Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_020838.1 Length=45728 Score E Sequences producing significant alignments: (Bits) Value seq98 479 8e-131 >seq98 Length=41871 Score = 479 bits (530), Expect = 8e-131 Identities = 682/957 (71%), Gaps = 2/957 (0%) Strand=Plus/Plus Query 21471 GCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGTTG 21530 || ||||| || ||||||||||| || || || |||||||| || || | |||||||| Sbjct 40584 GCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 40643 Query 21531 GCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCTAGCAGAGAT 21590 |||||||| | ||| |||||||| || || || || | || | | | | | | ||| Sbjct 40644 GCACGGTTGATAATATCAGCCCAAGTATTAATTACACGACCTTGACTATCAACTACGGAT 40703 Query 21591 TGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAAGCGCAGCAAAC 21650 ||||| || ||||||||||| |||||||||||||| || | || | || | ||| Sbjct 40704 TGGTTGAAATTGAAACCATTTAAGTTGAAAGCCATAGTGCTAATACCTAAAGCGGTGAAC 40763 Query 21651 CAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTAAAG 21710 || ||||||| |||||||| ||||| || ||||| || | ||| || || || || Sbjct 40764 CAGATACCTATTACAGGCCAAGCAGCTAGGAAGAAGTGTAATGAACGAGAGTTGTTGAAA 40823 Query 21711 CTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATATTGTAAGTC 21770 ||||||||||||||||| | || |||||||| || ||||| || || ||||| ||||| Sbjct 40824 CTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATATTATAAGTT 40883 Query 21771 TCTTCCTCTTGACCAAACTTGTAACCATAGTTCTGTGAAACCTCTTCAGTCGTCTCACGA 21830 || | ||||||||||| |||||||| | || || | | ||| || || || | Sbjct 40884 TCCCCTTCTTGACCAAATTTGTAACCTTCATTAGCAGATTCATTTTCTGTAGTTTCCCTG 40943 Query 21831 ATGAGTGACGACGTGACCAGGCTACCGTGCATAGCAGAGAACAAACTCCCACCAAATACG 21890 || | || || |||| | ||| ||||||||| ||| | || || ||||| Sbjct 40944 ATCAAACTTGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATACA 41003 Query 21891 CCGGCCACACCCAGCATGTGAAAAGGATGCATAAGAATATTGTGCTCAGCCTGGAACACC 21950 || || || || | ||| ||||| || |||||||| || ||||||||||||||||| || Sbjct 41004 CCCGCTACGCCTAACATATGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACA 41063 Query 21951 AGCATGTAGTTGAAGGTGCCGGATATCCCCAAGGGCATAGCATCAGAAAAAGAGCCCTGT 22010 | ||| ||||||| || || || || || || |||||| | || ||||| || || Sbjct 41064 ATCATAAAGTTGAAAGTACCAGAGATTCCTAAAGGCATACCGTCCGAAAAGCTTCCTTGA 41123 Query 22011 CCAAACGGATAAACAAGGAACACAGCAGTCGCAGCGGCGACAGGAGCAGAGTACGCAACA 22070 |||| || |||| | ||| ||||| || || || || |||||||| || || |||||| Sbjct 41124 CCAATTGGGTAAATCAAGAAGACAGCGGTAGCTGCTGCAACAGGAGCTGAATATGCAACA 41183 Query 22071 AAGATCCAGGGCCTCATCCCTAGTCGATAGCTAAGTTCCCACTCTCGTCCCATGTAAGCA 22130 ||||| || | ||| || | || | |||||||||||||| || ||||||||| | Sbjct 41184 GCAATCCAAGGGCGCATACCCAAACGGAAACTAAGTTCCCACTCACGGCCCATGTAACAA 41243 Query 22131 AAGACGCCAATGAGGAAGTGGAATACGGTGAGTTGGAATGGACCGCCGTTGTACAGCCAT 22190 || |||| | |||||| | || | |||| | |||||||||||||| | |||| Sbjct 41244 GCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTTGTATAACCAT 41303 Query 22191 TCATCAAGTGTAGCAGCTTCCCAAATTGGGTAGAAGTGTAGTCCGATGGCATTACTGCTC 22250 ||||||| | ||||||||||| |||||||| ||||| | || || || | | Sbjct 41304 TCATCAACGGATGCAGCTTCCCATATTGGGTAAAAGTGCAAACCTATAGCGGCAGAAGTA 41363 Query 22251 GGAACGACGGCTCCTGATATGATGTTGTTACCATACAACAGGGAGCCAGCGACGGGTTCT 22310 |||| | ||| || || || || ||||| || || | | || |||| |||||||| Sbjct 41364 GGAATAATGGCACCAGAAATAATATTGTTTCCGTAAAGTAAAGATCCAGAAACGGGTTCA 41423 Query 22311 CGGATTCCATCGATGTCAACAGGTGGTGCGCCAACAAAGGCGATAATAAAACAAGTTGTA 22370 || || ||||| || || || || || || ||| || ||||||||||| || || Sbjct 41424 CGAATACCATCAATATCTACTGGAGGGGCAGCAATGAAAGCGATAATAAATACAGAAGTT 41483 Query 22371 GCGG-CAAGGAGGCACGGAATCATAAGGACTCCGAACCATCCTACATAAAGACGGTT 22426 |||| ||| | | | || ||||| | || || |||||||| | ||||||||||| Sbjct 41484 GCGGTCAATAAAGTA-GGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTT 41539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145801703685360