Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq128449 95.1 1e-14 seq76495 93.3 3e-14 seq215049 87.8 1e-12 >seq128449 Length=764 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||||||||| |||||| | |||||||| ||||| ||| | || |||| | Sbjct 202 ATGCAAATTTTTGTGAAAACTCTCACAGGCAAGACCATCACCTTGGAGGTGGAGAGTTCT 261 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | || || |||||| ||||| || ||| | || || ||| Sbjct 262 GACACCATTGATAATGTGAAGGCCAAGATTCAAGATAAGGAGGGCATCCCACCAGACCAG 321 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| || |||| ||| || || ||||| ||||| | || | || ||||| ||| Sbjct 322 CAGAGGCTAATTTTTGCTGGCAAGCAGCTAGAGGATGGGCGCACCCTTGCTGACTATAAC 381 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 || |||||||| ||||| ||||| ||||| Sbjct 382 ATCCAAAAGGAATCTACTTTGCATTTGGTG 411 >seq76495 Length=1287 Score = 93.3 bits (102), Expect = 3e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTG 107613 |||||| || ||||| || || | || || |||||||||||| | || |||| ||| Sbjct 425 AATGCAGATATTTGTTAAGACGCTGACTGGGAAAACCATTACCTTGGAGGTGGAGAGCTC 484 Query 107614 GCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATC 107673 |||||| | | | || ||| || || || || |||||| | ||| || | Sbjct 485 T-GATACTATTGATAATGTGAAAGCTAAAATCCAAGACAAGGAAGGCATTCCCCCAGACC 543 Query 107674 AGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACA 107733 ||||||| | || | ||| ||||| ||||||||||| | || |||||||||||| Sbjct 544 AGCAGAGGTTGATCTTTGCTGGTAAGCAGCTGGAGGATGGGCGTACCTTGGCGGACTACA 603 Query 107734 ACATTCAAAAGGAGTCTACGTTGCA 107758 |||| ||||||||||| || |||| Sbjct 604 ACATCCAAAAGGAGTCCACTCTGCA 628 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 107557 TGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGGC 107615 |||||||||||||||| ||| | || || |||||||| || | || ||| ||| | Sbjct 199 TGCAAATTTTTGTCAAGACTCTCACGGGAAAAACCATCACTTTGGAGGTTGAGAGCTC-C 257 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | | || || |||||| || || |||||| | || || ||| Sbjct 258 GACACCATTGACAATGTGAAGGCAAAGATACAGGACAAGGAAGGCATCCCACCAGACCAG 317 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| | |||| ||| || || || || || || | | || | | ||||||||| Sbjct 318 CAGAGGTTGATTTTTGCTGGGAAGCAACTTGAAGATGGTAGGACTCTTGTCGACTACAAC 377 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 ||||||||| |||| | | ||| |||||||| | |||| || |||| Sbjct 378 ATTCAAAAGAAGTCATCCCTTCACTTGGTGTTGCGTCTGCGTGGAGGAA 426 >seq215049 Length=488 Score = 87.8 bits (96), Expect = 1e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 107640 AAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAA 107699 |||||| || || ||||| | ||| ||| |||||||| || || | || || || Sbjct 469 AAGATTCAAGACAAGGAAGGAATTCCCCCGGACCAGCAGAGGCTGATCTTCGCCGGAAAG 410 Query 107700 CAGCTGGAGGACGCCAAAACAATGGCGGACTACAACATTCAAAAGGAGTCTACGTTGCAC 107759 ||||||||||||| || || |||| ||||||||||| || |||||||| || | ||| Sbjct 409 CAGCTGGAGGACGGCAGGACCTTGGCCGACTACAACATCCAGAAGGAGTCCACTCTCCAC 350 Query 107760 ATGGTGTTGAGATTGCGAGGGGG 107782 ||||| | || | ||||| || Sbjct 349 TTGGTGCTTCGACTCCGAGGTGG 327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397739194890268