Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_020837.1 Length=198013 Score E Sequences producing significant alignments: (Bits) Value seq98 556 2e-153 seq28 518 4e-142 seq24621 114 2e-20 >seq98 Length=41871 Score = 556 bits (616), Expect = 2e-153 Identities = 701/965 (73%), Gaps = 8/965 (1%) Strand=Plus/Plus Query 103170 CAGCAGCAAGGTCAAGGGGGAAGTTGTGAGCGTTACGCTCGTGCATGACTTCCATACCCA 103229 ||||||| ||||| || |||||||||||||| ||||| || ||||| ||||||||||| | Sbjct 40579 CAGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAACTTCCATACCAA 40638 Query 103230 GACCAGCGCGGTTGAGAACGTCTGCCCAGGTGTTCAACACACGACCCTGACCATCAAGGA 103289 | ||| ||||||| || || ||||| || || | |||||||| |||| ||||| | Sbjct 40639 GGTTAGCACGGTTGATAATATCAGCCCAAGTATTAATTACACGACCTTGACTATCAACTA 40698 Query 103290 TGGACTGGTTGAAGTTGAATCCGTTCAGGTTGAACGCCATGGTGCTAACACCAAGTGCGG 103349 ||| |||||||| ||||| || || | |||||| ||||| ||||||| ||| | |||| Sbjct 40699 CGGATTGGTTGAAATTGAAACCATTTAAGTTGAAAGCCATAGTGCTAATACCTAAAGCGG 40758 Query 103350 TGAACCAGATACCCACTACTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAGTTGT 103409 ||||||||||||| | ||| || | ||||||| Sbjct 40759 TGAACCAGATACCTATTACAGGCCAAGCAGCTAGGAAGAAGTGTAATGAACGAGAGTTGT 40818 Query 103410 TGAATGATGCGTATTGGAAGATCAAACGACCGAAGTAACCATGAGCGGCTACGATGTTGT 103469 |||| || |||||||||||||| || || || |||||||||||||||||||| || | Sbjct 40819 TGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATATTAT 40878 Query 103470 ATGTCTCTTCCTCTTGTCCGAACTTGTAACCATAGTTTTGAGATTCAGTTTCAGTCGTCT 103529 | || || | ||||| || || |||||||| | || ||||||| |||| || || | Sbjct 40879 AAGTTTCCCCTTCTTGACCAAATTTGTAACCTTCATTAGCAGATTCATTTTCTGTAGTTT 40938 Query 103530 CAC-GAACCAGC--GAGGACGTAACAAGCGAACCGTGCATAGCACTGAACAGTGAACCAC 103586 | | || | | | |||| || |||| ||||| |||||||||||||| || || || | Sbjct 40939 CCCTGATCAAACTTGAGG--TTACCAAG-GAACCATGCATAGCACTGAATAGGGAGCCGC 40995 Query 103587 CGAAGACTCCAGCAACGCCCAGCATGTGGAAGGGGTGCATGAGAATGTTATGTTCGGCTT 103646 |||| || || || ||||| | ||| || || |||||||| || ||||| || || || | Sbjct 40996 CGAATACACCCGCTACGCCTAACATATGAAATGGGTGCATAAGGATGTTGTGCTCAGCCT 41055 Query 103647 GGAAGACCAGCATGTAGTTGAAGGTTCCCGAAATACCCAAAGGCATAGCATCGGAGAACG 103706 |||| || | ||| ||||||| || || || || || ||||||||| | || || || Sbjct 41056 GGAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAAAGGCATACCGTCCGAAAAGC 41115 Query 103707 AACCTTGACCAAAGGGGTAGACCAAGAATACTGCGGACGCAGCCGCAACAGGAGCAGAGT 103766 |||||||||| ||||| | |||||| || |||| || || ||||||||||| || | Sbjct 41116 TTCCTTGACCAATTGGGTAAATCAAGAAGACAGCGGTAGCTGCTGCAACAGGAGCTGAAT 41175 Query 103767 ATGCGACACAGATCCAGGGGCGCATGCCCAGACGGTAGGACAATTCCCACTCACGTCCCA 103826 |||| ||| ||||| |||||||| |||| |||| | | |||||||||||| |||| Sbjct 41176 ATGCAACAGCAATCCAAGGGCGCATACCCAAACGGAAACTAAGTTCCCACTCACGGCCCA 41235 Query 103827 TATATGCATAGATGCCAATGAGGAAGTGGAATACTACAAGTTGGAAAGGACCACCGTTAT 103886 | || | | |||| | |||||| | || | |||| ||||||| ||||| | Sbjct 41236 TGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTTGT 41295 Query 103887 ACAGCCACTCATCAAGAGATGCTGCTTCCCAAATGGGATAGAAGTGAAGACCAATTGCGT 103946 | | ||| ||||||| ||||| |||||||| || || || ||||| | ||| || ||| Sbjct 41296 ATAACCATTCATCAACGGATGCAGCTTCCCATATTGGGTAAAAGTGCAAACCTATAGCGG 41355 Query 103947 TGGAGGAGGGAACAACTGCACCAGAGATGATGTTGTTACCGTACATGAGTGAACCAGCGA 104006 || | |||| || |||||||| || || ||||| ||||| | | || |||| | Sbjct 41356 CAGAAGTAGGAATAATGGCACCAGAAATAATATTGTTTCCGTAAAGTAAAGATCCAGAAA 41415 Query 104007 CGGGTTCACGAATGCCGTCGATATCGACGGGAGGTGCTGCTACGAAAGCAACGATGAA-G 104065 ||||||||||||| || || ||||| || ||||| || || | |||||| | || || Sbjct 41416 CGGGTTCACGAATACCATCAATATCTACTGGAGGGGCAGCAATGAAAGCGATAATAAATA 41475 Query 104066 CAGATGGTTGCCGCCAACAGAGTTGGGATCATCAGCACACCGAACCAACCAACATAGAGA 104125 |||| ||||| | ||| | ||| |||||||||| ||||| ||||| |||| || ||| Sbjct 41476 CAGA-AGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGA 41534 Query 104126 CGGTT 104130 ||||| Sbjct 41535 CGGTT 41539 >seq28 Length=37419 Score = 518 bits (574), Expect = 4e-142 Identities = 730/1019 (72%), Gaps = 12/1019 (1%) Strand=Plus/Plus Query 101710 AGAGCGTTGCCTCTTGGCAATACCTCTTCAGGAAATACAAAGTTTTCATGCGGTTGATCG 101769 |||||||| || | || | ||||| || || |||| || ||||||||| || ||||| Sbjct 30317 AGAGCGTTTCCACGGGGTAGAACCTCCTCGGGGAATATAAGGTTTTCATGAGGCTGATCT 30376 Query 101770 ACTGGTGCCAACCATGCACGTAGACCTTCATTCAATAGGATGTTCTTTGTGTAGAACGTC 101829 | |||| ||| ||||| | |||||||| || || || || || || ||||| ||| Sbjct 30377 TGAGCCGCCATCCAAGCACGAATGCCTTCATTTAAAAGAATATTTTTGGTATAGAAAGTC 30436 Query 101830 TCGAACTCTGGATCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCACGAAGG 101889 || || || |||||||| ||||| | ||| || || || || |||||||| ||||| ||| Sbjct 30437 TCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGAGAAACGAAGTCATAGGCACGCAGG 30496 Query 101890 TTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCACAGACCCATAACAGGAACAAAG 101949 || ||||| ||||| | | || | | || |||| | ||| | || || ||||| Sbjct 30497 TTCAGAGCCAGACCTACTACTCCAAGAGCGCTCATCCATAAACCAGTTACTGGTACAAAT 30556 Query 101950 AGCATAAAGAAATGCAACCACCTCTTATTACTAAATGCAATACCAAAGATTTGAGACCAG 102009 | |||||||||||| ||||| | ||||| ||| |||| ||||||||||| ||||| Sbjct 30557 AACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGGGACCAA 30616 Query 102010 AAACGGTTTGCTGTAACCATTGAATAAGTCTCTTCCTCTTGTGTGGAATCGAATGCTTTG 102069 || ||||| || || |||||||||||||| ||||| |||| || | | || || | Sbjct 30617 AAGCGGTTGGCGGTGACCATTGAATAAGTTTCTTCGGCTTGAGTTGGGTTAAAAGCGCGG 30676 Query 102070 AAAGTGTTTGCTTGATCACCATCTTCATACAGAGTGTTCTCCACAGTGACACCGTGGATT 102129 || || ||||| |||||| |||||| | | ||| || || ||||| |||| || || Sbjct 30677 AATGTATTTGCACCATCACCGTCTTCAAATAAAGTATTTTCGACAGTAGCACCATGAATA 30736 Query 102130 GCTGACAGCAGTGCTCCTCCCAGGATACCTGCAACACCCATCATATGGAATGGGTTGAGC 102189 || ||||||| || | |||| | ||| ||||| ||||||||||| || ||||| || Sbjct 30737 GCGCACAGCAGAGCCGCGCCCAATACACCAGCAACTCCCATCATATGAAACGGGTTCAGT 30796 Query 102190 GTCCAGTTATGGAAGCCCTGTAGGAAGAGTAGGAATCTAAATATCGCTGCAACACCAAAC 102249 ||||| ||||| || || || | || || | ||||| |||||| ||||| |||||||| Sbjct 30797 GTCCAATTATGAAACCCTTGGAAAAACAGGATGAATCGAAATATAGCTGCTACACCAAAA 30856 Query 102250 GAGGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATAGATGAGAAACACACTGACAAAA 102309 || ||||||||||||| ||| || || || ||||| || || || ||| |||||| Sbjct 30857 CTAGGTGCAAAGAACCAACCGGATTGACCTAGCGGATAAATCAGGAATACAGAAACAAAA 30916 Query 102310 ACAGCGATAGGCCCAGAGAACGCAATAGCATTGTACGGACG-AATTCCAATTAACCTAGC 102368 ||||| || || ||||| || || || ||||| || || || |||| | | | | ||| Sbjct 30917 ACAGCAATTGGACCAGAAAATGCGATTGCATTATAAGGTCGCAATTGC-ACGGATCGAGC 30975 Query 102369 CAACTCGAATTGACGAAGCATGAAACCAATGAGGGCAAATGCACCGTGGAGAGCCACAAA 102428 | || |||||||| | ||| ||||| || || | || || ||||||||||| ||||| Sbjct 30976 AATTTCAAATTGACGTAACATAAAACCTATTAGTCCGAAAGCTCCGTGGAGAGCAACAAA 31035 Query 102429 AGCCCAGAGTCCCCCAAGTTGGACCCACCTGACGAAATCTCCTTGAGCTTCAGGACCCCA 102488 || ||| || || || | ||| ||| | ||||| ||||| |||||||||||||| Sbjct 31036 AGTCCACAGACCACCTAATTGACACCAACGAGTAAAATCCCCTTGCGCTTCAGGACCCCA 31095 Query 102489 AAGTAGAAGAAGAGAATGACCCATAGAGTCAGCAGGCGTTGACACAGCAGCTGTAAGGAA 102548 |||| | | |||||| | | | | |||||| || || || ||||| || | ||| Sbjct 31096 TAGTAACAACAAAGAATGTGCTAAACTATTAGCAGGGGTAGAAACTGCAGCGGTTAAGAA 31155 Query 102549 ATTAGCA-CCTTCAAGGTAACTAGACGCAAGC----CCGTGGGTATACCAGGAAGTAGCA 102603 || ||| ||||| || ||| || || || |||||||||||||| || || Sbjct 31156 GTT-GCAGCCTTC----CAAATAGGAGCTGGCCAATCCATGGGTATACCAGGAGGTTACA 31210 Query 102604 AACGTCGTGCCAGTAAGCCAGCCCCCAATTGCGAGATAAGCAGTGGGAAAAAGAAGTAGT 102663 || || || || || | ||| ||||| | || | || ||| ||||| || | ||| Sbjct 31211 AAAGTTGTACCTGTGAACCAACCCCCTAAAGCAAAGTAGGCACAAGGAAAGAGCAATAGA 31270 Query 102664 CCAGACCAACCCACAAAGACAAAGCGATCTCGTTTAATCCAGTCATCCAGGATGTCAAA 102722 || |||||||| || || ||||| || || | | ||||||||||| || ||||| Sbjct 31271 CCGGACCAACCTACGAAAACAAAACGGTCCCTCCGCAACCAGTCATCCATAATATCAAA 31329 >seq24621 Length=2300 Score = 114 bits (126), Expect = 2e-20 Identities = 139/187 (74%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 102814 ATCCGAAGTTGGGTATGCCACGCAGGTCAG-AACAAAACCTGCTTCTAGTTGATCGTCAT 102872 ||| ||||||||||||| ||||||||||| || || |||| ||| | ||||| |||| Sbjct 2054 ATCTGAAGTTGGGTATGAAACGCAGGTCAGCAAGTAACCCTGATTC-ACTTGATTCTCAT 2112 Query 102873 CCAGAAAGGATTGATCTTCTTGATCTACAGTACCCGATTCAATCTTACCAGCACAAGTAG 102932 | || ||||| ||| || || || || ||||| ||||||| |||||||| |||| Sbjct 2113 CGAGGAAGGAACCATCGGACTGGTCGACTGTGCCCGACGCAATCTTCCCAGCACAGGTAG 2172 Query 102933 AACACGCACCAGCACGACAGGAATAAGGCAGATCAACACCTGCTTCATCAGCAGCGTCTA 102992 | || || || || | |||||||| ||||| ||||| || || || || || || || | Sbjct 2173 AGCATGCCCCGGCCCTGCAGGAATATGGCAGCTCAACTCCAGCATCCTCGGCTGCATCCA 2232 Query 102993 GAATATA 102999 | || || Sbjct 2233 GGATGTA 2239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 631660477692960