Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_019516.1 Length=161440 Score E Sequences producing significant alignments: (Bits) Value seq98 585 3e-162 seq28 524 8e-144 >seq98 Length=41871 Score = 585 bits (648), Expect = 3e-162 Identities = 702/951 (74%), Gaps = 2/951 (0%) Strand=Plus/Minus Query 8290 GGCTGGTTTGGCGTTCTCATGATCCCAACCCTTCTTG-CCGCTACAATTTGCTTCATTAC 8348 || |||||||| ||| | |||||||| || || ||| |||| || | || |||| Sbjct 41524 GGATGGTTTGGTGTTTTGATGATCCCTACT-TTATTGACCGCAACTTCTGTATTTATTAT 41466 Query 8349 CGCATTCGTTGCTGCTCCTCCTGTGGACATCGACGGCATCCGCGAACCAGTTGCTGGATC 8408 ||| ||| ||||||| ||||| || || || || || || || ||||| ||| ||||||| Sbjct 41465 CGCTTTCATTGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAACCCGTTTCTGGATC 41406 Query 8409 TCTCATGTACGGTAACAACATCATCTCTGGTGCAGTTGTTCCCAGCTCTAACGCAATTGG 8468 | | | ||||| ||||| || || |||||||| || |||| | ||| ||| || || Sbjct 41405 TTTACTTTACGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTCTGCCGCTATAGG 41346 Query 8469 CCTCCACTTCTACCCCATCTGGGAAGCCGCTTCTCTTGATGAGTGGCTCTACAACGGTGG 8528 | ||||| ||||| || |||||||| || || ||||||| ||| | |||||||| || Sbjct 41345 TTTGCACTTTTACCCAATATGGGAAGCTGCATCCGTTGATGAATGGTTATACAACGGCGG 41286 Query 8529 TCCTTACCAGCTTGTAGTTTTCCACTTCCTCCTTGGCGTCTTTGCTTATATGGGTCGTGA 8588 |||||| | || | ||| | |||||| | ||||| || | ||| ||||| ||||| Sbjct 41285 TCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGCCGTGA 41226 Query 8589 ATGGGAACTTTCTTACCGCCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCTCC 8648 ||||||||| || ||| | || ||||| |||||||| ||||||||| || ||||| Sbjct 41225 GTGGGAACTTAGTTTCCGTTTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCC 41166 Query 8649 TGTTGCCGCTGCTTCTGCTGTATTCCTTGTCTATCCTTTTGGTCAAGGTTCGTTCTCTGA 8708 |||||| || ||| | ||||| ||| | | || || |||||||||| || || || Sbjct 41165 TGTTGCAGCAGCTACCGCTGTCTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCGGA 41106 Query 8709 TGGTATGCCTCTTGGTATCTCCGGTACGTTCAACTATATGCTTGTCTTCCAGGCTGAGCA 8768 ||||||||| | || ||||| ||||| ||||||| |||| |||| |||||||||||||| Sbjct 41105 CGGTATGCCTTTAGGAATCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCA 41046 Query 8769 CAACATCCTGATGCACCCCTTCCACATGCTTGGTGTTGCTGGTGTCTTCGGCGGATCTCT 8828 ||||||||| |||||||| || || ||| | || || || ||||| |||||||| || || Sbjct 41045 CAACATCCTTATGCACCCATTTCATATGTTAGGCGTAGCGGGTGTATTCGGCGGCTCCCT 40986 Query 8829 CTTTTCCGCAATGCATGGTTCACTCGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAC 8888 || || ||||||||||| | || || || || | | || || || |||| Sbjct 40985 ATTCAGTGCTATGCATGGTTCCTTGGTAACCTCAAGTTTGATCAGGGAAACTACAGAAAA 40926 Query 8889 CGAGTCTCAAAACTATGGCTACAAGTTCGGTCAAGAAGAGGAAACTTACAACATTGTTGC 8948 || ||| || | || ||||| || |||||||||| ||||||||| || || || || Sbjct 40925 TGAATCTGCTAATGAAGGTTACAAATTTGGTCAAGAAGGGGAAACTTATAATATCGTAGC 40866 Query 8949 CGCTCATGGCTACTTTGGTCGCTTGATCTTCCAATATGCATCTTTTAACAATTCTAGAAG 9008 ||||||||| || ||||| || ||||||||||||||||| ||| ||||| ||| | Sbjct 40865 CGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTC 40806 Query 9009 CTTGCATTTCTTCCTCGCTGCGTGGCCTGTGGTGGGAATCTGGTTTACCGCCCTCGGCGT 9068 || || |||||||| ||||| |||||||| | || |||||||| ||||| | || | Sbjct 40805 ATTACACTTCTTCCTAGCTGCTTGGCCTGTAATAGGTATCTGGTTCACCGCTTTAGGTAT 40746 Query 9069 CTCGACCATGGCTTTCAACCTCAATGGCTTCAACTTCAACCAGTCCATTATCGACGGACA 9128 || |||||||||||| | ||||| ||||| |||||||| ||| | | || | || Sbjct 40745 TAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCA 40686 Query 9129 AGGACGAGTGCTCAACACCTGGGCAGACGTACTTAACCGCGCAGGACTCGGTATGGAAGT 9188 ||| || || | || || ||||| || | | ||||| || || ||||||||||| Sbjct 40685 AGGTCGTGTAATTAATACTTGGGCTGATATTATCAACCGTGCTAACCTTGGTATGGAAGT 40626 Query 9189 CATGCACGAAAGAAACGCACACAACTTCCCGCTTGACCTTGCGGCTGCTGA 9239 ||||| ||| | || || ||||||||||| || ||||| || |||| ||| Sbjct 40625 TATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGA 40575 >seq28 Length=37419 Score = 524 bits (580), Expect = 8e-144 Identities = 717/999 (72%), Gaps = 2/999 (0%) Strand=Plus/Minus Query 9815 TTTGACATCCTTGATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGTTGGTCTGGA 9874 ||||| || | ||||||||| | | || || |||||||| || |||||||| || Sbjct 31329 TTTGATATTATGGATGACTGGTTGCGGAGGGACCGTTTTGTTTTCGTAGGTTGGTCCGGT 31270 Query 9875 CTACTTCTTTTTCCCACTGCTTATCTTGCAATTGGTGGCTGGCTTACTGGCACTACGTTT 9934 ||| | || ||||| ||| || |||| | || || ||| | || || || || ||| Sbjct 31269 CTATTGCTCTTTCCTTGTGCCTACTTTGCTTTAGGGGGTTGGTTCACAGGTACAACTTTT 31210 Query 9935 GTCACGAGTTGGTACACTCACGGACTTGCAAGTAGTTACCTTGAGGG-TGCTAATTTCCT 9993 || || ||||| || || ||| | || || || | || || ||| || ||| | Sbjct 31209 GTAACCTCCTGGTATACCCATGGATTGGCCAGCTCCTATTTGGAAGGCTGC-AACTTCTT 31151 Query 9994 TACAGCGGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGG 10053 || || || || || || |||||| || | | | |||||| | | |||| ||||| Sbjct 31150 AACCGCTGCAGTTTCTACCCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGG 31091 Query 10054 TCCTGAGTCTCAGGGAGATTTCGTCCGCTGGATCCAGCTTGGGGGACTCTGGGCTTTTGT 10113 |||||| | || || ||||| || ||| || | || || || ||| ||||||| Sbjct 31090 TCCTGAAGCGCAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGT 31031 Query 10114 GGCGCTCCACGGAGCCTTCGCTTTAATCGGCTTTATGTTACGCCAGTTTGAGCTGGCGAG 10173 || ||||||||||| |||| |||| || ||||||||||| || ||||| | || | Sbjct 31030 TGCTCTCCACGGAGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAAATTGCTCG 30971 Query 10174 ATTAATTGGAATCCGACCTTACAATGCTATCGCGTTTTCTGGGCCTATTGCTGTTTTTGT 10233 || | | | |||||||| ||||| ||||| |||||||| || |||||||||||||| Sbjct 30970 ATCCGTGCAATTGCGACCTTATAATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGT 30911 Query 10234 CAGTGTTTTCCTCATCTATCCACTCGGACAGTCTAGTTGGTTCTTTGCGCCGAGTTTCGG 10293 ||| ||||| || ||||| || || || || ||||||||||||| || ||||| || Sbjct 30910 TTCTGTATTCCTGATTTATCCGCTAGGTCAATCCGGTTGGTTCTTTGCACCTAGTTTTGG 30851 Query 10294 CGTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAA 10353 || || || || || || ||| | || || |||| || |||||||||||||| || || Sbjct 30850 TGTAGCAGCTATATTTCGATTCATCCTGTTTTTCCAAGGGTTTCATAATTGGACACTGAA 30791 Query 10354 TCCCTTCCATATGATGGGAGTTGCTGGTATACTGGGAGGGGCGCTCCTATCAGCAATCCA 10413 || || ||||||||||||||||||||| || |||| | ||| || || | || || || Sbjct 30790 CCCGTTTCATATGATGGGAGTTGCTGGTGTATTGGGCGCGGCTCTGCTGTGCGCTATTCA 30731 Query 10414 CGGAGTCACTGTAGAAAACACACTTTATCAAGATGGCGAACAAGCAAACACTTTCAAAGC 10473 || | ||||| ||||| || | | | |||| || || ||||| || ||| || Sbjct 30730 TGGTGCTACTGTCGAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTCCGCGC 30671 Query 10474 TTTTGATAGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTC 10533 |||| | ||||||| ||||| || ||||| ||||| || || ||||| || ||||| Sbjct 30670 TTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCCAACCGCTTTTGGTC 30611 Query 10534 CCAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTGT 10593 ||| || ||||| |||||||| ||||||||| ||| | |||||||||||| | ||||| Sbjct 30610 CCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 30551 Query 10594 ACCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATCTTCG 10653 ||| || | ||| | |||| || ||||| | | ||||| ||||| || || || Sbjct 30550 ACCAGTAACTGGTTTATGGATGAGCGCTCTTGGAGTAGTAGGTCTGGCTCTGAACCTGCG 30491 Query 10654 TGCTTACGATTTTGTATCTCAAGAGATCAGGGCGTCAGAAGATCCTGAATTTGAGACGTT 10713 ||| || || || || ||||| || ||| | || | |||||||||||||||||||| || Sbjct 30490 TGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTT 30431 Query 10714 CTATACGAAGAATATCCTTCTGAACGAAGGTCTTCGTGCATGGATGGCACCAGTTGACCA 10773 |||||| || ||||| ||| | || ||||| ||||||| |||||||| | || || Sbjct 30430 CTATACCAAAAATATTCTTTTAAATGAAGGCATTCGTGCTTGGATGGCGGCTCAAGATCA 30371 Query 10774 ACCACACGAAAGCTTTGTTTTCCCAGAAGAAGTTCTTCC 10812 || || |||| | || | ||||| || || ||||| || Sbjct 30370 GCCTCATGAAAACCTTATATTCCCCGAGGAGGTTCTACC 30332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514969218528000