Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq98 526 3e-144 seq28 387 2e-102 seq69091 125 8e-24 seq28336 104 3e-17 seq48643 82.4 9e-11 >seq98 Length=41871 Score = 526 bits (582), Expect = 3e-144 Identities = 716/994 (72%), Gaps = 4/994 (0%) Strand=Plus/Plus Query 124040 TCAGCAGATGCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATA 124099 ||| ||| ||||||||||| ||||||||||| ||||| | ||||||||||||||||||| Sbjct 40575 TCAACAGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAACTTCCATA 40634 Query 124100 CCCAAGTTTGCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCGTTAGCATCA 124159 || | ||| || | ||| | || |||| |||| || | | || | | |||| Sbjct 40635 CCAAGGTTAGCACGGTTGATAATATCAGCCCAAGTATTAATTACACGACCTTGACTATCA 40694 Query 124160 ACAACTGATTGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGATACCCATA 124219 || || |||||||| || ||||||||||| |||||||| ||||| |||| ||||| | | Sbjct 40695 ACTACGGATTGGTTGAAATTGAAACCATTTAAGTTGAAAGCCATAGTGCTAATACCTAAA 40754 Query 124220 GAGGTTAACCATACACATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACTTCTTGAG 124279 | ||| ||||| | || || ||||| || | |||||||||||||| | | ||| Sbjct 40755 GCGGTGAACCAGATACCTATTACAGGCCAAGCAGCTAGGAAGAAGTGTAATGAACGAGAG 40814 Query 124280 TTGTTGAATGAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGCTACTATG 124339 |||||||| |||||| |||||||| | || ||||| ||||| || || ||||| || Sbjct 40815 TTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATA 40874 Query 124340 TTGTATGTTTCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTGCTCTGTT 124399 || || ||||| ||||||| || || || ||||| | || || || | ||||| Sbjct 40875 TTATAAGTTTCCCCTTCTTGACCAAATTTGTAACCTTCATTAGCAGATTCATTTTCTGTA 40934 Query 124400 GTTTCTCTGATTAGAGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAAAGATCCT 124459 ||||| ||||| | | || || || | ||||||||||| || ||||| || || Sbjct 40935 GTTTCCCTGATCAAACTTGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCG 40994 Query 124460 CCGAACATTCCTGCTACTCCTGCCATGTGGAAAGGATGCATTAGAATGTTATGCTCTGCT 124519 ||||| | || ||||| ||| ||| || || || ||||| || ||||| ||||| || Sbjct 40995 CCGAATACACCCGCTACGCCTAACATATGAAATGGGTGCATAAGGATGTTGTGCTCAGCC 41054 Query 124520 TGGAAAACGAACATAAAGTTGAAAGTACCTGAGATACCAAGTGGCATACCATCAGAGAAT 124579 ||||| || | |||||||||||||||||| ||||| || | |||||||| || || || Sbjct 41055 TGGAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAAAGGCATACCGTCCGAAAAG 41114 Query 124580 GAACCCTGACCAAATGGGTATACTAAGAATACAGCGAATGCAGCAGATACTGGTGCTGAA 124639 || ||||||| |||||| | ||||| |||||| || || | || || |||||| Sbjct 41115 CTTCCTTGACCAATTGGGTAAATCAAGAAGACAGCGGTAGCTGCTGCAACAGGAGCTGAA 41174 Query 124640 TAAGCAACACAGATCCAAGGACGCATTCCTAATCTGTATGATAGTTCCCACTGTCTTCCC 124699 || |||||| |||||||| ||||| || || | | | |||||||||| | ||| Sbjct 41175 TATGCAACAGCAATCCAAGGGCGCATACCCAAACGGAAACTAAGTTCCCACTCACGGCCC 41234 Query 124700 ATGTATGCTGAAATACCAATAAGGAAGTGGAAAATTACCAACTGATAAGGACCACCATTA 124759 ||||| | | ||||| | |||||| | || | | | ||||||||| || || Sbjct 41235 ATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTTG 41294 Query 124760 TACAACCATTCATCAACAGTTGCTGCTTCCCAGATTGGGTAGAAGTGTAGTCCGATAGCG 124819 || |||||||||||||| | ||| |||||||| |||||||| ||||| | || |||||| Sbjct 41295 TATAACCATTCATCAACGGATGCAGCTTCCCATATTGGGTAAAAGTGCAAACCTATAGCG 41354 Query 124820 TTTGATGATGGAACAACTGCACCAGAGATGATGTTGTTACCATATAAGAAAGAACCCGCT 124879 || | |||| || |||||||| || || ||||| || || | ||||| || | Sbjct 41355 GCAGAAGTAGGAATAATGGCACCAGAAATAATATTGTTTCCGTAAAGTAAAGATCCAGAA 41414 Query 124880 ACTGGTTCTCTGATTCCGTCGATATCGACAGGAGGTGCTGCAATAAATGCAACGATGAA- 124938 || ||||| | || || || ||||| || ||||| || ||||| || || | || || Sbjct 41415 ACGGGTTCACGAATACCATCAATATCTACTGGAGGGGCAGCAATGAAAGCGATAATAAAT 41474 Query 124939 ACATGCTGCTGCTGTGAGTAAGCATGGAATCATTAGAACACCAAACCAACCAACATAAAT 124998 ||| | | ||| || | ||| || ||||| | |||||||||||| |||| |||| Sbjct 41475 ACA-GAAGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAG 41533 Query 124999 TCTGTTGTTTGTTGAT-GTTACCCACTCACAGAA 125031 | ||| || | || | |||| ||| | |||||| Sbjct 41534 ACGGTT-TTCGGTGCTGGTTATCCAGTTACAGAA 41566 >seq28 Length=37419 Score = 387 bits (428), Expect = 2e-102 Identities = 714/1041 (69%), Gaps = 27/1041 (3%) Strand=Plus/Plus Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925 |||||| ||||| || | |||| || || || ||||||| || || ||||| || || Sbjct 30313 TTAAAGAGCGTTTCCACGGGGTAGAACCTCCTCGGGGAATATAAGGTTTTCATGAGGCTG 30372 Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985 || || | |||||| || | ||||||||||| | |||||| || || |||||||| Sbjct 30373 ATCTTGAGCCGCCATCCAAGCACGAATGCCTTCATTTAAAAGAATATTTTTGGTATAGAA 30432 Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045 |||||| || || || ||||| ||||| | || || ||||| || ||||| || || | Sbjct 30433 AGTCTCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGAGAAACGAAGTCATAGGCACG 30492 Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105 ||||| || || |||||||| | || | || |||| | ||| | || || || Sbjct 30493 CAGGTTCAGAGCCAGACCTACTACTCCAAGAGCGCTCATCCATAAACCAGTTACTGGTAC 30552 Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGA 123165 || ||||||| ||| ||||| | | ||| || ||||| || | ||||| || || || Sbjct 30553 AAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGGGA 30612 Query 123166 CCAGAATCTGTTCGCTGTAATCATACTATAAGTTTCTTCTTCCTGTGTAGGATCGAATGC 123225 ||| || | ||| || || | ||| |||||||||||| | || || || | || || Sbjct 30613 CCAAAAGCGGTTGGCGGTGACCATTGAATAAGTTTCTTCGGCTTGAGTTGGGTTAAAAGC 30672 Query 123226 TCTGAAAGTTGTAGATTGAATCTTACCTTCAGTATATTGTGATGTGTCTTCATACAATGT 123285 | ||| |||| ||| | || ||| ||||||| | || || Sbjct 30673 GCGGAA---TGTAT-TTGCA-----CCATCACC------------GTCTTCAAATAAAGT 30711 Query 123286 GTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCTAGTATTCCTGCAAC 123345 || | || || ||||||||||| || || || | || | || | || || ||||| Sbjct 30712 ATTTTCGACAGTAGCACCATGAATAGCGCACAGCAGAGCCGCGCCCAATACACCAGCAAC 30771 Query 123346 ACCCATCATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTGTATGAATAAGATATA 123405 |||||||| ||||| || |||| ||| || || || ||||| | || | ||| | Sbjct 30772 TCCCATCATATGAAACGGGTTCAGTGTCCAATTATGAAACCCTTGGAAAAACAGGATGAA 30831 Query 123406 ACGAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACTGTGCTGACCTAGTGG 123465 ||||| || ||||| ||||| || ||||| |||||||||| | |||||||| || Sbjct 30832 TCGAAATATAGCTGCTACACCAAAACTAGGTGCAAAGAACCAACCGGATTGACCTAGCGG 30891 Query 123466 ATAGATCAGAAAGATGCTAGTGAAGACTGCGATAACAGCAGAGAATGCGAGTGCGTTGTA 123525 ||| ||||| || | | || || || || | |||| ||||||| ||| || || Sbjct 30892 ATAAATCAGGAATACAGAAACAAAAACAGCAATTGGACCAGAAAATGCGATTGCATTATA 30951 Query 123526 AGGTC-TAATGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCATGAAACCTATGAGTC 123584 ||||| ||| | || || || || |||||||| | | ||| |||||||| |||| Sbjct 30952 AGGTCGCAATTGC-ACGGATCGAGCAATTTCAAATTGACGTAACATAAAACCTATTAGTC 31010 Query 123585 CAAAGACTCCATGTAATGCTACAAAGTTCCATAGACCTCCGAGTTGTAACCAACGAACGA 123644 | || |||| || | || ||||| |||| ||||| || | ||| |||||||| | Sbjct 31011 CGAAAGCTCCGTGGAGAGCAACAAAAGTCCACAGACCACCTAATTGACACCAACGAGTAA 31070 Query 123645 ATGATCCTTGTGCTTCAGGTCCCCAAAGGAACATGAGACTATGACCCATTGCGTCACCAG 123704 | ||||| |||||||| ||||| || |||| | | ||| | | | | ||| Sbjct 31071 AATCCCCTTGCGCTTCAGGACCCCATAGTAACAACAAAGAATGTGCTAAACTATTAGCAG 31130 Query 123705 GTGTGGAGACTGCTGCTGTTAAGAAGTTTGCTCCCTCAAGATATGAAGATG--CAATACC 123762 | || || ||||| || ||||||||||| || || | ||| | || || |||| || Sbjct 31131 GGGTAGAAACTGCAGCGGTTAAGAAGTTGCAGCCTTCCAAATA-GGAGCTGGCCAAT-CC 31188 Query 123763 ATGTGTATACCATGATGTAACGAAGGTAGTTCCTAAGAACCAACCACCGATTGATAGATA 123822 ||| |||||||| || || || || || || ||| ||||||||| || | | | || Sbjct 31189 ATGGGTATACCAGGAGGTTACAAAAGTTGTACCTGTGAACCAACCCCCTAAAGCAAAGTA 31248 Query 123823 CGCACAAGGCAGAAGTAAAAGACCAGACCATCCTATGAATACAAAACGATCTCTCTTTAA 123882 |||||||| | || || ||||| ||||| |||| ||| |||||||| || ||| || Sbjct 31249 GGCACAAGGAAAGAGCAATAGACCGGACCAACCTACGAAAACAAAACGGTCCCTCCGCAA 31308 Query 123883 CCAGTCGTCAAGAACATCAAA 123903 |||||| || | || |||||| Sbjct 31309 CCAGTCATCCATAATATCAAA 31329 >seq69091 Length=3183 Score = 125 bits (138), Expect = 8e-24 Identities = 168/229 (73%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 139315 CTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTT 139374 |||| || ||||||||||| || || ||||| || || | ||||||||| ||||| |||| Sbjct 2165 CTTGGGCAGTGCAGATGTTGCTAGTAGCTTTATCCCTGCGAATATGCTGTTCTCTTGTTT 2106 Query 139375 GTAGTGCTAATCTGTAT-GCAGGATTGCCTTCGCTGTC--CACTGACTGACCTACAATTC 139431 | | || | | ||| ||||| || ||| || ||||||| ||| | ||||| Sbjct 2105 GCATGGCCATAC-GTAGAGCAGGCTTCCCTGTAGAATCAACACTGAC--ACCAATAATTC 2049 Query 139432 TGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTC 139491 | ||||| ||| | ||||| |||| | || ||| || ||||| || ||||||||||| | Sbjct 2048 TTCCAGGCATCATCCTCTTGTACTCTTGTGATGTAGCCAAGAAAGCTGCATGAGGACCAC 1989 Query 139492 CGTATCCCATAGGAATACCAAACCTTTGCATACTACCTACAGCAATATC 139540 | || ||||| |||| ||||||||| || ||| ||| ||||||| Sbjct 1988 CATACCCCATTGGAACACCAAACCTCTGAGCTGAACCAACAACAATATC 1940 Score = 113 bits (124), Expect = 5e-20 Identities = 124/165 (75%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918 |||||| || || || ||||| ||||||| | ||| || || |||| || || | ||| Sbjct 1624 CATTGCTTCAGCAGCAGCAGTACCTTCATCAAGTAGGGAAGCATTTGACATGGGCAGTCC 1565 Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978 || || || || || | |||||||| || | |||| |||||||| ||||||||||| Sbjct 1564 GGTGAGATCAGTTATCACAGTTTGGTAGTTAAGCAAAGACTCCAATCTCCCCTGAGATAT 1505 Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTC 140023 |||||| ||||| || ||||| ||||||||| |||||||| Sbjct 1504 CTCAGCCTGATATGGCGTGTATTGGGTGTACCAAGCTGGATTCTC 1460 >seq28336 Length=2969 Score = 104 bits (114), Expect = 3e-17 Identities = 90/112 (80%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 138158 TACAAATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCC 138217 || |||||||| | |||||| |||||||||||||| | |||||||| |||||||| Sbjct 2137 TAGAAATGGTGCCAAATGTTTCTTCACACCAATAGGACCCATACCAGGACCACCACCTCC 2196 Query 138218 ATGTGGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCA 138269 ||| ||||| || ||||||||||| | ||| ||||| || ||||| || ||| Sbjct 2197 ATGGGGAATGCAAAATGTCTTATGGAGATTAAGATGGCAAACATCAGCTCCA 2248 >seq48643 Length=683 Score = 82.4 bits (90), Expect = 9e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 138294 ACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATC 138353 ||||||||||| | || || ||||| | |||||| ||||| ||||||||||||| ||| Sbjct 411 ACCTGTGCATTCATGTTAGCTCCATCCATATATACTTGACCTCCATTGTCATGAATTATC 470 Query 138354 TTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGT 138406 || ||||||| || | ||| | || ||||||||||| |||||||| Sbjct 471 TTGCATATCTCATCAATTCCTTCTTCGTACACTCCATGAGTCGAAGGATATGT 523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577304742830240