Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_020878.1 Length=44945 Score E Sequences producing significant alignments: (Bits) Value seq98 551 2e-152 >seq98 Length=41871 Score = 551 bits (610), Expect = 2e-152 Identities = 723/996 (73%), Gaps = 8/996 (1%) Strand=Plus/Plus Query 40524 TCAGCAGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATA 40583 ||| ||| ||||| ||||||||| ||||||||||| ||||| || ||||| ||||||||| Sbjct 40575 TCAACAGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAACTTCCATA 40634 Query 40584 CCTAGACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCT 40643 || || | | ||| | || ||||||||||||| ||| || ||| | | || Sbjct 40635 CCAAGGTTAGCACGGTTGATAATATCAGCCCAAGTATTAATTACACGACCTTGACTATCA 40694 Query 40644 ACTACTGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATG 40703 ||||| || ||||| || || |||||||| | ||| ||||||||||| ||||| | Sbjct 40695 ACTACGGATTGGTTGAAATTGAAACCATTTAAGTTGAAAGCCATAGTGCTAATACCTAAA 40754 Query 40704 GAGGTAAGCCATATGCCAATAACCGGGAAAGCACCAAGAAAGAAGTGTAGCGCACGGCTA 40763 | ||| | ||| || || || || || ||||| | || |||||||||| | ||| Sbjct 40755 GCGGTGAACCAGATACCTATTACAGGCCAAGCAGCTAGGAAGAAGTGTAATGAACGAGAG 40814 Query 40764 TTGTTGAATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATG 40823 |||||||| ||||||||| || || | || ||||| ||||| || || |||||||| Sbjct 40815 TTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATA 40874 Query 40824 TTATAAGTCTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTG 40883 |||||||| || ||||| |||||||| || || || | || |||||| |||| || Sbjct 40875 TTATAAGTTTCCCCTTCTTGACCAAATTTGTAACCTTCATTAGCAGATTCATTTTCTGTA 40934 Query 40884 GTCTCCCGAATGA---TTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCA 40940 || |||| || | |||||| || ||||| || ||||||||| || | | Sbjct 40935 GTTTCCCTGATCAAACTTGAGGT--TACCAAGGAA-CCATGCATAGCACTGAATAGGGAG 40991 Query 40941 CCACCAAAGACGCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCT 41000 || || || || || || ||||| | |||||| ||||||||||| || |||||||| || Sbjct 40992 CCGCCGAATACACCCGCTACGCCTAACATATGAAATGGGTGCATAAGGATGTTGTGCTCA 41051 Query 41001 GCTTGGAAGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAG 41060 || ||||| |||| ||| |||||||| || ||| |||||||||||||||||| || || Sbjct 41052 GCCTGGAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAAAGGCATACCGTCCGAA 41111 Query 41061 AAAGAACCCTGACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCTGACAATGGAGCT 41120 || || ||||| | ||| |||| ||||| ||||| |||||||| | |||||| Sbjct 41112 AAGCTTCCTTGACCAATTGGGTAAATCAAGAAGACAGCGGTAGCTGCTGCAACAGGAGCT 41171 Query 41121 GTGTATGCCACAAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCTA 41180 | ||||| ||| ||||| || | |||||| | | | | ||||||||||| | Sbjct 41172 GAATATGCAACAGCAATCCAAGGGCGCATACCCAAACGGAAACTAAGTTCCCACTCACGG 41231 Query 41181 CCAGCGTATGCTGCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCG 41240 || ||| ||||| || | ||| ||||| | ||||| |||| ||| || |||||| Sbjct 41232 CCCATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCG 41291 Query 41241 TTGTATAGCCACTCGTCCAGTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATT 41300 ||||||| ||| || || | | | |||||||| |||||||| || || | || || Sbjct 41292 TTGTATAACCATTCATCAACGGATGCAGCTTCCCATATTGGGTAAAAGTGCAAACCTATA 41351 Query 41301 GCGTTAGAGCTCGGAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCCG 41360 ||| ||| | |||| | || ||||| ||||||||||| ||||| | ||| || || Sbjct 41352 GCGGCAGAAGTAGGAATAATGGCACCAGAAATAATATTGTTTCCGTAAAGTAAAGATCCA 41411 Query 41361 GAAACGGGCTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATG 41420 |||||||| ||||| || ||||| |||||||| || || || || || || ||||| || Sbjct 41412 GAAACGGGTTCACGAATACCATCAATATCTACTGGAGGGGCAGCAATGAAAGCGATAATA 41471 Query 41421 AA-ACATGTGGTAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGTA 41479 || ||| | || || || | ||| | || ||||| | ||||||||||| || | ||| Sbjct 41472 AATACA-GAAGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAATGTA 41530 Query 41480 TAGGCGGTTGTCGGTGCTAGTGACCCAGTTACAAAA 41515 || ||||| |||||||| || | ||||||||| || Sbjct 41531 AAGACGGTTTTCGGTGCTGGTTATCCAGTTACAGAA 41566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143303066478408