 40926
Query 8889 CGAGTCTCAAAACTATGGCTACAAGTTCGGTCAAGAAGAGGAAACTTACAACATTGTTGC 8948
|| ||| || | || ||||| || |||||||||| ||||||||| || || || ||
Sbjct 40925 TGAATCTGCTAATGAAGGTTACAAATTTGGTCAAGAAGGGGAAACTTATAATATCGTAGC 40866
Query 8949 CGCTCATGGCTACTTTGGTCGCTTGATCTTCCAATATGCATCTTTTAACAATTCTAGAAG 9008
||||||||| || ||||| || ||||||||||||||||| ||| ||||| ||| |
Sbjct 40865 CGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTC 40806
Query 9009 CTTGCATTTCTTCCTCGCTGCGTGGCCTGTGGTGGGAATCTGGTTTACCGCCCTCGGCGT 9068
|| || |||||||| ||||| |||||||| | || |||||||| ||||| | || |
Sbjct 40805 ATTACACTTCTTCCTAGCTGCTTGGCCTGTAATAGGTATCTGGTTCACCGCTTTAGGTAT 40746
Query 9069 CTCGACCATGGCTTTCAACCTCAATGGCTTCAACTTCAACCAGTCCATTATCGACGGACA 9128
|| |||||||||||| | ||||| ||||| |||||||| ||| | | || | ||
Sbjct 40745 TAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCA 40686
Query 9129 AGGACGAGTGCTCAACACCTGGGCAGACGTACTTAACCGCGCAGGACTCGGTATGGAAGT 9188
||| || || | || || ||||| || | | ||||| || || |||||||||||
Sbjct 40685 AGGTCGTGTAATTAATACTTGGGCTGATATTATCAACCGTGCTAACCTTGGTATGGAAGT 40626
Query 9189 CATGCACGAAAGAAACGCACACAACTTCCCGCTTGACCTTGCGGCTGCTGA 9239
||||| ||| | || || ||||||||||| || ||||| || |||| |||
Sbjct 40625 TATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGA 40575
>seq28
Length=37419
Score = 524 bits (580), Expect = 8e-144
Identities = 717/999 (72%), Gaps = 2/999 (0%)
Strand=Plus/Minus
Query 9815 TTTGACATCCTTGATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGTTGGTCTGGA 9874
||||| || | ||||||||| | | || || |||||||| || |||||||| ||
Sbjct 31329 TTTGATATTATGGATGACTGGTTGCGGAGGGACCGTTTTGTTTTCGTAGGTTGGTCCGGT 31270
Query 9875 CTACTTCTTTTTCCCACTGCTTATCTTGCAATTGGTGGCTGGCTTACTGGCACTACGTTT 9934
||| | || ||||| ||| || |||| | || || ||| | || || || || |||
Sbjct 31269 CTATTGCTCTTTCCTTGTGCCTACTTTGCTTTAGGGGGTTGGTTCACAGGTACAACTTTT 31210
Query 9935 GTCACGAGTTGGTACACTCACGGACTTGCAAGTAGTTACCTTGAGGG-TGCTAATTTCCT 9993
|| || ||||| || || ||| | || || || | || || ||| || ||| |
Sbjct 31209 GTAACCTCCTGGTATACCCATGGATTGGCCAGCTCCTATTTGGAAGGCTGC-AACTTCTT 31151
Query 9994 TACAGCGGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGG 10053
|| || || || || || |||||| || | | | |||||| | | |||| |||||
Sbjct 31150 AACCGCTGCAGTTTCTACCCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGG 31091
Query 10054 TCCTGAGTCTCAGGGAGATTTCGTCCGCTGGATCCAGCTTGGGGGACTCTGGGCTTTTGT 10113
|||||| | || || ||||| || ||| || | || || || ||| |||||||
Sbjct 31090 TCCTGAAGCGCAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGT 31031
Query 10114 GGCGCTCCACGGAGCCTTCGCTTTAATCGGCTTTATGTTACGCCAGTTTGAGCTGGCGAG 10173
|| ||||||||||| |||| |||| || ||||||||||| || ||||| | || |
Sbjct 31030 TGCTCTCCACGGAGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAAATTGCTCG 30971
Query 10174 ATTAATTGGAATCCGACCTTACAATGCTATCGCGTTTTCTGGGCCTATTGCTGTTTTTGT 10233
|| | | | |||||||| ||||| ||||| |||||||| || ||||||||||||||
Sbjct 30970 ATCCGTGCAATTGCGACCTTATAATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGT 30911
Query 10234 CAGTGTTTTCCTCATCTATCCACTCGGACAGTCTAGTTGGTTCTTTGCGCCGAGTTTCGG 10293
||| ||||| || ||||| || || || || ||||||||||||| || ||||| ||
Sbjct 30910 TTCTGTATTCCTGATTTATCCGCTAGGTCAATCCGGTTGGTTCTTTGCACCTAGTTTTGG 30851
Query 10294 CGTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAA 10353
|| || || || || || ||| | || || |||| || |||||||||||||| || ||
Sbjct 30850 TGTAGCAGCTATATTTCGATTCATCCTGTTTTTCCAAGGGTTTCATAATTGGACACTGAA 30791
Query 10354 TCCCTTCCATATGATGGGAGTTGCTGGTATACTGGGAGGGGCGCTCCTATCAGCAATCCA 10413
|| || ||||||||||||||||||||| || |||| | ||| || || | || || ||
Sbjct 30790 CCCGTTTCATATGATGGGAGTTGCTGGTGTATTGGGCGCGGCTCTGCTGTGCGCTATTCA 30731
Query 10414 CGGAGTCACTGTAGAAAACACACTTTATCAAGATGGCGAACAAGCAAACACTTTCAAAGC 10473
|| | ||||| ||||| || | | | |||| || || ||||| || ||| ||
Sbjct 30730 TGGTGCTACTGTCGAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTCCGCGC 30671
Query 10474 TTTTGATAGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTC 10533
|||| | ||||||| ||||| || ||||| ||||| || || ||||| || |||||
Sbjct 30670 TTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCCAACCGCTTTTGGTC 30611
Query 10534 CCAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTGT 10593
||| || ||||| |||||||| ||||||||| ||| | |||||||||||| | |||||
Sbjct 30610 CCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 30551
Query 10594 ACCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATCTTCG 10653
||| || | ||| | |||| || ||||| | | ||||| ||||| || || ||
Sbjct 30550 ACCAGTAACTGGTTTATGGATGAGCGCTCTTGGAGTAGTAGGTCTGGCTCTGAACCTGCG 30491
Query 10654 TGCTTACGATTTTGTATCTCAAGAGATCAGGGCGTCAGAAGATCCTGAATTTGAGACGTT 10713
||| || || || || ||||| || ||| | || | |||||||||||||||||||| ||
Sbjct 30490 TGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTT 30431
Query 10714 CTATACGAAGAATATCCTTCTGAACGAAGGTCTTCGTGCATGGATGGCACCAGTTGACCA 10773
|||||| || ||||| ||| | || ||||| ||||||| |||||||| | || ||
Sbjct 30430 CTATACCAAAAATATTCTTTTAAATGAAGGCATTCGTGCTTGGATGGCGGCTCAAGATCA 30371
Query 10774 ACCACACGAAAGCTTTGTTTTCCCAGAAGAAGTTCTTCC 10812
|| || |||| | || | ||||| || || ||||| ||
Sbjct 30370 GCCTCATGAAAACCTTATATTCCCCGAGGAGGTTCTACC 30332
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 514969218528000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |