Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_020486.1 Length=171211 Score E Sequences producing significant alignments: (Bits) Value seq98 679 0.0 seq28 524 8e-144 seq153503 96.9 4e-15 seq24621 84.2 2e-11 >seq98 Length=41871 Score = 679 bits (752), Expect = 0.0 Identities = 750/994 (75%), Gaps = 4/994 (0%) Strand=Plus/Minus Query 160876 TTTTGTAACTGGGTCACCAGCACCGACAACCGCCTTTATGTTGGTTGGTTCGGCGTCCTG 160935 || ||||||||| | ||||||||||| ||||| ||||| |||| ||||| || || || Sbjct 41566 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 41507 Query 160936 ATGATTCCCTGCTTGCTCG-CTGCTACCATTTGT-TTCATCATTGCCTTCGTTGGTGCTC 160993 ||||| |||| ||| | | | || || | ||| || || || || ||| ||| ||| | Sbjct 41506 ATGAT-CCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCC 41449 Query 160994 CCCCTGTGGACATCGACGGCATTCGTGAACCCGTCGCTGGTTCGCTCATGTATGGAAACA 161053 | || || || || || || |||||||||||||| |||| || | | || ||||||| Sbjct 41448 CTCCAGTAGATATTGATGGTATTCGTGAACCCGTTTCTGGATCTTTACTTTACGGAAACA 41389 Query 161054 ACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCA 161113 | || || |||||||| |||| ||| ||||| |||||| ||| ||||||| ||||| | Sbjct 41388 ATATTATTTCTGGTGCCATTATTCCTACTTCTGCCGCTATAGGTTTGCACTTTTACCCAA 41329 Query 161114 TCTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTG 161173 | |||||||| ||| | || |||||| | |||||||| ||||||| |||| ||| Sbjct 41328 TATGGGAAGCTGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTG 41269 Query 161174 TGTTCCACTTCCTGATTGGCATCTATGCTTACATGGGTCGTGAGTGGGAACTTTCTTACC 161233 | | |||||| | |||| | | ||||||||| ||||||||||||||| || || Sbjct 41268 TTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGCCGTGAGTGGGAACTTAGTTTCC 41209 Query 161234 GTCTGGGAATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGAGTG 161293 || |||| ||||| ||||||||| || ||||| || |||||||| || ||||| | | Sbjct 41208 GTTTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCTACCG 41149 Query 161294 CAGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGCA 161353 | || ||| || | || || | |||||||| || || || | |||||| | || | Sbjct 41148 CTGTCTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCGGACGGTATGCCTTTAGGAA 41089 Query 161354 TCTCTGGTACGTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTCATGCACC 161413 |||||||||| ||||||| ||| |||| ||||| || ||||||||||| || ||||||| Sbjct 41088 TCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACC 41029 Query 161414 CCTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACG 161473 | || |||||| | |||||||| ||||| || ||||| || || |||||||| ||||| | Sbjct 41028 CATTTCATATGTTAGGCGTAGCGGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATG 40969 Query 161474 GTTCGCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAAACGAGTCCCAGAACTATG 161533 |||| |||| ||||| || | | ||||| || ||||| || || || | | Sbjct 40968 GTTCCTTGGTAACCTCAAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAG 40909 Query 161534 GTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCCCACGGGTACTTCG 161593 ||||||| || |||||||||| || || || || ||||| || || || || || || | Sbjct 40908 GTTACAAATTTGGTCAAGAAGGGGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTG 40849 Query 161594 GTCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGCTCGCTGCACTTCTTCCTTG 161653 | || |||| |||||||| ||| ||||||||||| || || | ||||||||||| | Sbjct 40848 GCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCATTACACTTCTTCCTAG 40789 Query 161654 CTGCTTGGCCTGTTGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCA 161713 ||||||||||||| | || ||||||||||| || | || | ||||| ||||| |||| Sbjct 40788 CTGCTTGGCCTGTAATAGGTATCTGGTTCACCGCTTTAGGTATTAGCACTATGGCTTTCA 40729 Query 161714 ACCTGAATGGTTTCAACTTCAACCAGTCTATCGTTGATAGTCAGGGTAAAGTTATCAACA 161773 || | ||||||||||| |||||||| || | ||||||||||| ||| || || || | Sbjct 40728 ACTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAATA 40669 Query 161774 CCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGCAATG 161833 | ||||| || || ||||||||||| ||||| |||||||| ||||| || || |||| Sbjct 40668 CTTGGGCTGATATTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 40609 Query 161834 CTCACAACTTCCCTCTTGACCTTGCTGCTGCTGA 161867 |||||||||||||||| ||||| ||||||| ||| Sbjct 40608 CTCACAACTTCCCTCTAGACCTAGCTGCTGTTGA 40575 Score = 91.5 bits (100), Expect = 2e-13 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 157691 GGGGTGTAGCGCAGCTTGGTAGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGTTCGAAT 157750 ||| |||||||||||||||||||||| ||| |||||| ||| | ||||||||||| ||| Sbjct 10392 GGGATGTAGCGCAGCTTGGTAGCGCGTTTGTTTTGGGTACAAAATGTCGCAGGTTCAAAT 10333 Query 157751 CCTGTCACCCCGACTTAT 157768 ||||||| ||| || ||| Sbjct 10332 CCTGTCATCCCTACCTAT 10315 >seq28 Length=37419 Score = 524 bits (580), Expect = 8e-144 Identities = 730/1018 (72%), Gaps = 10/1018 (1%) Strand=Plus/Minus Query 162117 TTTGATGTCCTTGACGACTGGCTTAAAAGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGA 162176 |||||| | | || |||||| | || |||||||| ||||| || || ||||| || Sbjct 31329 TTTGATATTATGGATGACTGGTTGCGGAGGGACCGTTTTGTTTTCGTAGGTTGGTCCGGT 31270 Query 162177 CTTCTTCTTTTTCCCACTGCTTATCTTGCTCTTGGGGGTTGGCTTACTGGGACTACTTTC 162236 || | || ||||| ||| || ||||| | ||||||||| | || || || ||||| Sbjct 31269 CTATTGCTCTTTCCTTGTGCCTACTTTGCTTTAGGGGGTTGGTTCACAGGTACAACTTTT 31210 Query 162237 GTCACGAGTTGGTATACTCACGGACTTGCGAGTTCCTATCTTGAGGG-TGCAAACTTTCT 162295 || || |||||||| || ||| | || || |||||| | || || ||||| ||| | Sbjct 31209 GTAACCTCCTGGTATACCCATGGATTGGCCAGCTCCTATTTGGAAGGCTGCAA-CTTCTT 31151 Query 162296 TACTGCGGCAGTTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCTATGGGG 162355 || || ||||||||||| || || | | | | |||||| | || | |||||||| Sbjct 31150 AACCGCTGCAGTTTCTACCCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGG 31091 Query 162356 TCCTGAGTCTCAAGGGGACTTCATCCGCTGGTGCCAACTTGGGGGACTCTGGACTTTTGT 162415 |||||| | |||||||| || | || ||||| ||| | || || || ||||||||||| Sbjct 31090 TCCTGAAGCGCAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGT 31031 Query 162416 GGCGCTCCACGGAGCCTTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACTGGCACG 162475 || ||||||||||| || | ||| |||||||| ||| | || || |||||| | || || Sbjct 31030 TGCTCTCCACGGAGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAAATTGCTCG 30971 Query 162476 ACTTATCGGT---ATT-CGTCCTTACAATGCTATTGCTTTCTCAGGTCCTATTGCTGTAT 162531 | || || ||| || ||||| ||||| || || || || ||||| |||||||| | Sbjct 30970 A----TCCGTGCAATTGCGACCTTATAATGCAATCGCATTTTCTGGTCCAATTGCTGTTT 30915 Query 162532 TCGTTAGTGTTTTTCTTATCTATCCTTTGGGACAATCGTCCTGGTTCTTCGCACCGTCGT 162591 | ||| ||| || || || ||||| | || ||||| |||||||| ||||| | Sbjct 30914 TTGTTTCTGTATTCCTGATTTATCCGCTAGGTCAATCCGGTTGGTTCTTTGCACCTAGTT 30855 Query 162592 TCGGGGTCGCAGCAATCTTCCGATTCCTGCTCTTCCTCCAAGGGTTCCATAACTGGACGC 162651 | || || ||||| || || |||||| | || || |||||||||| ||||| ||||| | Sbjct 30854 TTGGTGTAGCAGCTATATTTCGATTCATCCTGTTTTTCCAAGGGTTTCATAATTGGACAC 30795 Query 162652 TAAATCCTTTTCACATGATGGGCGTAGCAGGTATCCTTGGTGGTGCATTGCTCTCTGCTA 162711 | || || ||||| |||||||| || || ||| | | || | || |||| | |||| Sbjct 30794 TGAACCCGTTTCATATGATGGGAGTTGCTGGTGTATTGGGCGCGGCTCTGCTGTGCGCTA 30735 Query 162712 TTCATGGAGTGACAGTTGAAAATACACTGTACGAAGATGGCGAACAAGCAAACACTTTTA 162771 ||||||| | || || |||||||| | | ||||| || || ||||| || || Sbjct 30734 TTCATGGTGCTACTGTCGAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTCC 30675 Query 162772 AAGCATTTGACTCCACACAGGAGGAAGAAACGTATTCGATGGTTACTGCGAACCGCTTCT 162831 || ||| || | || || | |||||||| ||||| ||||| || || |||||||| | Sbjct 30674 GCGCTTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCCAACCGCTTTT 30615 Query 162832 GGTCACAGATTTTCGGTATTGCTTTTAGTAACAAGCGTTGGTTGCATTTCTTTATGCTCT 162891 |||| || || || || |||||||| || || |||||||| |||||||||||| | | Sbjct 30614 GGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTAT 30555 Query 162892 TTGTTCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATTGGACTCGCTCTCAATC 162951 |||| || || | ||| | |||| || || | || | | || || ||||| || | Sbjct 30554 TTGTACCAGTAACTGGTTTATGGATGAGCGCTCTTGGAGTAGTAGGTCTGGCTCTGAACC 30495 Query 162952 TTCGTGCTTACGACTTTGTATCTCAAGAAGTTCGTGCGGCAGAAGACCCTGAGTTTGAGA 163011 | ||||| || ||||| || ||||| ||| | ||||| || ||||| ||||| ||||||| Sbjct 30494 TGCGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGA 30435 Query 163012 CGTTCTATACAAAGAACATTCTTCTGAATGAAGGACTTCGAGCATGGTTAGCACCAGTGG 163071 | |||||||| || || |||||| | |||||||| |||| || ||| | || | | Sbjct 30434 CTTTCTATACCAAAAATATTCTTTTAAATGAAGGCATTCGTGCTTGGATGGCGGCTCAAG 30375 Query 163072 ACCAACCTCATGAGAACTTTGTGTTCCCTGAAGAGGTCTTGCCAAGAGGCAACGCTCT 163129 | || |||||||| ||| || | ||||| || ||||| | || | || |||||||| Sbjct 30374 ATCAGCCTCATGAAAACCTTATATTCCCCGAGGAGGTTCTACCCCGTGGAAACGCTCT 30317 >seq153503 Length=945 Score = 96.9 bits (106), Expect = 4e-15 Identities = 155/221 (70%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 158340 GTACATCCTTGACGCAGCTGAGGAAGCGGGTGTCGAACTCAATTACTCGTGCCGTGCAGG 158399 |||||| |||||||||||||||||| | ||| |||| ||| ||||| ||| | || || Sbjct 784 GTACATTCTTGACGCAGCTGAGGAAACCGGTATCGACCTCCCATACTCATGCAGGGCTGG 725 Query 158400 CGCTTGTTCGTCGTGTGCGGGAAAACTCGTCTCTGGCACCGTAGACCAAAGCGA--CCAG 158457 |||| || || ||||| || || | || || || | || || || || ||| Sbjct 724 TTCTTGCTCTTCATGTGCTGGTAAGGTTGTGTCAGGATCTGTGGATCAGTCTGATGGCAG 665 Query 158458 TCCTTCCTGGACGATGACCAAATCGATTCTGGTTTCATTCTGACTTGTGTTTCTTATCCT 158517 || ||| ||||||||||| || || || | | || ||||||||| ||| |||| Sbjct 664 --CTACCTTGACGATGACCAGATGGACGAGGGGTGGGTGCTCACTTGTGTTGCTTTTCCT 607 Query 158518 ACAAGTGATTGTGTGATTGAGACTGACAAGGAAGAGGAACT 158558 ||||| ||| |||||||| |||| || |||| ||| Sbjct 606 CAGGGTGATGTTGTCATTGAGACACACAAAGAGGAGGCACT 566 >seq24621 Length=2300 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/234 (68%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 158332 GACGACCAGTACATCCTTGACGCAGCTGAGGAAGCGGGTGTCGAACTCAATTACTCGTGC 158391 || ||| ||||||||| || ||||| ||||| || || || || || || || ||| Sbjct 2248 GATGACTCGTACATCCTGGATGCAGCCGAGGATGCTGGAGTTGAGCTGCCATATTCCTGC 2189 Query 158392 CGTGCAGGCGCTTGTTCGTCGTGTGCGGGAAAACTCGTCTCTGGCACCGTAGACCAAAGC 158451 | || || || || || | ||||| || || | | || ||||| || ||||| | Sbjct 2188 AGGGCCGGGGCATGCTCTACCTGTGCTGGGAAGATTGCGTCGGGCACAGTCGACCAGTCC 2129 Query 158452 GACCAGTCCTTCCTGGACGATGACCAAATCGATTCTGGTTTCATTCTGACTTGTGTTTCT 158511 || |||||||| || || | ||| | || |||| | | ||||| || ||||| Sbjct 2128 GATGGTTCCTTCCTCGATGAGAATCAAGTGAATCAGGGTTACTTGCTGACCTGCGTTTCA 2069 Query 158512 TATCCTACAAGTGATTGTGTGATTGAGACTGACAAGGAAGAGGAACTGTATTGA 158565 || || || ||||||||||| | ||| |||||||| ||||| || ||| Sbjct 2068 TACCCAACTTCAGATTGTGTGATCCACACTCACAAGGAAACTGAACTTTACTGA 2015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546144957277920