Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_020874.1 Length=46198 Score E Sequences producing significant alignments: (Bits) Value seq98 461 2e-125 >seq98 Length=41871 Score = 461 bits (510), Expect = 2e-125 Identities = 701/989 (71%), Gaps = 12/989 (1%) Strand=Plus/Plus Query 25877 GCTAAGTCAAGTGGAAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCGAGGTTA 25936 |||| ||| || || ||||| ||||||||||| || ||||||||||| | || |||||| Sbjct 40584 GCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 40643 Query 25937 GCTCGGTTTAATACATCAGCCCATGTAGGTATTATCTTTCCATTAACATCTACTACTGAC 25996 || ||||| | | ||||||||| ||| |||| || | | ||| ||||| || Sbjct 40644 GCACGGTTGATAATATCAGCCCAAGTATTAATTACACGACCTTGACTATCAACTACGGAT 40703 Query 25997 TGGTTAAAGTTAAAACCATTTAGGTTAAATGCCATTGTGCAGATACCCATAGATGTCAGC 26056 ||||| || || |||||||||| ||| || ||||| |||| ||||| | || || | | Sbjct 40704 TGGTTGAAATTGAAACCATTTAAGTTGAAAGCCATAGTGCTAATACCTAAAGCGGTGAAC 40763 Query 26057 CATATGCCAACAACCGGCCAAGTAGCAAGAAAGAAATGAAGAGAACGGCTGTTATTAAAA 26116 || || || | || ||||||| ||| || ||||| || | ||||| ||| || ||| Sbjct 40764 CAGATACCTATTACAGGCCAAGCAGCTAGGAAGAAGTGTAATGAACGAGAGTTGTTGAAA 40823 Query 26117 CTCGCATACTGAAAAATTAATCTCCCAAAGTACCCGTGTGCAGCGACAATATTATATGTC 26176 || ||||| || || || |||| ||||| || || || || || || |||||||| || Sbjct 40824 CTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATATTATAAGTT 40883 Query 26177 TCTTCATCTTGCCCAAACTTATAGCCATAATTCTGTGAGACTTCCTCTGTCGTTT--CTG 26234 || | ||||| ||||| || || || | ||| || | | ||||| |||| ||| Sbjct 40884 TCCCCTTCTTGACCAAATTTGTAACCTTCATTAGCAGATTCATTTTCTGTAGTTTCCCTG 40943 Query 26235 --CAATAAGTGAGGAAGTAACCAAACTTCCGTGCATAGCAGCGAAAAGAGCTCCACCGAA 26292 ||| | |||| || ||||| || ||||||||| ||| || | || ||||| Sbjct 40944 ATCAA-ACTTGAG---GTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAA 40999 Query 26293 AACCCCAGCAACACCAGCCATATGGAATGGGTGCATGAGTATATTATGTTCTGCTTGGAA 26352 || || || || || |||||| ||||||||||| || || || || || || ||||| Sbjct 41000 TACACCCGCTACGCCTAACATATGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAA 41059 Query 26353 TACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATTCCATCACTAAAACTCCC 26412 ||| | ||||||||| |||||||||||||| || | |||||| || || ||| || || Sbjct 41060 TACAATCATAAAGTTGAAAGTACCAGAGATTCCTAAAGGCATACCGTCCGAAAAGCTTCC 41119 Query 26413 TTGTCCGAAAGGATAAACTAAGAACACTGCGAGAGCTGCGGATAGTGGTGCTGTATATGC 26472 ||| || | || |||| ||||| || ||| |||||| | | || |||| |||||| Sbjct 41120 TTGACCAATTGGGTAAATCAAGAAGACAGCGGTAGCTGCTGCAACAGGAGCTGAATATGC 41179 Query 26473 AACAAATATCCATGGTCTCATTCCTAGTCTGTAAGATAGTTCCCACTGTCTCCCTGCATA 26532 |||| ||||| || | ||| || | | | || |||||||||| | || || Sbjct 41180 AACAGCAATCCAAGGGCGCATACCCAAACGGAAACTAAGTTCCCACTCACGGCCCATGTA 41239 Query 26533 TGCTGCTACTCCTATTAAGAAGTGGAAGATAATGAGTTGATATGGTCCGCCATTGTATAG 26592 ||||| || | ||||||||| | | ||| |||| ||| || ||||| ||||||| Sbjct 41240 ACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTTGTATAA 41299 Query 26593 CCACTCGTCCAGTGTGCCAGCTTCCCAGATCGGGTAAAAATGTAGTCCGATTGCGTTAGA 26652 ||| || || | | |||||||||| || |||||||| || | || || ||| ||| Sbjct 41300 CCATTCATCAACGGATGCAGCTTCCCATATTGGGTAAAAGTGCAAACCTATAGCGGCAGA 41359 Query 26653 GGAGGGGACGACTGCTCCTGATATTATATTGTTTCCGTACATTAACGAGCCGGAAACTGG 26712 | || | | || || || || |||||||||||||| | ||| || || ||||| || Sbjct 41360 AGTAGGAATAATGGCACCAGAAATAATATTGTTTCCGTAAAGTAAAGATCCAGAAACGGG 41419 Query 26713 CTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATGAAGGCAAGTATAAA-ACATG 26771 ||||| || ||||| |||||||| || || || || ||||| || | ||||| ||| | Sbjct 41420 TTCACGAATACCATCAATATCTACTGGAGGGGCAGCAATGAAAGCGATAATAAATACA-G 41478 Query 26772 TAGTGGCTG-CGAGTAAGCAGGGTATCATAAGCACCCCGAACCATCCCACATAGAGACGG 26830 ||| || | | | ||| |||| ||||| | || || |||||||| | || |||||| Sbjct 41479 AAGTTGCGGTCAATAAAGTAGGG-ATCATCAAAACACCAAACCATCCAATGTAAAGACGG 41537 Query 26831 TTCTCAGTACTTGTAACCCACTCACAAAA 26859 || || || || || | ||| | ||| || Sbjct 41538 TTTTCGGTGCTGGTTATCCAGTTACAGAA 41566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147301524231040