Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_021559.1 Length=179063 Score E Sequences producing significant alignments: (Bits) Value seq98 509 2e-139 seq28 349 4e-91 >seq98 Length=41871 Score = 509 bits (564), Expect = 2e-139 Identities = 708/992 (71%), Gaps = 0/992 (0%) Strand=Plus/Minus Query 72235 TTTTGTGAGTGGGTAACATCCACTGACAATCGCATCTACGTTGGTTGGTTTGGTGTCTTA 72294 || ||| | ||| |||| ||| || || || | ||| |||| ||||||||||| || Sbjct 41566 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 41507 Query 72295 ATGATCCCATGTCTTCTAACTGCTGCTGCTTGTTTCATTGTAGCATTCATCGCTGCTCCT 72354 |||||||| | | | || || || || || ||| | || ||||| ||||| ||| Sbjct 41506 ATGATCCCTACTTTATTGACCGCAACTTCTGTATTTATTATCGCTTTCATTGCTGCCCCT 41447 Query 72355 CCAGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAAC 72414 ||||| ||||| || || || | ||||| ||| | || ||||| | || || ||||| Sbjct 41446 CCAGTAGATATTGATGGTATTCGTGAACCCGTTTCTGGATCTTTACTTTACGGAAACAAT 41387 Query 72415 ATCATCTCTGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTACACTTCTATCCCATC 72474 || || |||||||| | |||| |||| ||| ||||| || ||||| || || || Sbjct 41386 ATTATTTCTGGTGCCATTATTCCTACTTCTGCCGCTATAGGTTTGCACTTTTACCCAATA 41327 Query 72475 TGGGAAGCAGCCACTATGGACGAGTGGTTGTATAACGGAGGTCCTTACCAGTTAGTTATT 72534 |||||||| || | | || || ||||| || ||||| |||||||| | || || || Sbjct 41326 TGGGAAGCTGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGTT 41267 Query 72535 TTCCACTTCCTTATTGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACAGA 72594 | |||||| | |||| | || |||||||| | |||||||||| | | | Sbjct 41266 CTACACTTCTTACTTGGTGTAGCTTGTTACATGGGCCGTGAGTGGGAACTTAGTTTCCGT 41207 Query 72595 CTAGGAATGAGACCTTGGATATGTGTAGCATACTCAGCACCTGTATCTGCAGCATTTGCA 72654 | || ||| | |||||||| ||| ||||| ||||| ||||| | ||||| || Sbjct 41206 TTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCTACCGCT 41147 Query 72655 GTATTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATC 72714 || ||| | | || ||| | ||||| || || || || |||||||| |||| ||| Sbjct 41146 GTCTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCGGACGGTATGCCTTTAGGAATC 41087 Query 72715 TCAGGTACGTTCAACTTCATGTTCGTGTTCCAAGCAGAACACAACATACTAATGCACCCC 72774 || ||||| |||||||| ||| | || ||||| || || |||||||| || |||||||| Sbjct 41086 TCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCA 41027 Query 72775 TTCCATATGGCAGGTGTAGCAGGTATGTTCGGTGGTAGTCTCTTCAGTGCAATGCACGGT 72834 || |||||| ||| ||||| ||| | ||||| || || |||||||| ||||| ||| Sbjct 41026 TTTCATATGTTAGGCGTAGCGGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGT 40967 Query 72835 TCACTTGTTACTTCATCTCTAATCAGAGAGACAACAGAGAACGAGAGTCAAAACTACGGC 72894 || | || || ||| | | ||||| || || ||||| || || | || | || Sbjct 40966 TCCTTGGTAACCTCAAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAGGT 40907 Query 72895 TATAAGTTCGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGATACTTCGGT 72954 || || || || ||||||| ||||| ||||| || || || |||||||| || || || Sbjct 40906 TACAAATTTGGTCAAGAAGGGGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGGC 40847 Query 72955 AGATTAATCTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTTCTTCCTCGCT 73014 |||| |||||||| ||||| |||||||||||||||||||||||||||||||| ||| Sbjct 40846 CGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCATTACACTTCTTCCTAGCT 40787 Query 73015 GTATTCCCTGTAGTCTGTGTATGGTTAACCTCAATGGGTATCTGTACAATGGCATTCAAC 73074 | | |||||| | || | ||||| ||| | | ||||| | || ||||| |||||| Sbjct 40786 GCTTGGCCTGTAATAGGTATCTGGTTCACCGCTTTAGGTATTAGCACTATGGCTTTCAAC 40727 Query 73075 CTTAACGGATTCAACTTCAACCAATCAGTTGTAGATGCAAACGGAAAGATTGTACCAACA 73134 | || || ||||| ||||||||||| || || ||| | || | | || Sbjct 40726 TTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAATACT 40667 Query 73135 TGGGGAGATGTTCTTAACAGAGCAAACCTTGGAATGGAAGTTATGCATGAAAGAAATGCA 73194 |||| ||| || | ||| | || |||||||| |||||||||||||||||| | ||||| Sbjct 40666 TGGGCTGATATTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCT 40607 Query 73195 CACAACTTCCCACTAGACCTAGCATCTGCTGA 73226 ||||||||||| ||||||||||| ||| ||| Sbjct 40606 CACAACTTCCCTCTAGACCTAGCTGCTGTTGA 40575 >seq28 Length=37419 Score = 349 bits (386), Expect = 4e-91 Identities = 700/1038 (67%), Gaps = 21/1038 (2%) Strand=Plus/Minus Query 73364 TTTGACGTTCTTGATGATTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 73423 ||||| || | ||||| ||||| ||| || ||||| || ||| | || ||||| ||| Sbjct 31329 TTTGATATTATGGATGACTGGTTGCGGAGGGACCGTTTTGTTTTCGTAGGTTGGTCCGGT 31270 Query 73424 CTTTTACTTTTACCTTGTGCTTACCTAGCAATCGGAGGTTGGTTCGTAGGAACTACTTTC 73483 || || || || |||||||| ||| | || | || ||||||||| ||| || ||||| Sbjct 31269 CTATTGCTCTTTCCTTGTGCCTACTTTGCTTTAGGGGGTTGGTTCACAGGTACAACTTTT 31210 Query 73484 GTGACCTCATGGTACACACATGGTATTGCATCCTCATATCTTGAGGGAGCAAATTTTTTA 73543 || ||||| ||||| || ||||| | || ||| ||| | || || || || ||| Sbjct 31209 GTAACCTCCTGGTATACCCATGGATTGGCCAGCTCCTATTTGGAAGGCTGCAACTTCTTA 31150 Query 73544 ACTGCAGCAGTATCAACACCTGGTGATGCTATGGGTCATAGTCTATTGTTCCTTTGGGGA 73603 || || ||||| || || |||| | || | | | ||| | | ||||| || ||||| Sbjct 31149 ACCGCTGCAGTTTCTACCCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGT 31090 Query 73604 CCAGAGGCACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACTATGGAACTTTGTA 73663 || || || ||||| ||| || || |||| |||||||||||| || |||| ||||| Sbjct 31089 CCTGAAGCGCAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTT 31030 Query 73664 GCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTTAGACAGTTTGAGATTGCAGGA 73723 || | || |||| || ||||| |||||||| ||| | | || ||||| ||||| || Sbjct 31029 GCTCTCCACGGAGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAAATTGCTCGA 30970 Query 73724 CTTGTTGGGATACGTCCTTACAACGCATTAGCTTTTTCAGCAGTTATCGCAGTATTCACG 73783 || | || ||||| || ||| | || ||||| | || || || || Sbjct 30969 TCCGTGCAATTGCGACCTTATAATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTT 30910 Query 73784 AGCATCTTTCTAATATATCCTTTAGGACAGCATAGTTGGTTCTTCGCACCTTCATTCGGT 73843 | || || || ||||| |||| || |||||||||| |||||| || ||| Sbjct 30909 TCTGTATTCCTGATTTATCCGCTAGGTCAATCCGGTTGGTTCTTTGCACCTAGTTTTGGT 30850 Query 73844 GTCGCAGCAATCTTTCGTTATATTTTATTCATACAGGGTTTCCACAATATAACTCTTAAT 73903 || ||||| || ||||| | || | || | || || || || ||| || || || Sbjct 30849 GTAGCAGCTATATTTCGATTCATCCTGTTTTTCCAAGGGTTTCATAATTGGACACTGAAC 30790 Query 73904 CCATTTCATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATTACTATGTGCCATACAT 73963 || |||||||||||||| || || ||| || | || | || | || || || || ||| Sbjct 30789 CCGTTTCATATGATGGGAGTTGCTGGTGTATTGGGCGCGGCTCTGCTGTGCGCTATTCAT 30730 Query 73964 GGTGCAACAGTACAGAACACATTGTATGAAGACACATCACAATACACTGAAGGTAAGATT 74023 ||||| || || | || || || | ||||| || ||| || | Sbjct 30729 GGTGCTACTGTCGAAAATACTTTATTTGAAG------------ACGGTGATGG-----TG 30687 Query 74024 CAATCTACAACTTTCAGAGCATTCGATCCTACACAGGAAGAAGAGACTTATAGTATGATT 74083 ||| |||| ||| | || || | || || || | ||||| |||||| ||| | Sbjct 30686 CAA-ATACA---TTCCGCGCTTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTC 30631 Query 74084 ACTGCTAACAGATTCTGGTCACAGATATTTGGTATAGCATTTTCAAACAAAAGATTCTTA 74143 || || ||| | || ||||| || || ||||| | || ||||| || ||| | | ||| Sbjct 30630 ACCGCCAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTA 30571 Query 74144 CACTTCCTTATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCTATAGGTATCGTA 74203 || ||| ||||||| || ||||| || | ||| | |||| || | || | ||| Sbjct 30570 CATTTCTTTATGTTATTTGTACCAGTAACTGGTTTATGGATGAGCGCTCTTGGAGTAGTA 30511 Query 74204 GGTCTAGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAGAA 74263 ||||| || || ||||| | || || ||||| || ||||| || || | ||||| ||| Sbjct 30510 GGTCTGGCTCTGAACCTGCGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAA 30451 Query 74264 GACCCAGAGTTTGAAACCTTCTACACTAAGAACATTCTTCTTAATGAAGGTATGAGAGCA 74323 || || || ||||| || ||||| || || || |||||| | |||||||| || | || Sbjct 30450 GATCCTGAATTTGAGACTTTCTATACCAAAAATATTCTTTTAAATGAAGGCATTCGTGCT 30391 Query 74324 TGGATGTCATCTGTCGATCAACCCCATGAGAACTTTGTGTTCCCAGAAGAAGTCTTGCCA 74383 |||||| | || ||||| || ||||| ||| || | ||||| || || || | || Sbjct 30390 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCCGAGGAGGTTCTACCC 30331 Query 74384 CGAGGCAACGCACTATAA 74401 || || ||||| || ||| Sbjct 30330 CGTGGAAACGCTCTTTAA 30313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571197858788960