Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq76495 125 5e-24 seq128449 118 8e-22 seq30058 102 6e-17 seq1027 100 2e-16 seq105808 87.8 1e-12 >seq76495 Length=1287 Score = 125 bits (138), Expect = 5e-24 Identities = 158/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||| || ||||| || ||||| ||||| || ||||| | ||| || Sbjct 641 ACGAAGGACAAGATGCAGAGTGGACTCCTTTTGGATGTTGTAGTCCGCCAAGGTACGCCC 582 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || |||||| | ||||| || ||||| || || ||||| || || || Sbjct 581 ATCCTCCAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTT 522 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | ||| ||| ||| | || | ||| ||||| || || || | || || Sbjct 521 GTCTTGGATTTTAGCTTTCACATTATCAATAGTATCAGAGCTCTCCACCTCCAAGGTAAT 462 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 ||||| ||||| | || |||||||||||||||||| Sbjct 461 GGTTTTCCCAGTCAGCGTCTTAACAAATATCTGCATT 425 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| | || ||||| |||||| ||||| | || | ||||||||||| || || | Sbjct 425 TCCTCCACGCAGACGCAACACCAAGTGAAGGGATGACTTCTTTTGAATGTTGTAGTCGAC 366 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || || | | ||| || ||||| || |||||| | ||||| || ||||| || || || Sbjct 365 AAGAGTCCTACCATCTTCAAGTTGCTTCCCAGCAAAAATCAACCTCTGCTGGTCTGGTGG 306 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || || ||||| |||| ||| || ||| | || | ||||| || || || Sbjct 305 GATGCCTTCCTTGTCCTGTATCTTTGCCTTCACATTGTCAATGGTGTCGGAGCTCTCAAC 246 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCA 29785 || | ||| || ||||| || || | || || ||||| || |||| Sbjct 245 CTCCAAAGTGATGGTTTTTCCCGTGAGAGTCTTGACAAAAATTTGCA 199 >seq128449 Length=764 Score = 118 bits (130), Expect = 8e-22 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||||||||| | || ||||| ||||| |||||||| || |||| |||||| Sbjct 417 ACGGAGCACCAAATGCAAAGTAGATTCCTTTTGGATGTTATAGTCAGCAAGGGTGCGCCC 358 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || ||||||||| | || | || ||||| || || || || ||||| || Sbjct 357 ATCCTCTAGCTGCTTGCCAGCAAAAATTAGCCTCTGCTGGTCTGGTGGGATGCCCTCCTT 298 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||||| ||| || | || ||| | || | ||||||||| || || || | || | Sbjct 297 ATCTTG-AATCTTGGCCTTCACATTATCAATGGTGTCAGAACTCTCCACCTCCAAGGTGA 239 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || ||||| || | ||||| ||||| || ||||| Sbjct 238 TGGTCTTGCCTGTGAGAGTTTTCACAAAAATTTGCAT 202 Score = 109 bits (120), Expect = 4e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || |||||||| || || || || || ||||||||||| || || || | || | | Sbjct 644 CGAAGCACCAAGTGGAGTGTAGACTCCTTTTGAATGTTGTAGTCGGCCAATGTCCTTCCA 585 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || || || ||||| ||| |||||| |||||||| || || || || || || ||| Sbjct 584 TCTTCAAGCTGCTTGCCGGCAAATATCAGCCTTTGCTGGTCAGGTGGGATTCCTTCCTTG 525 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || |||| || || ||| | || | |||||||| ||||||||| | ||| || Sbjct 524 TCCTGTATCTTCGCCTTAACATTGTCGATTGTGTCAGAGCTTTCTACTTCCAAAGTGATT 465 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || | || || ||||| |||||||| Sbjct 464 GTCTTTCCGGTCAGTGTCTTCACAAAAATCTGCAT 430 >seq30058 Length=4835 Score = 102 bits (112), Expect = 6e-17 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || ||||| ||||| ||| | || | ||||| ||||| || ||||||||||| || Sbjct 7 ATCTTCAAGTTGCTTGCCGGCAAAGATGAGCCTTTGTTGATCTGGGGGAATACCCTCCTT 66 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || || ||| | || | ||||| ||| ||| |||||||| ||||| Sbjct 67 GTCCTGGATCTTAGCCTTTACATTGTCAATGGTGTCGGAACTTTCCACTTCAAGGGTTAT 126 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| || || || | ||||| |||||||| ||||| Sbjct 127 AGTCTTTCCGGTAAGAGTTTTCACAAATATTTGCAT 162 >seq1027 Length=13177 Score = 100 bits (110), Expect = 2e-16 Identities = 113/150 (75%), Gaps = 1/150 (1%) Strand=Plus/Plus Query 29548 TTTTATCGTTGT-CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAAT 29606 ||| ||| |||| |||||||||| | || |||| |||||| || || || || || || Sbjct 4800 TTTGATCATTGTTCCTCCCCTCAGCCTCAAAACCAGATGAAGTGTAGACTCCTTCTGGAT 4859 Query 29607 GTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTG 29666 |||||| || |||| ||| || ||| || | ||| |||||||| | |||||||| || Sbjct 4860 GTTATAGTCAGCAAGGGTTCGGCCATCCTCCAATTGCTTGCCAGCGAAAATCAATCTCTG 4919 Query 29667 CTGATCCGGCGGAATACCCTCTTTGTCTTG 29696 || |||||||| ||||| || || || || Sbjct 4920 TTGGTCCGGCGGGATACCTTCCTTATCCTG 4949 >seq105808 Length=219 Score = 87.8 bits (96), Expect = 1e-12 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||||||||| || ||||| || || ||||||||||| || |||| |||||| Sbjct 117 ACGGAGCACCAAATGGAGGGTGGACTCCTTCTGAATGTTATAGTCAGCAAGGGTGCGGCC 176 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCC 29673 ||| || || || || || ||| | ||||| |||||||| ||| Sbjct 177 ATCCTCTAGCTGCTTTCCGGCAAAGATCAACCTTTGCTGGTCC 219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384120546655692