Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq128449 147 4e-30 seq215049 143 5e-29 seq76495 125 1e-23 seq30058 118 2e-21 seq87537 113 9e-20 >seq128449 Length=764 Score = 147 bits (162), Expect = 4e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || || |||| ||||||||| || || || ||||| |||| || | | || Sbjct 417 ACGGAGCACCAAATGCAAAGTAGATTCCTTTTGGATGTTATAGTCAGCAAGGGTGCGCCC 358 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || ||||| || || |||||||| ||||| || || || ||||| || || || ||||| Sbjct 357 ATCCTCTAGCTGCTTGCCAGCAAAAATTAGCCTCTGCTGGTCTGGTGGGATGCCCTCCTT 298 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 |||||||||||| || || ||||| ||||| || ||| | || || ||||| || || Sbjct 297 ATCTTGAATCTTGGCCTTCACATTATCAATGGTGTCAGAACTCTCCACCTCCAAGGTGAT 238 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||||||||| | || || ||||| || ||||| Sbjct 237 GGTCTTGCCTGTGAGAGTTTTCACAAAAATTTGCAT 202 Score = 131 bits (144), Expect = 3e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || ||||| || ||||| || || || || || || || | | | || || Sbjct 644 CGAAGCACCAAGTGGAGTGTAGACTCCTTTTGAATGTTGTAGTCGGCCAATGTCCTTCCA 585 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||||| || || || || ||||| || || ||||| || || || || ||||||||||| Sbjct 584 TCTTCAAGCTGCTTGCCGGCAAATATCAGCCTTTGCTGGTCAGGTGGGATTCCTTCCTTG 525 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 || || ||||| || || ||||| || || || ||| ||||||||||||||| || Sbjct 524 TCCTGTATCTTCGCCTTAACATTGTCGATTGTGTCAGAGCTTTCTACTTCCAAAGTGATT 465 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || |||| ||||| ||||| |||||||| Sbjct 464 GTCTTTCCGGTCAGTGTCTTCACAAAAATCTGCAT 430 Score = 122 bits (134), Expect = 2e-22 Identities = 140/186 (75%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 || || ||||| ||||| ||||| || || ||||| ||||||| || | | || || Sbjct 185 AGCACCAAGTGGAGAGTGGATTCCTTTTGGATATTGTAATCAGCAAGGGTACGGCCATCC 126 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 |||||||| || |||||||| || || || || || || || || |||||||||||||| Sbjct 125 TCTAGTTGCTTGCCAGCAAAAATGAGCCTCTGCTGGTCCGGTGGGATTCCTTCCTTATCC 66 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTATCGT 82777 ||||| || || || ||||| ||||| || || | || | || || |||||||| || || Sbjct 65 TGAATTTTGGCCTTCACATTATCAATGGTGTC-TGAGCTCTCAACCTCCAAAGTGATGGT 7 Query 82778 CTTGCC 82783 || || Sbjct 6 TTTTCC 1 >seq215049 Length=488 Score = 143 bits (158), Expect = 5e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 || || || || |||||||| || ||||| ||||| || || | || | | || || Sbjct 7 AGTACCAAATGGAGAGTAGACTCCTTCTGAATATTGTAGTCCGCAAGTGTGCGGCCATCC 66 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || ||||| || ||||||||||| ||||||||||||||||| || || || |||||||| Sbjct 67 TCAAGTTGCTTCCCAGCAAAGATAAGTCTTTGTTGATCTGGTGGAATGCCCTCCTTATCC 126 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778 || |||||||| || ||||| ||||| ||||| | || || ||||| || || || Sbjct 127 TGGATCTTTGCCTTCACATTATCAATTGTATCTGAACTCTCAACCTCCAACGTAATAGTT 186 Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || || | ||||| ||||| || ||||| Sbjct 187 TTTCCCGTGAGGGTCTTCACAAAAATTTGCAT 218 Score = 89.7 bits (98), Expect = 1e-12 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || ||||| ||||| || || ||||| || || || || | | | || ||| Sbjct 339 CGAAGCACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTCCTGCCG 398 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || || || ||||| || ||||| || || || || || || || ||||||||||| Sbjct 399 TCCTCCAGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGGGGAATTCCTTCCTTG 458 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAAT 82744 ||||||||||| || || || || || || Sbjct 459 TCTTGAATCTTGGCCTTGACGTTGTCGAT 487 >seq76495 Length=1287 Score = 125 bits (138), Expect = 1e-23 Identities = 160/218 (73%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || | |||||||| || || || || || || || || | | | | || Sbjct 641 ACGAAGGACAAGATGCAGAGTGGACTCCTTTTGGATGTTGTAGTCCGCCAAGGTACGCCC 582 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || || || || ||||||||||| | || || || ||||| || || |||||||| Sbjct 581 ATCCTCCAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTT 522 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTA 82773 ||||| || || ||||| ||||| ||||| |||||| || | || || ||||| || | Sbjct 521 GTCTTGGATTTTAGCTTTCACATTATCAATAGTATCAG-AGCTCTCCACCTCCAAGGTAA 463 Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 | || || || |||| |||||| ||||||||||||||| Sbjct 462 TGGTTTTCCCAGTCAGCGTCTTAACAAATATCTGCATT 425 >seq30058 Length=4835 Score = 118 bits (130), Expect = 2e-21 Identities = 121/158 (77%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712 || ||||| ||||| || || |||||||| || |||||||||||||| || || || ||| Sbjct 5 CCATCTTCAAGTTGCTTGCCGGCAAAGATGAGCCTTTGTTGATCTGGGGGAATACCCTCC 64 Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTT 82772 || || || ||||| || |||||||| ||||| || || | ||| ||||| | ||| Sbjct 65 TTGTCCTGGATCTTAGCCTTTACATTGTCAATGGTGTCGGAACTTTCCACTTCAAGGGTT 124 Query 82773 ATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || ||||| || || | || || |||||||| ||||| Sbjct 125 ATAGTCTTTCCGGTAAGAGTTTTCACAAATATTTGCAT 162 >seq87537 Length=233 Score = 113 bits (124), Expect = 9e-20 Identities = 140/189 (74%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 82623 TTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATT 82682 ||||| || ||||| || | ||| | | || ||||| || || || || |||||||| Sbjct 232 TTCTGGATGTTATAGTCCGCAAGAGTACGCCCATCTTCCAGCTGCTTCCCTGCAAAGATC 173 Query 82683 AGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCA 82742 || ||||| || || || || || ||||||||||| || ||||| ||||| ||||| ||| Sbjct 172 AGCCTTTGCTGGTCCGGCGGGATCCCTTCCTTATCCTGGATCTTGGCTTTAACATTATCA 113 Query 82743 ATCGTATCATTAGGT-TCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAA 82801 || ||||| || | || || || | ||| || ||||| || || | || || ||||| Sbjct 112 ATGGTATC-GGAGCTCTCCACCTCTAGAGTGATGGTCTTTCCCGTTAGAGTTTTCACAAA 54 Query 82802 TATCTGCAT 82810 |||||||| Sbjct 53 GATCTGCAT 45 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 978883408370068