Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_021536.1 Length=171797 Score E Sequences producing significant alignments: (Bits) Value seq98 616 2e-171 seq28 607 9e-169 >seq98 Length=41871 Score = 616 bits (682), Expect = 2e-171 Identities = 734/993 (74%), Gaps = 2/993 (0%) Strand=Plus/Minus Query 150839 TTTTGTGACTGGGTTACCTCTACTAACAACCGTCTGTATGTCGGTTGGTTCGGTGTGCTG 150898 || ||| ||||| | ||| || | |||||||| || | || ||||| ||||| || Sbjct 41566 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 41507 Query 150899 ATGATTCCAACTCTGTTGGCAGCAACCATTTGCTTCATCGTGGCATTCATCGCTGCTCCC 150958 ||||| || ||| | ||| | ||||| | || || | || ||||| ||||| || Sbjct 41506 ATGATCCCTACTTTATTGACCGCAACTTCTGTATTTATTATCGCTTTCATTGCTGCCCCT 41447 Query 150959 CCTGTGGACATCGATGGCATCCGTGAACCCGTTGCTGGTTCTCTGATGTACGGTAACAAC 151018 || || || || ||||| || |||||||||||| |||| ||| | | ||||| ||||| Sbjct 41446 CCAGTAGATATTGATGGTATTCGTGAACCCGTTTCTGGATCTTTACTTTACGGAAACAAT 41387 Query 151019 ATCATCTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATCGGTCTGCACTTCTATCCCATC 151078 || || |||||||| || ||||| ||||| |||||| ||| ||||||| || || || Sbjct 41386 ATTATTTCTGGTGCCATTATTCCTACTTCTGCCGCTATAGGTTTGCACTTTTACCCAATA 41327 Query 151079 TGGGAAGCAGCCTCTCTCGATGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTGTC 151138 |||||||| || || | ||||||||| | |||||||| ||||||| |||| |||| Sbjct 41326 TGGGAAGCTGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGTT 41267 Query 151139 TTCCACTTCCTGATTGGTATCTATGCTTACATGGGTCGTGAGTGGGAACTGTCTTACCGC 151198 | |||||| | ||||| | | ||||||||| |||||||||||||| || ||| Sbjct 41266 CTACACTTCTTACTTGGTGTAGCTTGTTACATGGGCCGTGAGTGGGAACTTAGTTTCCGT 41207 Query 151199 TTGGGTATGCGTCCCTGGATCTGC-GTTGCATACTCTGCTCCAGTTGCTGCTGCGAGTGC 151257 ||||||||||| || ||||| ||| |||||||| || ||||| ||||| || || | || Sbjct 41206 TTGGGTATGCGCCCTTGGAT-TGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCTACCGC 41148 Query 151258 AGTGTTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCCCTGGGTAT 151317 || ||| | | || || | |||||||| || || || | ||||| | || || Sbjct 41147 TGTCTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCGGACGGTATGCCTTTAGGAAT 41088 Query 151318 TTCTGGCACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTGATGCACCC 151377 ||||| || ||||||| ||| |||| ||||| || ||||||||||| || |||||||| Sbjct 41087 CTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCC 41028 Query 151378 CTTCCATATGCTTGGTGTGGCTGGTGTCTTCGGTGGATCGCTCTTCTCGGCAATGCACGG 151437 || |||||| | || || || ||||| ||||| || || || ||| || ||||| || Sbjct 41027 ATTTCATATGTTAGGCGTAGCGGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG 40968 Query 151438 TTCTCTGGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAACGAGTCCCAGAACTATGG 151497 ||| |||| || || || | | || || || ||||| || || || | || Sbjct 40967 TTCCTTGGTAACCTCAAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAGG 40908 Query 151498 TTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCACACGGTTACTTTGG 151557 |||||| || |||||||||| || || || || ||||| ||||| || ||||| ||||| Sbjct 40907 TTACAAATTTGGTCAAGAAGGGGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGG 40848 Query 151558 TCGTCTCATCTTCCAATACGCTTCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTCGC 151617 || | ||||||||||| ||| |||||||| || ||||| | ||||||||||| || Sbjct 40847 CCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCATTACACTTCTTCCTAGC 40788 Query 151618 AGCATGGCCTGTTGTCGGTATCTGGTTCACTGCACTTGGTGTCAGCACCATGGCATTCAA 151677 || |||||||| | |||||||||||||| || | ||| | ||||| ||||| ||||| Sbjct 40787 TGCTTGGCCTGTAATAGGTATCTGGTTCACCGCTTTAGGTATTAGCACTATGGCTTTCAA 40728 Query 151678 CCTGAACGGTTTCAACTTCAACCAGTCCATCATGGATGGTCAGGGCAAAGTCCTGAACAC 151737 | | || |||||||| |||||||| ||| | | ||| |||| || || | || || Sbjct 40727 CTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAATAC 40668 Query 151738 CTGGGCAGACGTTCTGAACCGTGCAGGTCTGGGTATGGAAGTTATGCACGAGCGTAATGC 151797 ||||| || || | |||||||| || ||||||||||||||||| || |||||||| Sbjct 40667 TTGGGCTGATATTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGC 40608 Query 151798 TCACAACTTCCCTCTCGACCTTGCTGCTGCTGA 151830 ||||||||||||||| ||||| ||||||| ||| Sbjct 40607 TCACAACTTCCCTCTAGACCTAGCTGCTGTTGA 40575 >seq28 Length=37419 Score = 607 bits (672), Expect = 9e-169 Identities = 745/1017 (73%), Gaps = 8/1017 (1%) Strand=Plus/Minus Query 152359 TTTGATGTCCTGGATGACTGGCTTAAGAGAGACCGTTTCGTTTTTGTTGGTTGGTCTGGA 152418 |||||| | ||||||||||| | ||| |||||||| ||||| || |||||||| || Sbjct 31329 TTTGATATTATGGATGACTGGTTGCGGAGGGACCGTTTTGTTTTCGTAGGTTGGTCCGGT 31270 Query 152419 CTTCTTCTTTTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACTTTC 152478 || | || ||||| ||| || ||||| | || |||||| | || || || ||||| Sbjct 31269 CTATTGCTCTTTCCTTGTGCCTACTTTGCTTTAGGGGGTTGGTTCACAGGTACAACTTTT 31210 Query 152479 GCGACGAGTTGGTATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGCGCAAACTTTCTT 152538 | || |||||||| || || ||||| || |||||| |||| ||| ||||| | Sbjct 31209 GTAACCTCCTGGTATACCCATGGATTGGCCAGCTCCTATTTGGAAGGCTGCAACTTCTTA 31150 Query 152539 ACTGCGGCAGTTTCTACTCCAGCAGATGCTATGGGTCATTCTCTTCTGCTTCTCTGGGGT 152598 || || ||||||||||| || || || | | | |||||| | || | || |||||| Sbjct 31149 ACCGCTGCAGTTTCTACCCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGT 31090 Query 152599 CCTGAGGCTCAAGGGGATTTCGTCAGATGGATTCAGCTCGGAGGACTCTGGGCTTTTGTG 152658 ||||| || ||||||||||| | ||| ||| | || || || ||| ||||||| Sbjct 31089 CCTGAAGCGCAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTT 31030 Query 152659 GCGCTCCACGGGGCTTTCGCTCTAATCGGTTTCATGCTTCGCCAGTTTGAACTGGCACGT 152718 || |||||||| ||||||| ||||| ||||| ||| | || || |||||| | || || Sbjct 31029 GCTCTCCACGGAGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAAATTGCTCG- 30971 Query 152719 CTCATCGGTA----TCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTT 152774 ||| || | || || || ||||| || || || |||||||| || |||||||| Sbjct 30970 ---ATCCGTGCAATTGCGACCTTATAATGCAATCGCATTTTCTGGTCCAATTGCTGTTTT 30914 Query 152775 TGTTAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTT 152834 |||| || || || || || || || |||||||| ||||||| || || || ||| Sbjct 30913 TGTTTCTGTATTCCTGATTTATCCGCTAGGTCAATCCGGTTGGTTCTTTGCACCTAGTTT 30854 Query 152835 CGGGGTCGCAGCAATCTTCCGATTCCTTCTCTTCCTTCAAGGATTCCACAACTGGACATT 152894 || || ||||| || || |||||| | || || | ||||| || || || |||||| | Sbjct 30853 TGGTGTAGCAGCTATATTTCGATTCATCCTGTTTTTCCAAGGGTTTCATAATTGGACACT 30794 Query 152895 GAATCCGTTTCATATGATGGGTGTTGCAGGTATTTTGGGAGGGGCCTTGCTTTCTGCCAT 152954 ||| ||||||||||||||||| ||||| ||| | ||||| | ||| |||| | || || Sbjct 30793 GAACCCGTTTCATATGATGGGAGTTGCTGGTGTATTGGGCGCGGCTCTGCTGTGCGCTAT 30734 Query 152955 TCATGGTGTTACAGTAGAGAATACTTTGTATCAAGATGGTGAACAAGCAAACACTTTCAA 153014 |||||||| ||| || || |||||||| | | |||| ||||| ||||| || ||| Sbjct 30733 TCATGGTGCTACTGTCGAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTCCG 30674 Query 153015 AGCTTTCGACAGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTG 153074 ||||| || ||||||| ||||| || ||||| ||||| || || ||||| || || Sbjct 30673 CGCTTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCCAACCGCTTTTG 30614 Query 153075 GTCCCAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTT 153134 |||||| || ||||| |||||||| ||||||||| ||| | |||||||||||| | || Sbjct 30613 GTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATT 30554 Query 153135 TGTACCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATCT 153194 |||||| || | ||| | |||| || ||||| | | ||||| ||||| || || Sbjct 30553 TGTACCAGTAACTGGTTTATGGATGAGCGCTCTTGGAGTAGTAGGTCTGGCTCTGAACCT 30494 Query 153195 TCGTGCTTACGATTTTGTATCTCAAGAAATCAGGGCGTCAGAAGATCCTGAATTTGAGAC 153254 ||||| || || || || ||||| |||||| | || | |||||||||||||||||||| Sbjct 30493 GCGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGAC 30434 Query 153255 GTTCTATACGAAGAATATCCTTTTGAACGAAGGTCTTCGTGCTTGGTTGGCACCTGTTGA 153314 |||||||| || ||||| ||||| || ||||| ||||||||||| |||| || || Sbjct 30433 TTTCTATACCAAAAATATTCTTTTAAATGAAGGCATTCGTGCTTGGATGGCGGCTCAAGA 30374 Query 153315 CCAACCTCATGAGAACTTCGTGTTCCCTGAAGAGGTATTGCCACGAGGCAACGCTCT 153371 || |||||||| ||| | | ||||| || ||||| | || || || |||||||| Sbjct 30373 TCAGCCTCATGAAAACCTTATATTCCCCGAGGAGGTTCTACCCCGTGGAAACGCTCT 30317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548014672036640