Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq76495 111 3e-19 seq143273 91.5 3e-13 >seq76495 Length=1287 Score = 111 bits (122), Expect = 3e-19 Identities = 118/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || |||| || ||||||||||| || || ||||| ||||| || || || ||||| || Sbjct 580 TCCTCCAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTG 521 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 ||||| |||||| ||| |||||| |||||||| || || || || | |||||| Sbjct 520 TCTTGGATTTTAGCTTTCACATTATCAATAGTATCAGAGCTCTCCACCTCCAAGGTAATG 461 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||| ||||| | || |||| |||||||||||| Sbjct 460 GTTTTCCCAGTCAGCGTCTTAACAAATATCTGCATT 425 >seq143273 Length=304 Score = 91.5 bits (100), Expect = 3e-13 Identities = 130/183 (71%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || ||||| |||| | | ||| | || || | || |||||||| || || | ||| Sbjct 267 ATGTTATAGTCTGCCAGGGTACGTCCATCCTCTAGCTGCTTACCAGCGAAGATCAGTCTT 208 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 || ||||| || || || ||||| || ||||| ||||| || |||||| |||||| Sbjct 207 TGCTGGTCCGGGGGAATACCTTCCTTGTCTTGGATTTTGGCCTTCACATTATCAATAGTA 148 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 || || ||| || || | ||||||||||||||||| | || || | || |||||| Sbjct 147 TCCGAGCTTTCAACCTCCAACGTAATGGTTTTACCAGTCAGAGTCTTCACAAAGATCTGC 88 Query 172068 ATT 172070 ||| Sbjct 87 ATT 85 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 902488341429600