Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_020835.1 Length=47325 Score E Sequences producing significant alignments: (Bits) Value seq98 536 4e-148 >seq98 Length=41871 Score = 536 bits (594), Expect = 4e-148 Identities = 714/989 (72%), Gaps = 6/989 (1%) Strand=Plus/Plus Query 17834 AGCTAAATCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCAAGGTT 17893 ||||| ||||| |||||||| ||||||||||| || ||||||||||| | |||||||| Sbjct 40583 AGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAACTTCCATACCAAGGTT 40642 Query 17894 AGCTCTGTTGAGTACGTCAGCCCATGTAGGTACGACTTGTCCTCCAGCTGCTACAATGGA 17953 ||| | ||||| | |||||||| ||| | || | ||| | | || | ||| Sbjct 40643 AGCACGGTTGATAATATCAGCCCAAGTATTAATTACACGACCTTGACTATCAACTACGGA 40702 Query 17954 TTGGTTGAAGTTGAATCCATTGAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTAAG 18013 ||||||||| ||||| ||||| | || |||||||||||| || || | || ||| | Sbjct 40703 TTGGTTGAAATTGAAACCATTTAAGTTGAAAGCCATAGTGCTAATACCTAAAGCGGTGAA 40762 Query 18014 CCATATGCAAGTGACGGGCCAAGCAGCCAAGAAGAAATGTAGACTCCTGCTATTGTTAAA 18073 ||| || | | || ||||||||||| | |||||| |||| | ||||| || Sbjct 40763 CCAGATACCTATTACAGGCCAAGCAGCTAGGAAGAAGTGTAATGAACGAGAGTTGTTGAA 40822 Query 18074 GCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATATTATACGT 18133 |||||||| |||||||| | || ||||| || |||||||| || || |||||||| || Sbjct 40823 ACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATATTATAAGT 40882 Query 18134 CTCTTCTTCTTGGCCAAATTTATATCCATAGTTCTGAGACTCAAGCTCAGTCGTTTCTCT 18193 || ||||||| |||||||| || || | || ||| ||| || || ||||| || Sbjct 40883 TTCCCCTTCTTGACCAAATTTGTAACCTTCATTAGCAGATTCATTTTCTGTAGTTTCCCT 40942 Query 18194 AATAAG---TGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAA 18250 || | ||||| || |||| || ||||||||| ||||| | || ||||| Sbjct 40943 GATCAAACTTGAGGT--TACCAAGGAA-CCATGCATAGCACTGAATAGGGAGCCGCCGAA 40999 Query 18251 TACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCGGCTTGGAA 18310 ||| || || || || | |||||| || || ||||||||||| ||||| || || ||||| Sbjct 41000 TACACCCGCTACGCCTAACATATGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAA 41059 Query 18311 TACGAACATGAAATTGAAAGTACCGCTAATACCAAGAGGCATACCATCAGAGAAACTCCC 18370 ||| | ||| || ||||||||||| || || | ||||||||| || || || || || Sbjct 41060 TACAATCATAAAGTTGAAAGTACCAGAGATTCCTAAAGGCATACCGTCCGAAAAGCTTCC 41119 Query 18371 TTGTCCAAAAGGATAAACGAGAAATACTGAGAAGGCAGCTGCTACTGGTGCGGAATAAGC 18430 ||| |||| || |||| | || || | | || ||||| || || || ||||| || Sbjct 41120 TTGACCAATTGGGTAAATCAAGAAGACAGCGGTAGCTGCTGCAACAGGAGCTGAATATGC 41179 Query 18431 AACACAAATCCACGGGCGCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCATGTA 18490 |||| |||||| ||||||||||| | | ||||||||||||| | || |||||||| Sbjct 41180 AACAGCAATCCAAGGGCGCATACCCAAACGGAAACTAAGTTCCCACTCACGGCCCATGTA 41239 Query 18491 AGCTGCGATGCCGATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATATAA 18550 | || | || | | ||||| | ||||| |||| ||| || || ||||| ||||| Sbjct 41240 ACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTTGTATAA 41299 Query 18551 CCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGA 18610 ||| || || | || |||||||||||| |||||||| ||||| | ||| || ||| ||| Sbjct 41300 CCATTCATCAACGGATGCAGCTTCCCATATTGGGTAAAAGTGCAAACCTATAGCGGCAGA 41359 Query 18611 TGACGGGACGATTGCCCCTGATATGATGTTGTTTCCATAGAGTAAGGCTCCTGAGACAGG 18670 | || | || || || || || || |||||||| || ||||| | ||| || || || Sbjct 41360 AGTAGGAATAATGGCACCAGAAATAATATTGTTTCCGTAAAGTAAAGATCCAGAAACGGG 41419 Query 18671 CTCACGAATACCATCTATGTCAACGGGAGGAGCAGCAACAAATGCAATCAAAAATGCTGT 18730 |||||||||||||| || || || ||||| ||||||| || || || | |||| | | Sbjct 41420 TTCACGAATACCATCAATATCTACTGGAGGGGCAGCAATGAAAGCGATAATAAATACAGA 41479 Query 18731 AGCTGCGGTTAAAAGTGCAGGGATCATAAGTACCCCAAACCACCCCACGTAGAGGCGGTT 18790 || |||||| || | | ||||||||| | || |||||||| || | ||| || ||||| Sbjct 41480 AGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTT 41539 Query 18791 GTTTGTACTCGTAACCCAGTCACATAAAC 18819 | || || || | ||||| ||| |||| Sbjct 41540 TTCGGTGCTGGTTATCCAGTTACAGAAAC 41568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150897902433128