Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq87537 107 1e-18 seq1027 98.7 6e-16 seq215049 96.9 2e-15 seq143273 95.1 8e-15 seq105808 87.8 1e-12 >seq87537 Length=233 Score = 107 bits (118), Expect = 1e-18 Identities = 141/193 (73%), Gaps = 8/193 (4%) Strand=Plus/Minus Query 34789 CTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGAT 34848 |||||| ||||||||||||| || | ||| |||| ||||| ||||| || || ||||| Sbjct 233 CTTCTGGATGTTATAGTCCGCAAGAGTACGCCCATCTTCCAGCTGCTTCCCTGCAAAGAT 174 Query 34849 CAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGC 34908 ||| | ||||||||| |||| | ||| ||||| || | || || ||| || || Sbjct 173 CAGCCTTTGCTGGTCCGGCGGGATCCCTTCCTTATCCTGGATCTTGGCTTTAAC--AT-- 118 Query 34909 TATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTA 34964 |||| || || | ||| || || | || |||||||||||||| || || || | Sbjct 117 TATCAATGGTATCGGAGCTCTCCACCTCTAGAGTGATGGTCTTTCCCGTTAGAGTTTTCA 58 Query 34965 CAAAGATCTGCAT 34977 ||||||||||||| Sbjct 57 CAAAGATCTGCAT 45 >seq1027 Length=13177 Score = 98.7 bits (108), Expect = 6e-16 Identities = 108/143 (76%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 34744 ATCATT--TCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTA 34801 |||||| ||||||||||| ||||| ||||| |||| || ||||||||| |||||| Sbjct 4804 ATCATTGTTCCTCCCCTCAGCCTCAAAACCAGATGAAGTGTAGACTCCTTCTGGATGTTA 4863 Query 34802 TAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGG 34861 ||||| | ||| | || |||| |||| |||||| || ||||| |||| || || ||| Sbjct 4864 TAGTCAGCAAGGGTTCGGCCATCCTCCAATTGCTTGCCAGCGAAAATCAATCTCTGTTGG 4923 Query 34862 TCTTGCGGCACCCCCTCCTTGTC 34884 || |||| | || ||||| || Sbjct 4924 TCCGGCGGGATACCTTCCTTATC 4946 >seq215049 Length=488 Score = 96.9 bits (106), Expect = 2e-15 Identities = 143/197 (73%), Gaps = 8/197 (4%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||||||||| || ||||||| || |||| |||| || |||||||| || || || Sbjct 27 CTCCTTCTGAATATTGTAGTCCGCAAGTGTGCGGCCATCCTCAAGTTGCTTCCCAGCAAA 86 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| |||| ||| || ||| | || | |||||||| || | || ||| || || | Sbjct 87 GATAAGTCTTTGTTGATCTGGTGGAATGCCCTCCTTATCCTGGATCTTTGCCTTCAC--A 144 Query 34906 TGCTATCGATT-CAT-TG--GCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCT 34961 | |||| ||| || || ||| || || | || || || |||||||||||||||| Sbjct 145 T--TATCAATTGTATCTGAACTCTCAACCTCCAACGTAATAGTTTTTCCCGTGAGGGTCT 202 Query 34962 TTACAAAGATCTGCATG 34978 | ||||| || |||||| Sbjct 203 TCACAAAAATTTGCATG 219 >seq143273 Length=304 Score = 95.1 bits (104), Expect = 8e-15 Identities = 152/216 (70%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || || | ||| |||||| || ||||||||||| | ||| | || |||| Sbjct 297 AGGACAAGATGCAGAGTGGACTCCTTTTGGATGTTATAGTCTGCCAGGGTACGTCCATCC 238 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || ||||||||||||| ||||||||| | || | || |||||||| Sbjct 237 TCTAGCTGCTTACCAGCGAAGATCAGTCTTTGCTGGTCCGGGGGAATACCTTCCTTGTCT 178 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | ||||| || || || |||| || || | || || || | || || Sbjct 177 TGGATTTTGGCCTTCAC--AT--TATCAATAGTATCCGAGCTTTCAACCTCCAACGTAAT 122 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || || || || ||||| |||||||||||||| Sbjct 121 GGTTTTACCAGTCAGAGTCTTCACAAAGATCTGCAT 86 >seq105808 Length=219 Score = 87.8 bits (96), Expect = 1e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| || | |||| ||||||||||||||||||||| | ||| |||| |||| Sbjct 121 AGCACCAAATGGAGGGTGGACTCCTTCTGAATGTTATAGTCAGCAAGGGTGCGGCCATCC 180 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 || || ||||||||||| ||||||| | ||||||||| Sbjct 181 TCTAGCTGCTTTCCGGCAAAGATCAACCTTTGCTGGTC 218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324763917213428