Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_021072.1 Length=178807 Score E Sequences producing significant alignments: (Bits) Value seq98 670 0.0 seq28 544 9e-150 seq258 87.8 2e-12 >seq98 Length=41871 Score = 670 bits (742), Expect = 0.0 Identities = 734/973 (75%), Gaps = 2/973 (0%) Strand=Plus/Plus Query 67834 TCAGCAGCAGCAAGGTCGAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATA 67893 ||| ||||||| ||||| |||||||||||||| || ||||| |||||||||||||||||| Sbjct 40575 TCAACAGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAACTTCCATA 40634 Query 67894 CCCAAACCAGCGCGGTTGAGAACGTCTGCCCAGGTAGGCAGAACCTTACCAGAACTATCA 67953 || | ||| ||||||| || || ||||| ||| | || ||| ||||||| Sbjct 40635 CCAAGGTTAGCACGGTTGATAATATCAGCCCAAGTATTAATTACACGACCTTGACTATCA 40694 Query 67954 AGGATAGACTGGTTGAAGTTGAAACCATTCAGGTTGAATGCCATGGTGCTAACACCAAGT 68013 | | || |||||||| ||||||||||| | |||||| ||||| ||||||| ||| | Sbjct 40695 ACTACGGATTGGTTGAAATTGAAACCATTTAAGTTGAAAGCCATAGTGCTAATACCTAAA 40754 Query 68014 GCAGTGAACCAGATACCAACGACAGGCCATGCAGCAAGGAAGAAGTGCAGCGAACGGGAG 68073 || |||||||||||||| | |||||||| ||||| ||||||||||| | ||||| ||| Sbjct 40755 GCGGTGAACCAGATACCTATTACAGGCCAAGCAGCTAGGAAGAAGTGTAATGAACGAGAG 40814 Query 68074 TTGTTGAACGATGCATACTGGAAGATCAGACGACCGAAGTATCCATGTGCAGCAACAATG 68133 |||||||| ||||| |||||||||| || || || || ||||| || || || || Sbjct 40815 TTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATA 40874 Query 68134 TTGTAAGTCTCTTCTTCTTGACCGAACTTGTAACCATAGTTCTGGGACTCAGTTTCAGTG 68193 || ||||| || |||||||||| || |||||||| | || || ||| |||| || Sbjct 40875 TTATAAGTTTCCCCTTCTTGACCAAATTTGTAACCTTCATTAGCAGATTCATTTTCTGTA 40934 Query 68194 GTTTCACGAACCAGTGAAGAAGTAACCAGGGAACCATGCATTGCACTGAACAGAGATCCA 68253 ||||| | | || || || |||| |||||||||||| |||||||| || || || Sbjct 40935 GTTTCCCTGATCAAACTTGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCG 40994 Query 68254 CCAAATACGCCAGCAACGCCGAGCATATGGAAGGGGTGCATCAGGATGTTGTGCTCTGCT 68313 || ||||| || || ||||| | |||||| || |||||||| |||||||||||||| || Sbjct 40995 CCGAATACACCCGCTACGCCTAACATATGAAATGGGTGCATAAGGATGTTGTGCTCAGCC 41054 Query 68314 TGGAACACCAGCATGTAGTTGAAAGTACCAGAAATGCCGAGAGGCATTGCGTCAGAGAAC 68373 ||||| || | ||| |||||||||||||||| || || | |||||| |||| || || Sbjct 41055 TGGAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAAAGGCATACCGTCCGAAAAG 41114 Query 68374 GAACCTTGACCGAAAGGATAGACCAGGAAGACTGCGGATGCTGCTGCAACAGGTGCAGAG 68433 |||||||| | || || | || |||||| |||| |||||||||||||| || || Sbjct 41115 CTTCCTTGACCAATTGGGTAAATCAAGAAGACAGCGGTAGCTGCTGCAACAGGAGCTGAA 41174 Query 68434 TATGCAACACAGATCCAAGGACGCATACCAAGACGATAGGAAAGTTCCCATTCACGTCCC 68493 ||||||||| |||||||| |||||||| | ||| | ||||||||| ||||| ||| Sbjct 41175 TATGCAACAGCAATCCAAGGGCGCATACCCAAACGGAAACTAAGTTCCCACTCACGGCCC 41234 Query 68494 ATGTATGCAAAGATACCAATCAGGAAGTGAAAGATTACGAGTTGGAAAGGACCACCATTG 68553 ||||| | | ||||| | |||||| | | | |||| ||||||| || ||| Sbjct 41235 ATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTTG 41294 Query 68554 TACAACCACTCATCAAGGGTTGCTGCTTCCCAAATGGGATAAAAGTGAAGACCAATTGCA 68613 || ||||| ||||||| || ||| |||||||| || || |||||||| | ||| || || Sbjct 41295 TATAACCATTCATCAACGGATGCAGCTTCCCATATTGGGTAAAAGTGCAAACCTATAGCG 41354 Query 68614 TTTGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCATACAGAAGTGAACCAGCA 68673 ||| |||||| || ||||||||||| || ||||| || || || | || |||| | Sbjct 41355 GCAGAAGTAGGAATAATGGCACCAGAAATAATATTGTTTCCGTAAAGTAAAGATCCAGAA 41414 Query 68674 ACAGGTTCACGAATACCATCGATGTCCACAGGGGGAGCAGCGATGAAGGCGACGATGAA- 68732 || ||||||||||||||||| || || || || || ||||| ||||| |||| || || Sbjct 41415 ACGGGTTCACGAATACCATCAATATCTACTGGAGGGGCAGCAATGAAAGCGATAATAAAT 41474 Query 68733 ACAGATGGTTGCTGCAAGCAGCGTAGGGATCATCAGGACGCCGAACCAACCAACGTAAAG 68792 ||||| ||||| | | | ||||||||||||| || || ||||| |||| |||||| Sbjct 41475 ACAGA-AGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAG 41533 Query 68793 GCGGTTCTCTGTG 68805 ||||| || ||| Sbjct 41534 ACGGTTTTCGGTG 41546 >seq28 Length=37419 Score = 544 bits (602), Expect = 9e-150 Identities = 729/1011 (72%), Gaps = 10/1011 (1%) Strand=Plus/Plus Query 66586 ATTAAAGTGCATTACCACGGGGCAGAACTTCTTCTGGGAATACAAAGTTTTCATGCGGTT 66645 ||||||| || || |||||||| ||||| || || ||||||| || ||||||||| || | Sbjct 30312 ATTAAAGAGCGTTTCCACGGGGTAGAACCTCCTCGGGGAATATAAGGTTTTCATGAGGCT 30371 Query 66646 GATCGATAGGTGCCAACCATGCACGAAGACCTTCATTCAATAGAATGTTCTTTGTGTAGA 66705 |||| || |||| ||| ||||||| |||||||| || ||||| || || || |||| Sbjct 30372 GATCTTGAGCCGCCATCCAAGCACGAATGCCTTCATTTAAAAGAATATTTTTGGTATAGA 30431 Query 66706 ACGTCTCGAACTCTGGGTCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCAC 66765 | ||||| || || || ||||| ||||| | ||| || || || || |||||||| |||| Sbjct 30432 AAGTCTCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGAGAAACGAAGTCATAGGCAC 30491 Query 66766 GAAGGTTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCAAAGACCCATAACAGGAA 66825 | ||||| ||||| ||||| | | || | | || |||| | ||| | || || | Sbjct 30492 GCAGGTTCAGAGCCAGACCTACTACTCCAAGAGCGCTCATCCATAAACCAGTTACTGGTA 30551 Query 66826 CAAACAACATAAAGAAATGCAACCACCTCTTATTGCTAAACGCAATACCAAAGATCTGAG 66885 |||| |||||||||||||| ||||| | |||||| ||| |||| |||||||| || | Sbjct 30552 CAAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGGG 30611 Query 66886 ACCAGAAGCGGTTTGCAGTAACCATTGAGTAAGTTTCTTCCTCTTGAGTAGAGTCGAATG 66945 |||| |||||||| || || |||||||| ||||||||||| ||||||| | || || | Sbjct 30612 ACCAAAAGCGGTTGGCGGTGACCATTGAATAAGTTTCTTCGGCTTGAGTTGGGTTAAAAG 30671 Query 66946 CTTTGAAAGTGTTTGCTTGTTCACCATCTTCATACAGAGTATTCTCTACTGTAACACCAT 67005 | ||| || ||||| ||||| |||||| | | |||||| || || ||| |||||| Sbjct 30672 CGCGGAATGTATTTGCACCATCACCGTCTTCAAATAAAGTATTTTCGACAGTAGCACCAT 30731 Query 67006 GAATGGCAGAAAGCAATGCACCACCCAGGATACCTGCTACACCCATCATATGAAACGGGT 67065 |||| || | |||| || | |||| | ||| || || ||||||||||||||||||| Sbjct 30732 GAATAGCGCACAGCAGAGCCGCGCCCAATACACCAGCAACTCCCATCATATGAAACGGGT 30791 Query 67066 TCAAGGTCCAGTTATGGAATCCTTGTAGGAAGAGAAGGAATCGAAAGATTGCTGAGACCC 67125 ||| ||||| ||||| || ||||| | || || | ||||||||| || |||| || | Sbjct 30792 TCAGTGTCCAATTATGAAACCCTTGGAAAAACAGGATGAATCGAAATATAGCTGCTACAC 30851 Query 67126 CGAAAGATGGAGCGAAAAACCAACTCGATTGACCCAGAGGGTAGATGAGAAAGACACTAA 67185 | ||| || || || ||||||| |||||||| || || || || || || ||| || Sbjct 30852 CAAAACTAGGTGCAAAGAACCAACCGGATTGACCTAGCGGATAAATCAGGAATACAGAAA 30911 Query 67186 CAAAAACAGCGATAGGACCAGAGAACGCAATAGCATTGTAGGGACGGA----TACCGATG 67241 |||||||||| || |||||||| || || || ||||| || || || | || ||| Sbjct 30912 CAAAAACAGCAATTGGACCAGAAAATGCGATTGCATTATAAGGTCGCAATTGCACGGAT- 30970 Query 67242 AGACGTGCCAGTTCAAACTGGCGAAGCATGAAACCAATTAGAGCGAAAGCCCCGTGGAGC 67301 || || | |||||| || || | ||| ||||| ||||| ||||||| |||||||| Sbjct 30971 ---CGAGCAATTTCAAATTGACGTAACATAAAACCTATTAGTCCGAAAGCTCCGTGGAGA 31027 Query 67302 GCCACAAAATTCCAGAGTCCTCCAAGTTGGATCCAGCGGACGAAATCCCCCTGAGACTCA 67361 || |||||| |||| || || || | ||| ||| || |||||||| || | ||| Sbjct 31028 GCAACAAAAGTCCACAGACCACCTAATTGACACCAACGAGTAAAATCCCCTTGCGCTTCA 31087 Query 67362 GGACCCCAAAGTAGAAGAAGAGAATGACCCATAGCATCAGCAGGCGTTGACACAGCCGCT 67421 |||||||| |||| | | |||||| | | | || |||||| || || || || || Sbjct 31088 GGACCCCATAGTAACAACAAAGAATGTGCTAAACTATTAGCAGGGGTAGAAACTGCAGCG 31147 Query 67422 GTGAGAAAATTAGCA-CCCTCAAGATAACTAGACGCGAGTCCGTGAGTGTACCAGCTTGT 67480 || | | || | ||| || || | ||| || | ||| || || |||||| || Sbjct 31148 GTTA-AGAAGTTGCAGCCTTCCAAATAGGAGCTGGCCAATCCATGGGTATACCAGGAGGT 31206 Query 67481 GACAAACGTAGTACCAGTAAGCCAGCCACCAATTGCCATATAAGCAGTGGGAAAAAGAAG 67540 ||||| || ||||| || | ||| || || | || | || ||| ||||| || | Sbjct 31207 TACAAAAGTTGTACCTGTGAACCAACCCCCTAAAGCAAAGTAGGCACAAGGAAAGAGCAA 31266 Query 67541 TAGTCCAGACCAACCCACAAAGACAAAGCGATCTCGTTTAAGCCAGTCATC 67591 ||| || |||||||| || || ||||| || || | | ||||||||| Sbjct 31267 TAGACCGGACCAACCTACGAAAACAAAACGGTCCCTCCGCAACCAGTCATC 31317 >seq258 Length=11790 Score = 87.8 bits (96), Expect = 2e-12 Identities = 69/82 (84%), Gaps = 2/82 (2%) Strand=Plus/Minus Query 35501 AATCATATAACTCCCCAGGTAGGATTTGAACCTACGACCAATCGATTAACAGTCGATAGC 35560 ||||| || ||||||| |||||||| ||||||||||||| || ||||||| ||| || Sbjct 4922 AATCAAAT--CTCCCCAAGTAGGATTCGAACCTACGACCAGTCAGTTAACAGCCGACCGC 4865 Query 35561 TCTGCCGCTGAGCTACTGAGGA 35582 ||| || ||||||||||||||| Sbjct 4864 TCTACCACTGAGCTACTGAGGA 4843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570381055071840