Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq76495 122 1e-22 seq143273 95.1 2e-14 seq215049 89.7 8e-13 seq30058 84.2 3e-11 >seq76495 Length=1287 Score = 122 bits (134), Expect = 1e-22 Identities = 121/157 (77%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||||| |||||| |||| || ||||||| ||||| ||||| || || || || || Sbjct 425 AATGCAGATATTTGTTAAGACGCTGACTGGGAAAACCATTACCTTGGAGGTGGAGAGCTC 484 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 ||||| |||| || |||||| |||||| ||||| || |||||||| || ||||| || Sbjct 485 TGATACTATTGATAATGTGAAAGCTAAAATCCAAGACAAGGAAGGCATTCCCCCAGACCA 544 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 || || ||||| | ||| ||||||||||| || ||| Sbjct 545 GCAGAGGTTGATCTTTGCTGGTAAGCAGCTGGAGGAT 581 >seq143273 Length=304 Score = 95.1 bits (104), Expect = 2e-14 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||||| || ||| | || || ||||||| ||||| ||||| || || || ||| || Sbjct 85 AATGCAGATCTTTGTGAAGACTCTGACTGGTAAAACCATTACGTTGGAGGTTGAAAGCTC 144 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 |||| |||| || ||||| ||||| ||||| || ||||| || || || || || Sbjct 145 GGATACTATTGATAATGTGAAGGCCAAAATCCAAGACAAGGAAGGTATTCCCCCGGACCA 204 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 |||||| |||| | || ||||||||||| || ||| Sbjct 205 GCAAAGACTGATCTTCGCTGGTAAGCAGCTAGAGGAT 241 >seq215049 Length=488 Score = 89.7 bits (98), Expect = 8e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| | || || | || |||||||||||||| || || || || ||| Sbjct 218 ATGCAAATTTTTGTGAAGACCCTCACGGGAAAAACTATTACGTTGGAGGTTGAGAGTTCA 159 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || ||||| || || || ||||| || ||||| || ||||| ||| Sbjct 158 GATACAATTGATAATGTGAAGGCAAAGATCCAGGATAAGGAGGGCATTCCACCAGATCAA 99 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 |||||| | || | ||| || ||||| || || ||| | | || | | || || ||| Sbjct 98 CAAAGACTTATCTTTGCTGGGAAGCAACTTGAGGATGGCCGCACACTTGCGGACTACAAT 39 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGT 156031 || || ||| | || || ||||| || Sbjct 38 ATTCAGAAGGAGTCTACTCTCCATTTGGT 10 >seq30058 Length=4835 Score = 84.2 bits (92), Expect = 3e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||||||| | ||||| | || ||||| ||||| || | ||||| ||| ||| Sbjct 162 ATGCAAATATTTGTGAAAACTCTTACCGGAAAGACTATAACCCTTGAAGTGGAAAGTTCC 103 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || || || ||| || || || || || || || || ||||| ||| Sbjct 102 GACACCATTGACAATGTAAAGGCTAAGATCCAGGACAAGGAGGGTATTCCCCCAGATCAA 43 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 ||||| | || | |||||| ||||| || |||||| Sbjct 42 CAAAGGCTCATCTTTGCCGGCAAGCAACTTGAAGAT 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729731164619200