Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq32499 127 6e-24 seq123304 114 4e-20 seq88759 105 2e-17 seq108452 91.5 4e-13 seq57780 84.2 6e-11 >seq32499 Length=2956 Score = 127 bits (140), Expect = 6e-24 Identities = 262/383 (68%), Gaps = 9/383 (2%) Strand=Plus/Plus Query 288964 TGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCtt 289023 || |||||||| ||| | ||||||||| || | |||| ||| | || |||| Sbjct 1503 TGGTTAAGTGTGCTTTCACGTTCATCATTG---CCGCCTGAAAAACCACCACGGCCCCTT 1559 Query 289024 tttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCA 289083 | ||||| ||||| ||||| ||||| || | | || |||| | |||||| ||| Sbjct 1560 GATCGACCAATTGCATCTATTTCATCAATAAATACAATACTAGGAGCACATTGTCTTGCA 1619 Query 289084 ATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCA 289143 ||||| ||| || | ||| | ||||| |||||| ||||||| | ||| || Sbjct 1620 TCCTGGAATAAGCTTCTAACCCTGGAGGGTCCAACTCCAACAAACATTTCCATAAAATCC 1679 Query 289144 GAAGCGGATACTTGA-ATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAG 289202 ||| | || | | || | ||| | |||| | ||| ||||| |||| | || ||||| Sbjct 1680 GAACCAGACA-TAGACAGGAAGGGCACATCAGATTCACCTGCAGTTGCCTTAGCAAGAAG 1738 Query 289203 TGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC-CCCAG 289261 ||||| ||||| |||||||| || | | ||| | || || || | ||| || ||||| Sbjct 1739 AGTCTTCCCTGTGCCAGGTGGGCCTACAAGAAGAGCACCTTTGGGAATTTTAGCTCCCAG 1798 Query 289262 CAGACTTA-TATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTT 289320 | ||| ||||||| || |||| | || | ||||| ||| || ||| | ||| Sbjct 1799 CT--CTTCGTATTTCTTGGGATTCTTGAGGAAATGTACAAACTCCATAATTTCTTGCTTT 1856 Query 289321 GCCTCATCACATCCTGCTACATC 289343 ||||||||||| || |||||||| Sbjct 1857 GCCTCATCACAGCCAGCTACATC 1879 >seq123304 Length=1600 Score = 114 bits (126), Expect = 4e-20 Identities = 274/407 (67%), Gaps = 7/407 (2%) Strand=Plus/Plus Query 288939 aaaTCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACC 288998 ||| |||||||| | || | ||||||||| || ||||| ||| ||||| ||| Sbjct 978 AAAGCCATCCATTTCTACTAGTAATTGATTAAGGGTACTTTCCCGTTCGTCATTGCCACC 1037 Query 288999 TCTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAAT 289058 | ||||| || | || ||| | |||||| |||||||| || ||||| ||||| Sbjct 1038 TGA-GAATCCTCC--ACGGCCTCTTGCTCTACCAATTGCATCAATCTCATCAATAAAAAT 1094 Query 289059 CACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAG 289118 | || |||| | || || || | ||| || | ||| ||||| |||| ||||| Sbjct 1095 AATACTAGGAGCACACTGCCTTGCTTCTTGAAACAAGTTTCTGACACGTGATGGTCCAAC 1154 Query 289119 ACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAAT-GTTACATTTGCTT 289177 ||||||| |||| || | || || ||| | |||| | || ||| | ||| | | Sbjct 1155 ACCAACAAACATCTCCATGAAATCTGAACCAGATA-TGGATAGAAAAGGCACAGCAGACT 1213 Query 289178 CGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAA 289237 | || || |||| | |||| ||| ||||| || |||||||| || || | || || Sbjct 1214 CCCCAGCAGTTGCCTTTGCCAAAAGGGTCTTTCCAGTTCCAGGAGGGCCTACCAAAAGGG 1273 Query 289238 CTCCCTTTGGTACTTTTGC-CCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCT 289296 | || || || | |||||| |||| | || ||| || | |||| |||| | || | Sbjct 1274 CACCTTTGGGAATTTTTGCTCCCAACTC-CTCATACTTTTTAGGGTTCTTGAGGAAGTGC 1332 Query 289297 ACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343 |||| ||| | ||| | || |||||||||||||| || ||||| Sbjct 1333 ACAAACTCCATGATTTCTTGCTTCGCCTCATCACATCCAGCGACATC 1379 >seq88759 Length=3029 Score = 105 bits (116), Expect = 2e-17 Identities = 167/236 (71%), Gaps = 5/236 (2%) Strand=Plus/Minus Query 156033 AGATACATAGCAAAACTACCATTCCTCTTGCCACCC---TGATCTACATACCGAGCAGTC 156089 ||| ||| | ||||| |||| |||||||| ||||| ||||| ||||| || || || Sbjct 1271 AGACACAAA-CAAAA-TACCTTTCCTCTTTCCACCTCCTTGATCCACATATCGTGCTGTA 1214 Query 156090 TTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATA 156149 | ||| || |||| || ||| |||| ||| |||||||| || ||||||||||| |||||| Sbjct 1213 TCATTAAACACACGTAACATTGGAACAATTCCATTGGATGTTCCATTGGTTCCACGAATA 1154 Query 156150 TGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAA 156209 | |||| | || | |||||||| | | ||||| || || | |||| Sbjct 1153 TAACTGCCAGTAGCACGGATATTATGAACAGAAACACCAATTCCTCCAGCAGATTTGCTG 1094 Query 156210 ATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT 156265 || ||| || ||||| | |||| | || ||||||||| |||||||| ||| Sbjct 1093 ATAACAGCACACTCCTTCAAGGTATCATATATTCCTTCAATACTATCATCTTTCAT 1038 >seq108452 Length=755 Score = 91.5 bits (100), Expect = 4e-13 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 251424 ACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGA 251483 ||| ||||| || || || |||||| | |||| | |||| | || |||| | | Sbjct 516 ACAAACATGTACCCTATATGCATCACTTTGGTCAAACAGCCTCTCTTTCAGGAAGTGTGC 575 Query 251484 TGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCG 251543 ||||| |||| |||||| ||||| || ||||||||||| || ||||| |||||||| || Sbjct 576 AGCACCATGTGCAATCATGCAATCTCGTTCCATTTCACCAAAGCGAAGCCCACCATCACG 635 Query 251544 AGCCCTACCCTCGGCAGGCTGACGAGTGAG 251573 | || || || |||||||| | ||| || Sbjct 636 TGACCGCCCTTCAGCAGGCTGTCTAGTCAG 665 >seq57780 Length=6884 Score = 84.2 bits (92), Expect = 6e-11 Identities = 151/220 (69%), Gaps = 3/220 (1%) Strand=Plus/Minus Query 156049 TACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTA 156105 |||| ||||||||| || || ||||| ||||| |||||||| ||||| || || | | Sbjct 1226 TACCTTTCCTCTTGCCTCCTCCTTGATCAACATAACGAGCAGTGTTATTAAACACTCGAA 1167 Query 156106 GCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGC 156165 |||| || | ||| |||| ||||| ||||| || || | ||||| |||| | | Sbjct 1166 GCATGGGGACAATGCCATGTGAAGTCCCATTTGTACCACCAATATAACTGCCAGTGGCAC 1107 Query 156166 GAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCT 156225 | | ||| || || || || || || || | |||| || ||| |||||| Sbjct 1106 GGATATTGTGGATGGAAAGACCTATTCCTCCGGCTGATTTGCTTATAACAGCACATTCCC 1047 Query 156226 TTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT 156265 | | ||||| | || ||||||||| |||||||| ||| Sbjct 1046 TCAAAGTATCATAGATTCCTTCAATACTATCATCTTTCAT 1007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1467404680566044