Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq98 563 1e-155 seq28 517 1e-141 >seq98 Length=41871 Score = 563 bits (624), Expect = 1e-155 Identities = 725/995 (73%), Gaps = 4/995 (0%) Strand=Plus/Plus Query 26725 TCAGCAGCAGCAAGATCCAATGGAAAATTATGGGCGTTCCTTTCGTGAATCACCTCTAAT 26784 ||| ||||||| || || | || || || || || || | ||| || || || || | Sbjct 40575 TCAACAGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAACTTCCATA 40634 Query 26785 CCAAGACCAGCACGGTTGAGAACGTCTGCCCAAGTGTTGAGCACACGACCCTGTGAATCA 26844 ||||| ||||||||||| || || |||||||| || | |||||||| || |||| Sbjct 40635 CCAAGGTTAGCACGGTTGATAATATCAGCCCAAGTATTAATTACACGACCTTGACTATCA 40694 Query 26845 ATCACAGACTGATTGAAGTTGAAACCGTTGAGATTGAAAGCCATCGTGGATACACCAAGT 26904 | || || || ||||| |||||||| || | ||||||||||| ||| | ||| | Sbjct 40695 ACTACGGATTGGTTGAAATTGAAACCATTTAAGTTGAAAGCCATAGTGCTAATACCTAAA 40754 Query 26905 GCGGTGAACCAGATGCCAACAACGGGCCATGCAGCAAGGAAGAAGTGCAAGGAACGTGAG 26964 |||||||||||||| || | || ||||| ||||| ||||||||||| || ||||| ||| Sbjct 40755 GCGGTGAACCAGATACCTATTACAGGCCAAGCAGCTAGGAAGAAGTGTAATGAACGAGAG 40814 Query 26965 TTGTTGAATGAAGCATATTGGAAGATCAAACGACCGAAGTAGCCATGTGCTGCGACGATG 27024 |||||||| |||||||||||||||||| || || || || ||||| || || ||||| Sbjct 40815 TTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATA 40874 Query 27025 TTGTAGGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGTGACTCAGTTTCAGTC 27084 || || || || |||||||||| || || ||||| | || || ||| |||| || Sbjct 40875 TTATAAGTTTCCCCTTCTTGACCAAATTTGTAACCTTCATTAGCAGATTCATTTTCTGTA 40934 Query 27085 GTCTCACGGACGAGTGAAGATGTAACCAGACTTCCGTGCATAGCAGAGAAAAGAGATCCA 27144 || || | || | || || |||| || ||||||||| ||| || || || Sbjct 40935 GTTTCCCTGATCAAACTTGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCG 40994 Query 27145 CCGAATACCCCAGCAACACCGAGCATGTGGAACGGGTGCATAAGGATATTGTGTTCTGCC 27204 |||||||| || || || || | ||| || || |||||||||||||| ||||| || ||| Sbjct 40995 CCGAATACACCCGCTACGCCTAACATATGAAATGGGTGCATAAGGATGTTGTGCTCAGCC 41054 Query 27205 TGGAATACAAGCATGTAGTTAAAAGTACCAGAGATACCAAGAGGCATAGCATCGGAGAAA 27264 |||||||||| ||| |||| |||||||||||||| || | ||||||| | || || || Sbjct 41055 TGGAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAAAGGCATACCGTCCGAAAAG 41114 Query 27265 GAACCTTGACCGAAAGGATAGACGAGGAATACTGCACTCGCAGCAGCGACTGGAGCAGAA 27324 |||||||| | || || | | ||| || || | || || || || ||||| ||| Sbjct 41115 CTTCCTTGACCAATTGGGTAAATCAAGAAGACAGCGGTAGCTGCTGCAACAGGAGCTGAA 41174 Query 27325 TATGCTACACAGATCCATGGACGCATACCTAAACGATATGAGAGTTCCCACTCACGTCCC 27384 ||||| ||| ||||| || |||||||| ||||| | |||||||||||||| ||| Sbjct 41175 TATGCAACAGCAATCCAAGGGCGCATACCCAAACGGAAACTAAGTTCCCACTCACGGCCC 41234 Query 27385 ATATAAGCATAGATGCCGATAAGGAAGTGGAAGACTACCAGTTGGAAAGGACCACCGTTA 27444 || ||| | | || | | |||||| | || | |||| ||||||| ||||| Sbjct 41235 ATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTTG 41294 Query 27445 TACAACCACTCATCGAGTGATGCTGCTTCCCAGATTGGGTAGAAGTGGAGACCGATTGCA 27504 || ||||| ||||| | ||||| |||||||| |||||||| ||||| | ||| || || Sbjct 41295 TATAACCATTCATCAACGGATGCAGCTTCCCATATTGGGTAAAAGTGCAAACCTATAGCG 41354 Query 27505 TTTGAACTTGGGACAACTGCACCAGAAATGATGTTGTTGCCATACATAAGTGAACCAGCA 27564 ||| | || | || ||||||||||| || ||||| || || | | || |||| | Sbjct 41355 GCAGAAGTAGGAATAATGGCACCAGAAATAATATTGTTTCCGTAAAGTAAAGATCCAGAA 41414 Query 27565 ACGGGTTCACGAATACCGTCAATATCGACGGGTGGTGCTGCGATGAATGCGACAATGAA- 27623 ||||||||||||||||| |||||||| || || || || || ||||| |||| ||| || Sbjct 41415 ACGGGTTCACGAATACCATCAATATCTACTGGAGGGGCAGCAATGAAAGCGATAATAAAT 41474 Query 27624 GCAGACAGTTGCTGCTAACAGTGTTGGGATCATCAGTACACCGAACCAACCAACATACAA 27683 |||| |||||| | || | || |||||||||| ||||| ||||| |||| || | Sbjct 41475 ACAGA-AGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAG 41533 Query 27684 ACGGTTGTTAGTTGAT-GTCACCCACTCACAGAAA 27717 |||||| || | || | || | ||| | ||||||| Sbjct 41534 ACGGTT-TTCGGTGCTGGTTATCCAGTTACAGAAA 41567 >seq28 Length=37419 Score = 517 bits (572), Expect = 1e-141 Identities = 704/977 (72%), Gaps = 4/977 (0%) Strand=Plus/Plus Query 23429 AAAGTTTTCGTGTGGTTGGTCAATAGTCATCATCCATTCACGGAGGCCATTGTTCAACAA 23488 || |||||| || || || || || | |||||| |||| | ||| | || || | Sbjct 30355 AAGGTTTTCATGAGGCTGATCTTGAGCCGCCATCCAAGCACGAATGCCTTCATTTAAAAG 30414 Query 23489 AATATTTTTCGTGTAGAAGGTCTCATACGAACCATCTTCAGCAGCACGAATCTCTTGACT 23548 ||||||||| || ||||| |||||| | | |||||| || ||||| || || ||| Sbjct 30415 AATATTTTTGGTATAGAAAGTCTCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGAGA 30474 Query 23549 CACAAAATCATAAGCACGAAGATTAAGAGCAAGCCCAATGATGCCAATAGAAGAGACCCA 23608 || || ||||| ||||| || || ||||| || || | | |||| || | ||| Sbjct 30475 AACGAAGTCATAGGCACGCAGGTTCAGAGCCAGACCTACTACTCCAAGAGCGCTCATCCA 30534 Query 23609 AAGACCCATGACAGGAACAAACAACATAAAGAAGTGCAACCAACGCTTATTGCTAAACGC 23668 | ||| | || || ||||| ||||||||||| || |||||||| |||||| ||| || Sbjct 30535 TAAACCAGTTACTGGTACAAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGC 30594 Query 23669 AACCCCGAAGATTTGTGACCAAAAACGATTTGCTGTAACCATCGAATAGGTCTCCTCCTC 23728 |||||| |||||||| |||||||| || || || || ||||| ||||| || || || | Sbjct 30595 AACCCCAAAGATTTGGGACCAAAAGCGGTTGGCGGTGACCATTGAATAAGTTTCTTCGGC 30654 Query 23729 CTGAGTGGAATCGAACGCTTTAAAAGTGTTTGCCTGTTCTCCATCTTCATACAGTGTATT 23788 ||||| | | || || || || ||||| || || |||||| | | ||||| Sbjct 30655 TTGAGTTGGGTTAAAAGCGCGGAATGTATTTGCACCATCACCGTCTTCAAATAAAGTATT 30714 Query 23789 CTCGACAGTAACTCCATGAATAGCAGAGAGAAGTGCTCCTCCCAGTATACCAGCAACTCC 23848 ||||||||| | ||||||||||| | || || || | |||| || |||||||||||| Sbjct 30715 TTCGACAGTAGCACCATGAATAGCGCACAGCAGAGCCGCGCCCAATACACCAGCAACTCC 30774 Query 23849 CATCATATGGAAGGGGTTGAGCGTCCAGTTATGAAAGCCCTGGAGGAAGAGAAGGAACCT 23908 ||||||||| || ||||| || ||||| |||||||| || |||| || || | ||| | Sbjct 30775 CATCATATGAAACGGGTTCAGTGTCCAATTATGAAACCCTTGGAAAAACAGGATGAATCG 30834 Query 23909 GAAAATCGCCGCAACACCGAAACTCGGCGCAAAGAACCAAGATGACTGTCCCAAAGGATA 23968 || || || || ||||| ||||| || |||||||||||| || || || | ||||| Sbjct 30835 AAATATAGCTGCTACACCAAAACTAGGTGCAAAGAACCAACCGGATTGACCTAGCGGATA 30894 Query 23969 GATGAGGAATACAGACACGAATACAGCAATAGGACCAGAAAAAGCAATCGCATTGTAGGG 24028 || ||||||||||| || || |||||||| ||||||||||| || || ||||| || || Sbjct 30895 AATCAGGAATACAGAAACAAAAACAGCAATTGGACCAGAAAATGCGATTGCATTATAAGG 30954 Query 24029 ACG-GATTCCAATTAGACGTGCCAGTTCAAACTGACGTAACATAAAACCTATAAGTGCAA 24087 || ||| || | || || | |||||| |||||||||||||||||||| ||| | | Sbjct 30955 TCGCAATTGCACGGA-TCGAGCAATTTCAAATTGACGTAACATAAAACCTATTAGTCCGA 31013 Query 24088 AGGCACCGTGGAGAGCAACAAAGGACCAAAGCCCTCCAAGTTGGAGCCACCGTTGAAAGT 24147 | || ||||||||||||||||| | ||| || || || | ||| ||| || ||| | Sbjct 31014 AAGCTCCGTGGAGAGCAACAAAAGTCCACAGACCACCTAATTGACACCAACGAGTAAAAT 31073 Query 24148 CCCCTTGAGACTCAGGACCCCAAAGTAGAAGAAGAGAATGACCCATAGCGTCAGCAGGCG 24207 ||||||| | ||||||||||| |||| | | |||||| | | | | |||||| | Sbjct 31074 CCCCTTGCGCTTCAGGACCCCATAGTAACAACAAAGAATGTGCTAAACTATTAGCAGGGG 31133 Query 24208 TCGAGACAGCTGCCGTAAGAAAGTTAGCA-CCCTCAAGATAGGAACTAGCAAGTCCATGG 24266 | || || || || || | ||||| ||| || || | |||||| || || | ||||||| Sbjct 31134 TAGAAACTGCAGCGGTTAAGAAGTT-GCAGCCTTCCAAATAGGAGCTGGCCAATCCATGG 31192 Query 24267 GTGTACCAACTCGTAACAAAAGCTGTGCCAGTAAGCCAACCGCCAATGGCAAGATAAGCA 24326 || ||||| || ||||||| ||| || || | |||||| || | |||| || ||| Sbjct 31193 GTATACCAGGAGGTTACAAAAGTTGTACCTGTGAACCAACCCCCTAAAGCAAAGTAGGCA 31252 Query 24327 GTGGGAAGAAGTAGGAGTCCAGACCAACCCACAAAGACAAAGCGATCCCGTTTAACCCAG 24386 |||| || | || || |||||||| || || ||||| || |||| | |||| Sbjct 31253 CAAGGAAAGAGCAATAGACCGGACCAACCTACGAAAACAAAACGGTCCCTCCGCAACCAG 31312 Query 24387 TCGTCCAAGATGTCAAA 24403 || |||| || ||||| Sbjct 31313 TCATCCATAATATCAAA 31329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 663547729055840