Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_023587.1 Length=189311 Score E Sequences producing significant alignments: (Bits) Value seq98 556 2e-153 seq28 556 2e-153 seq153503 104 3e-17 seq24621 96.9 4e-15 >seq98 Length=41871 Score = 556 bits (616), Expect = 2e-153 Identities = 722/994 (73%), Gaps = 3/994 (0%) Strand=Plus/Minus Query 177558 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 177617 ||||| | ||| |||| ||| | ||||| || || | || ||||| || || || Sbjct 41566 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 41507 Query 177618 ATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCGTCGCTGCTCC 177676 ||||| || ||| | ||| | |||||| |||| || || |||| ||| | ||||| || Sbjct 41506 ATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCCC 41448 Query 177677 CCCCGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 177736 || || || || || || || ||||||||||| |||| || | | || || ||||| Sbjct 41447 TCCAGTAGATATTGATGGTATTCGTGAACCCGTTTCTGGATCTTTACTTTACGGAAACAA 41388 Query 177737 CATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 177796 || || |||||||| || | || |||| ||| || ||| | ||||| || || || Sbjct 41387 TATTATTTCTGGTGCCATTATTCCTACTTCTGCCGCTATAGGTTTGCACTTTTACCCAAT 41328 Query 177797 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 177856 |||||||| ||||| ||||||| ||| | || ||||| ||||||| |||| | || Sbjct 41327 ATGGGAAGCTGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGT 41268 Query 177857 CTTTCACTTCCTTATCGGCATCTATGCATATATGGGACGTGAGTGGGAACTTTCATACCG 177916 | |||||| | | || | | || ||||| ||||||||||||||| | ||| Sbjct 41267 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGCCGTGAGTGGGAACTTAGTTTCCG 41208 Query 177917 TCTAGGTATGCGCCCCTGGATCTGTGTTGCATACTCTGCACCTGTTGCAGCAGCATCCGC 177976 | | ||||||||||| ||||| ||||||||| || || |||||||||||||| |||| Sbjct 41207 TTTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCTACCGC 41148 Query 177977 AGTCTTTCTAGTCTATCCTTTCGGTCAAGGTTCATTCTCCGATGCTATGCCTCTTGGTAT 178036 ||||| | | || || | |||||||| || || || | ||||||| | || || Sbjct 41147 TGTCTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCGGACGGTATGCCTTTAGGAAT 41088 Query 178037 CTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCACCC 178096 |||||||||||| |||| ||| |||||||||| || || ||||| |||||||||||||| Sbjct 41087 CTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCC 41028 Query 178097 GTTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGG 178156 || || ||| | || || || || |||||||| || || || ||| |||||||||||| Sbjct 41027 ATTTCATATGTTAGGCGTAGCGGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG 40968 Query 178157 AAGTCTCGTTACTTCTTCGCTCGTCCGTGAGACGACAGAAACTGAGTCCCAGAACTATGG 178216 | || || || | || | || || ||||||| ||| || || | || Sbjct 40967 TTCCTTGGTAACCTCAAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAGG 40908 Query 178217 TTACAAGTTCGGACAAGAAGAAGAAACATATAACATCGTCGCAGCCCATGGTTACTTCGG 178276 |||||| || || ||||||| ||||| ||||| ||||| || || |||||||| || || Sbjct 40907 TTACAAATTTGGTCAAGAAGGGGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGG 40848 Query 178277 TCGTTTGATCTTCCAATATGCATCGTTCAACAACTCCCGTTCACTGCACTTCTTCCTCGC 178336 || ||||||||||||||||| ||||||||||| |||||| | ||||||||||| || Sbjct 40847 CCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCATTACACTTCTTCCTAGC 40788 Query 178337 AGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTTGGTGTATCCACCATGGCATTTAA 178396 || ||||||||| | || |||||||||||||| | ||| | ||| ||||| || || Sbjct 40787 TGCTTGGCCTGTAATAGGTATCTGGTTCACCGCTTTAGGTATTAGCACTATGGCTTTCAA 40728 Query 178397 CCTCAATGGATTCAACTTCAACCAGTCCATCCTCGACGGACAAGGACGTGTCCTCAACAC 178456 | | ||||| ||||| |||||||| ||| | | || | ||||| ||||| | || || Sbjct 40727 CTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAATAC 40668 Query 178457 ATGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAAAGAAATAG 178516 ||||| || | |||||||||| || || |||||||| ||||| ||| | ||| | Sbjct 40667 TTGGGCTGATATTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAAT-G 40609 Query 178517 CACATAACTTCCCGCTTGATCTTGCAGCAGCTGA 178550 | || |||||||| || || || || || | ||| Sbjct 40608 CTCACAACTTCCCTCTAGACCTAGCTGCTGTTGA 40575 >seq28 Length=37419 Score = 556 bits (616), Expect = 2e-153 Identities = 730/1008 (72%), Gaps = 10/1008 (1%) Strand=Plus/Minus Query 178949 TGGATGACTGGCTTAATCGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 179008 ||||||||||| | |||| || ||||| || || |||||||| || || | || Sbjct 31319 TGGATGACTGGTTGCGGAGGGACCGTTTTGTTTTCGTAGGTTGGTCCGGTCTATTGCTCT 31260 Query 179009 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 179068 |||| ||| || |||| | || |||||| | || || ||| ||||||| || | Sbjct 31259 TTCCTTGTGCCTACTTTGCTTTAGGGGGTTGGTTCACAGGTACAACTTTTGTAACCTCCT 31200 Query 179069 GGTACACCCATGGTCTTGCTAGTTCCTATCTTGAAGG-TGCTAACTTTCTTACGGCAGCT 179127 |||| |||||||| | || || |||||| | ||||| ||| ||||| | || || || Sbjct 31199 GGTATACCCATGGATTGGCCAGCTCCTATTTGGAAGGCTGC-AACTTCTTAACCGCTGCA 31141 Query 179128 GTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCT 179187 || || || |||||| || | | | |||||| | | |||| ||||||||||| | Sbjct 31140 GTTTCTACCCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAGCG 31081 Query 179188 CAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATGGAATTTCGTGGCTCTCCAC 179247 || ||| |||| || ||||| ||| | || || || |||| ||| || ||||||||| Sbjct 31080 CAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCAC 31021 Query 179248 GGTGCCTTCGCCCTAATTGGATTCATGCTTCGTCAGTTTGAACTGGCACGTCTCATCGGT 179307 || || |||| ||||| || || ||| | ||||| |||||| | || || ||| || Sbjct 31020 GGAGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAAATTGCTCG----ATCCGT 30965 Query 179308 A----TCCGTCCTTACAATGCGATTGCTTTTACTGGTCCTATTGCCGTATTCGTTAGTGT 179363 | || ||||| ||||| || || ||| ||||||| ||||| || || ||| ||| Sbjct 30964 GCAATTGCGACCTTATAATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGT 30905 Query 179364 ATTTCTCATCTACCCACTTGGACAATCCAGTTGGTTCTTTGCGCCATCGTTTGGTGTTGC 179423 ||| || || || || || || |||||| ||||||||||||| || |||||||| || Sbjct 30904 ATTCCTGATTTATCCGCTAGGTCAATCCGGTTGGTTCTTTGCACCTAGTTTTGGTGTAGC 30845 Query 179424 GGCGATCTTTAGATTCCTACTTTTCTTACAAGGTTTCCACAACTGGACACTCAACCCCTT 179483 || || ||| ||||| | || || || ||||| || || || |||||||| ||||| || Sbjct 30844 AGCTATATTTCGATTCATCCTGTTTTTCCAAGGGTTTCATAATTGGACACTGAACCCGTT 30785 Query 179484 TCACATGATGGGAGTTGCAGGTATCCTGGGTGGTGCTCTGCTCTCTGCTATTCATGGAGT 179543 ||| |||||||||||||| ||| | |||| | |||||||| | ||||||||||| | Sbjct 30784 TCATATGATGGGAGTTGCTGGTGTATTGGGCGCGGCTCTGCTGTGCGCTATTCATGGTGC 30725 Query 179544 AACTGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTTAAAGCGTTCGA 179603 ||||| || ||||| || | |||||| || || ||||| ||||| || || | Sbjct 30724 TACTGTCGAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTCCGCGCTTTTAA 30665 Query 179604 CTCTACGCAAGAGGAGGAGACCTATTCTATGGTTACAGCGAACCGTTTTTGGTCGCAGAT 179663 | | || |||| || || || ||||| ||||| || || ||||| |||||||| || || Sbjct 30664 CCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCCAACCGCTTTTGGTCCCAAAT 30605 Query 179664 CTTCGGGGTTCCGTTTAGCAATAAGCGTTGGTTCCACTTCTTTAAGCTGTTTGTTCCTGT 179723 ||| |||||| | ||| |||||| |||||||| || ||||||| | | ||||| || || Sbjct 30604 CTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGT 30545 Query 179724 CATGGGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTAGCTCTTAATCTTCGTGCTTA 179783 | ||| | ||| | || |||| | | || || ||||| || || ||||| || Sbjct 30544 AACTGGTTTATGGATGAGCGCTCTTGGAGTAGTAGGTCTGGCTCTGAACCTGCGTGCCTA 30485 Query 179784 TGATTTTGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTATAC 179843 ||| || || ||| || ||| | ||||| ||||||||||| || ||||| |||||||| Sbjct 30484 TGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTATAC 30425 Query 179844 AAAGAACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCACA 179903 || || |||||| | |||||||| | ||||||||| |||| || ||||| || || Sbjct 30424 CAAAAATATTCTTTTAAATGAAGGCATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCA 30365 Query 179904 TGAAAACTTCATCTTCCCAGAAGAAGTCCTACCTAGTGGTAACGCACT 179951 ||||||| | || ||||| || || || ||||| |||| ||||| || Sbjct 30364 TGAAAACCTTATATTCCCCGAGGAGGTTCTACCCCGTGGAAACGCTCT 30317 >seq153503 Length=945 Score = 104 bits (114), Expect = 3e-17 Identities = 122/163 (75%), Gaps = 4/163 (2%) Strand=Plus/Minus Query 138517 TTTGACTGTGCTGATGATCAGTACATCCTTGATGCTGCTGATGAAGCAGGTATTGATCTT 138576 ||||| || |||||||| |||||| ||||| || ||||| ||| | ||||| || || Sbjct 804 TTTGATTGCCCTGATGATGTGTACATTCTTGACGCAGCTGAGGAAACCGGTATCGACCTC 745 Query 138577 CCCTACTCCTGTCGTGCTGGTGCATGTTCTACCTGTGCTGGTAAATTAGTTGAAGGAACT 138636 || ||||| || | |||||| | || ||| | ||||||||||| | || |||| || Sbjct 744 CCATACTCATGCAGGGCTGGTTCTTGCTCTTCATGTGCTGGTAAGGTTGTGTCAGGATCT 685 Query 138637 GTAGATCAGTCTGA--CCAGTCTTTCCTTGATGATGACCAAAT 138677 || ||||||||||| ||| | |||||| |||||||| || Sbjct 684 GTGGATCAGTCTGATGGCAG--CTACCTTGACGATGACCAGAT 644 >seq24621 Length=2300 Score = 96.9 bits (106), Expect = 4e-15 Identities = 177/252 (70%), Gaps = 8/252 (3%) Strand=Plus/Minus Query 138527 CTGATGATCAGTACATCCTTGATGCTGCTGATGAAGCAGGTATTGATCTTCCCTACTCCT 138586 ||||||| ||||||||| ||||| || || || || || |||| || || || |||| Sbjct 2250 CTGATGACTCGTACATCCTGGATGCAGCCGAGGATGCTGGAGTTGAGCTGCCATATTCCT 2191 Query 138587 GTCGTGCTGGTGCATGTTCTACCTGTGCTGGTAA-ATT-AGTTGAAGGAACTGTAGATCA 138644 | | || || ||||| |||||||||||||| || ||| || | || || || || || Sbjct 2190 GCAGGGCCGGGGCATGCTCTACCTGTGCTGGGAAGATTGCGTCG--GGCACAGTCGACCA 2133 Query 138645 GTCTGACCAGTCTTTCCTTGATGATGACCAAATTGCAGCAGGATT-TATCATGACTTGCG 138703 ||| || || ||||| ||||| || || || | |||| || | |||| |||| Sbjct 2132 GTCCGATGGTTCCTTCCTCGATGA-GAATCAAGTGAATCAGGGTTACTTGCTGACCTGCG 2074 Query 138704 TAGCATACCCCACATCCGATTGTATAATTGAAACTGAAAAAGAGGACGAACTATACTGA- 138762 | ||||||| || || |||||| | || | ||| | || || ||||| |||||| Sbjct 2073 TTTCATACCCAACTTCAGATTGTGTGATCCACACTCACAAGGAAACTGAACTTTACTGAG 2014 Query 138763 -TGGAGTTTACA 138773 | | ||||||| Sbjct 2013 CTTGCGTTTACA 2002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603895532589920