Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_020859.1 Length=175430 Score E Sequences producing significant alignments: (Bits) Value seq98 616 2e-171 seq28 538 4e-148 seq258 89.7 6e-13 >seq98 Length=41871 Score = 616 bits (682), Expect = 2e-171 Identities = 734/993 (74%), Gaps = 2/993 (0%) Strand=Plus/Minus Query 165769 TTCTGCGAATGGGTTACCAGCACAAATAACCGTCTGTATGTCGGTTGGTTTGGTACGCTG 165828 ||||| | ||| | |||||||| | |||||||| || | || ||||||||| || Sbjct 41566 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 41507 Query 165829 ATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCATCGCTGCTCC 165887 ||||| || ||| | ||| | |||||| |||| || || |||| ||||| ||||| || Sbjct 41506 ATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCCC 41448 Query 165888 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCTCTGATGTATGGTAACAA 165947 || || || || || || || ||||||||||| |||| ||| | | || || ||||| Sbjct 41447 TCCAGTAGATATTGATGGTATTCGTGAACCCGTTTCTGGATCTTTACTTTACGGAAACAA 41388 Query 165948 CATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTACACTTCTATCCCAT 166007 || || |||||||| || |||| |||| ||| || ||| | ||||| || || || Sbjct 41387 TATTATTTCTGGTGCCATTATTCCTACTTCTGCCGCTATAGGTTTGCACTTTTACCCAAT 41328 Query 166008 CTGGGAAGCCGCATCGCTTGACGAATGGCTCTATAACGGTGGTCCTTTCCAACTGGTTGT 166067 |||||||| ||||| |||| |||||| | || ||||| ||||||| |||| |||| Sbjct 41327 ATGGGAAGCTGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGT 41268 Query 166068 CTTCCACTTCCTGATTGGCATCTATGCCTACATGGGTCGTGAGTGGGAACTGTCTTACCG 166127 | |||||| | |||| | | |||||||| |||||||||||||| || ||| Sbjct 41267 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGCCGTGAGTGGGAACTTAGTTTCCG 41208 Query 166128 TCTAGGTATGCGTCCATGGATCTGTGTTGCTTACTCAGCACCAGTCGCTGCTGCGAGTGC 166187 | | |||||||| || ||||| |||||| || ||||| || || || || || | || Sbjct 41207 TTTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCTACCGC 41148 Query 166188 AGTATTCCTAGTATATCCTTTCGGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGGAAT 166247 || ||| | | || || | |||||||| || || || || | ||||| | ||||| Sbjct 41147 TGTCTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCGGACGGTATGCCTTTAGGAAT 41088 Query 166248 CTCAGGAACATTCAACTACATGTTGGTCTTCCAAGCTGAGCACAATATTCTCATGCATCC 166307 ||| || || ||||||| ||| | || ||||| ||||||||||| || || ||||| || Sbjct 41087 CTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCC 41028 Query 166308 CTTCCATATGCTCGGCGTTGCTGGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGCACGG 166367 || |||||| | ||||| || || ||||| || ||| | || ||||||||||| || Sbjct 41027 ATTTCATATGTTAGGCGTAGCGGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG 40968 Query 166368 AAGTTTGGTTACTTCTTCTCTCGTTAGAGAGACGACTGAAACCGAATCCCAAAACTACGG 166427 ||||| || || | | | || || || || |||| ||||| || | || Sbjct 40967 TTCCTTGGTAACCTCAAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAGG 40908 Query 166428 TTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTCGG 166487 |||||| || || ||||||| ||||| || || |||||||||||||||||||| || || Sbjct 40907 TTACAAATTTGGTCAAGAAGGGGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGG 40848 Query 166488 TCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTGC 166547 || |||||||||||||| ||| ||||||||||| || || || ||||||||||| || Sbjct 40847 CCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCATTACACTTCTTCCTAGC 40788 Query 166548 TGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCAA 166607 ||| |||||||| | || |||||||||||||| | || | ||| ||||| ||||| Sbjct 40787 TGCTTGGCCTGTAATAGGTATCTGGTTCACCGCTTTAGGTATTAGCACTATGGCTTTCAA 40728 Query 166608 CCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACAC 166667 | | || |||||||| |||||||| ||| | ||||| |||| |||||||| | || || Sbjct 40727 CTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAATAC 40668 Query 166668 CTGGGCAGATGTTCTTAACCGCGCTGGTCTCGGTATGGAAGTTATGCATGAGCGTAACGC 166727 ||||| ||| || | ||||| ||| || |||||||||||||||||||| ||||| || Sbjct 40667 TTGGGCTGATATTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGC 40608 Query 166728 ACACAACTTCCCCCTCGACCTCGCTGCTGCTGA 166760 ||||||||||| || ||||| ||||||| ||| Sbjct 40607 TCACAACTTCCCTCTAGACCTAGCTGCTGTTGA 40575 >seq28 Length=37419 Score = 538 bits (596), Expect = 4e-148 Identities = 738/1025 (72%), Gaps = 16/1025 (2%) Strand=Plus/Minus Query 167014 TTTGATGTCCTCGATGACTGGCTTAAAAGGGATCGTTTTGTTTTTGTTGGCTGGTCTGGA 167073 |||||| | | ||||||||| | ||||| ||||||||||| || || ||||| || Sbjct 31329 TTTGATATTATGGATGACTGGTTGCGGAGGGACCGTTTTGTTTTCGTAGGTTGGTCCGGT 31270 Query 167074 CTTCTTCTTTTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACTTTC 167133 || | || ||||| ||| || ||||| | || |||||| | || || || ||||| Sbjct 31269 CTATTGCTCTTTCCTTGTGCCTACTTTGCTTTAGGGGGTTGGTTCACAGGTACAACTTTT 31210 Query 167134 GTCACGAGTTGGTATACTCATGGACTCGCGTCCAGTTATCTTGAGGG-TGCGAACTTTCT 167192 || || |||||||| |||||| | || | ||| | || || ||| ||||| | Sbjct 31209 GTAACCTCCTGGTATACCCATGGATTGGCCAGCTCCTATTTGGAAGGCTGC-AACTTCTT 31151 Query 167193 TACTGCGGCAGTTAGTACTCCAGCAGATTCTATGGGTCATTCTTTACTTCTTCTATGGGG 167252 || || |||||| ||| || || || | | | |||||||| | | |||||||| Sbjct 31150 AACCGCTGCAGTTTCTACCCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGG 31091 Query 167253 TCCTGAATCTCAAGGGGATTTCGTCAGGTGGCTCCAACTTGGGGGACTCTGGGCTTTTGT 167312 ||||||| | ||||||||||| | ||| ||| | || || || ||| ||||||| Sbjct 31090 TCCTGAAGCGCAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGT 31031 Query 167313 GGCGCTCCACGGAGCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAACTTGCTCG 167372 || ||||||||||| || | || || ||||| ||| | || || |||||| ||||||| Sbjct 31030 TGCTCTCCACGGAGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAAATTGCTCG 30971 Query 167373 ---CCTG--ATTGGTATCCGTCCCTACAATGCTATTGCTTTCTCTGGTCCTATTGCTGTC 167427 | || |||| || || || ||||| || || || |||||||| |||||||| Sbjct 30970 ATCCGTGCAATTG-----CGACCTTATAATGCAATCGCATTTTCTGGTCCAATTGCTGTT 30916 Query 167428 TTCGTTAGCGTTTTCCTTCTCTATCCCCTCGGTCAAAGCAGCTGGTTCTTTGCCCCGTCC 167487 || ||| || ||||| | ||||| || |||||| | | ||||||||||| || Sbjct 30915 TTTGTTTCTGTATTCCTGATTTATCCGCTAGGTCAATCCGGTTGGTTCTTTGCACCTAGT 30856 Query 167488 TTCGGAGTCGCCGCCATCTTCCGATTCCTCCTCTTCCTCCAAGGATTCCACAACTGGACA 167547 || || || || || || || |||||| |||| || ||||||| || || || |||||| Sbjct 30855 TTTGGTGTAGCAGCTATATTTCGATTCATCCTGTTTTTCCAAGGGTTTCATAATTGGACA 30796 Query 167548 CTGAATCCATTTCATATGATGGGTGTAGCAGGTATCCTGGGTGGTGCATTGCTTTCTGCA 167607 ||||| || |||||||||||||| || || ||| | |||| | || |||| | || Sbjct 30795 CTGAACCCGTTTCATATGATGGGAGTTGCTGGTGTATTGGGCGCGGCTCTGCTGTGCGCT 30736 Query 167608 ATCCATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGGTGAGCAAGCAAACACTTTT 167667 || ||||||| ||| || || |||||||| | |||||| ||||| ||||| || || Sbjct 30735 ATTCATGGTGCTACTGTCGAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTC 30676 Query 167668 AAGGCATTCGATTCTACTCAGGAAGAAGAGACTTATTCAATGGTTACAGCAAACCGATTC 167727 || || | | ||||| | ||||| |||||||||||||| || || ||||| || Sbjct 30675 CGCGCTTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCCAACCGCTTT 30616 Query 167728 TGGTCTCAGATCTTCGGCATTGCTTTCAGCAACAAACGCTGGCTTCATTTCTTTATGTTA 167787 ||||| || ||||| || ||||||| ||| ||||| ||| | ||||||||||||||| Sbjct 30615 TGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTA 30556 Query 167788 TTCGTTCCCGTTATGGGACTTTGGACATCATCG--ATTGGCATCATTGGTCTGGCTCTTA 167845 || || || || | || | ||| || | || |||| | | ||||||||||| | Sbjct 30555 TTTGTACCAGTAACTGGTTTATGG--ATGAGCGCTCTTGGAGTAGTAGGTCTGGCTCTGA 30498 Query 167846 ATCTTCGTGCTTACGATTTCGTTTCTCAAGAGATCAGAGCGGCGGAGGATCCAGAGTTTG 167905 | || ||||| || || ||||||||||| || ||| | || ||||| ||||| || |||| Sbjct 30497 ACCTGCGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTG 30438 Query 167906 AAACTTTCTATACTAAAAACATCCTTCTGAATGAAGGTCTTCGAGCATGGTTAGCACCTA 167965 | ||||||||||| ||||| || ||| | |||||||| |||| || ||| | || || Sbjct 30437 AGACTTTCTATACCAAAAATATTCTTTTAAATGAAGGCATTCGTGCTTGGATGGCGGCTC 30378 Query 167966 TCGATCAACCTCATGAGAACTTTGTGTTCCCAGAGGAAGTTCTCCCACGAGGCAACGCAC 168025 ||||| |||||||| ||| || | ||||| ||||| ||||| || || || ||||| | Sbjct 30377 AAGATCAGCCTCATGAAAACCTTATATTCCCCGAGGAGGTTCTACCCCGTGGAAACGCTC 30318 Query 168026 TATAA 168030 | ||| Sbjct 30317 TTTAA 30313 >seq258 Length=11790 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 18119 CTCCCTTCATTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTA 18178 ||||| | |||||||||||||||| || ||||| ||| ||||||| || |||||||| Sbjct 4833 CTCCCGTTGTTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTA 4892 Query 18179 GGTTCAAATCCTACCTGGGGAG 18200 ||||| |||||||| ||||||| Sbjct 4893 GGTTCGAATCCTACTTGGGGAG 4914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559606265412800