Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq60997 89.7 1e-12 seq28536 87.8 4e-12 >seq60997 Length=3888 Score = 89.7 bits (98), Expect = 1e-12 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 279899 AAGATTATATTCAGTTGTTTCAAAAGAAAATTGGTAAAGGAAATTCGTGTTGCTCAGTTA 279958 ||||| | ||| ||| ||||||||| || || |||||||| || || ||||| Sbjct 2486 AAGATCCTTTTCTGTTCTTTCAAAAGGAATTTTGTAAAGGAGGCAAAGGTAGCACAGTTT 2427 Query 279959 GCAGGTTATGTTTCAGAACATGCAGGTTATCATCACGGTGAAGCGTCTCTTCAAGGTGCT 280018 | |||||||| || || || | | ||| |||||||| ||| | |||| ||| | Sbjct 2426 TCTGGTTATGTATCTGAGCACTCTGCTTACCATCACGGCGAACAGAGTCTTGCTGGTACC 2367 Query 280019 ATTGTAGGTCTTGCCCAAGATTTTATGGCTTCAAACAACTTAAATCTGCTTTCACCAAAT 280078 || |||| | || || || ||| | | | || ||| | ||||| ||| |||||| Sbjct 2366 ATCATAGGAATGGCTCAGGACTTTGTTGGTAGCAATAACGTTAATCTCCTTCAGCCAAAT 2307 Query 280079 GGTCAATTTGGTTCTCGTA 280097 |||||||||||| |||||| Sbjct 2306 GGTCAATTTGGTACTCGTA 2288 >seq28536 Length=6940 Score = 87.8 bits (96), Expect = 4e-12 Identities = 132/184 (72%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 305307 GACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGT 305366 ||||||| ||||| ||| | || || || ||| | ||||| || |||||||||| Sbjct 4044 GACATTTAAATGATGGTGACTTTGTCCTTTTTAATCGTCAACCTAGTCTTCATAAAATGT 3985 Query 305367 CTATGATGGCTCATAAAGTCAAAGTATTAT-CTGGATTG-ACATTTCGATTAAATGTAAG 305424 | || |||| |||| | |||| ||||| | | ||| || ||||| | || || Sbjct 3984 CGATAATGGGCCATAGAATCAAG--ATTATGCCGTATTCCACTTTTCGCCTCAACTTATC 3927 Query 305425 TGCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCA 305484 || | || || ||||| ||||||||||| ||||| |||||||||||||| ||||| Sbjct 3926 TGTGACATCACCCTACAATGCTGATTTTGATGGTGATGAGATGAATATGCATGTTCCTCA 3867 Query 305485 ATCA 305488 |||| Sbjct 3866 ATCA 3863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1183254404401532