Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq128449 147 5e-30 seq215049 123 6e-23 seq158123 104 6e-17 seq18136 98.7 2e-15 seq76495 96.9 8e-15 >seq128449 Length=764 Score = 147 bits (162), Expect = 5e-30 Identities = 153/201 (76%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || || || ||||| || |||||||||||||| ||||| |||||| Sbjct 433 CAGATTTTTGTGAAGACACTGACCGGAAAGACAATCACTTTGGAAGTAGAAAGCTCTGAC 492 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| |||| || ||| ||||| || || || |||||||| || ||| ||| Sbjct 493 ACAATCGACAATGTTAAGGCGAAGATACAGGACAAGGAAGGAATCCCACCTGACCAGCAA 552 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || || || || ||||| |||||| | |||||||||||||| |||||||| |||||| | Sbjct 553 AGGCTGATATTTGCCGGCAAGCAGCTTGAAGATGGAAGGACATTGGCCGACTACAACATT 612 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 || || |||||||| || ||| Sbjct 613 CAAAAGGAGTCTACACTCCAC 633 Score = 91.5 bits (100), Expect = 3e-13 Identities = 130/183 (71%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| |||||||| || || ||||| ||||| ||||| ||||||||||| | || Sbjct 217 AAAACTCTCACAGGCAAGACCATCACCTTGGAGGTGGAGAGTTCTGACACCATTGATAAT 276 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||||||||| || || || || || ||| || || || || || Sbjct 277 GTGAAGGCCAAGATTCAAGATAAGGAGGGCATCCCACCAGACCAGCAGAGGCTAATTTTT 336 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| | || ||||| | || | || || || ||| |||| || || ||| Sbjct 337 GCTGGCAAGCAGCTAGAGGATGGGCGCACCCTTGCTGACTATAACATCCAAAAGGAATCT 396 Query 206365 ACT 206367 ||| Sbjct 397 ACT 399 >seq215049 Length=488 Score = 123 bits (136), Expect = 6e-23 Identities = 110/138 (80%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| || ||||||||| |||||| || || || ||||||||||||||| Sbjct 469 AAGATTCAAGACAAGGAAGGAATTCCCCCGGACCAGCAGAGGCTGATCTTCGCCGGAAAG 410 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| |||| || || ||||| |||||||| |||||| ||||||| ||||| ||||| ||| Sbjct 409 CAGCTGGAGGACGGCAGGACCTTGGCCGACTACAACATCCAGAAGGAGTCCACTCTCCAC 350 Query 206374 CTTGTTTTGAGACTTCGA 206391 | || | |||| ||| Sbjct 349 TTGGTGCTTCGACTCCGA 332 Score = 96.9 bits (106), Expect = 8e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| |||||||| || || ||||| || || ||||| || ||| | || Sbjct 203 AAGACCCTCACGGGAAAAACTATTACGTTGGAGGTTGAGAGTTCAGATACAATTGATAAT 144 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||| || || || || || ||| || || |||||||||||||| Sbjct 143 GTGAAGGCAAAGATCCAGGATAAGGAGGGCATTCCACCAGATCAACAAAGACTTATCTTT 84 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| | || ||||| | || | || || ||||| | ||||| |||||| Sbjct 83 GCTGGGAAGCAACTTGAGGATGGCCGCACACTTGCGGACTACAATATTCAGAAGGAGTCT 24 Query 206365 ACTCTTCA 206372 ||||| || Sbjct 23 ACTCTCCA 16 Score = 91.5 bits (100), Expect = 3e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 204751 TCGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGT 204810 ||| |||| | || | ||| ||||| ||||| ||||||| || ||||| ||||| || Sbjct 332 TCGGAGTCGAAGCACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGT 391 Query 204811 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCC 204848 ||| || || ||||||||||||||||||||||| |||| Sbjct 392 CCTGCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGCC 429 >seq158123 Length=1217 Score = 104 bits (114), Expect = 6e-17 Identities = 81/97 (84%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 || || | ||| |||||||| || || ||||| ||||||| ||| || || |||| |||| Sbjct 104 CGGAGACGCAAGACAAGGTGGAGGGTCGACTCCTTCTGGATATTGTAATCCGCCAGAGTC 45 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCC 204848 || ||||| ||||||||||||||||||||||| |||| Sbjct 44 CTCCCATCCTCCAGCTGCTTTCCGGCGAAGATCAGCC 8 Score = 102 bits (112), Expect = 2e-16 Identities = 83/101 (82%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 206290 CAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAAC 206349 || || || |||||||||||||||||| |||| ||||| |||||| |||| |||||||| Sbjct 4 CAGAGGCTGATCTTCGCCGGAAAGCAGCTGGAGGATGGGAGGACTCTGGCGGATTACAAT 63 Query 206350 GTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||||| ||||| || || |||||||| ||| | || || Sbjct 64 ATCCAGAAGGAGTCGACCCTCCACCTTGTCTTGCGTCTCCG 104 >seq18136 Length=774 Score = 98.7 bits (108), Expect = 2e-15 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 206260 CAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTG 206319 || || || |||||||| || ||| || ||||| || |||||||| |||||| || Sbjct 521 CAGGACAAGGAAGGAATCCCTCCAGACCAGCAGAGACTGATTTTCGCCGGCAAGCAGCTG 580 Query 206320 GAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTT 206379 || ||||| | ||| | || || |||||| ||||||||||||| || ||||| || ||| Sbjct 581 GAGGATGGCCGAACTCTCGCTGACTACAACATCCAGAAAGAGTCAACACTTCATCTGGTT 640 Query 206380 TTGAGACTT 206388 ||||| ||| Sbjct 641 TTGAGGCTT 649 Score = 91.5 bits (100), Expect = 3e-13 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 204754 AAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCT 204813 ||| |||||||| || ||||| || ||||||||||||| || |||||||| | ||| | Sbjct 649 AAGCCTCAAAACCAGATGAAGTGTTGACTCTTTCTGGATGTTGTAGTCAGCGAGAGTTCG 590 Query 204814 TCCATCTTCCAGCTGCTTTCCGGCGAAGATAAG 204846 ||||| ||||||||||| |||||||| || || Sbjct 589 GCCATCCTCCAGCTGCTTGCCGGCGAAAATCAG 557 >seq76495 Length=1287 Score = 96.9 bits (106), Expect = 8e-15 Identities = 150/213 (70%), Gaps = 1/213 (0%) Strand=Plus/Plus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| ||| || ||||| |||||||| ||||||||||| || || || || ||||| | Sbjct 206 TTTTGTCAAGACTCTCACGGGAAAAACCATCACTTTGGAGGTTGAGAGCTCCGACACCAT 265 Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297 || || ||| |||||| || || || ||||| || || ||| || || | Sbjct 266 TGACAATGTGAAGGCAAAGATACAGGACAAGGAAGGCATCCCACCAGACCAGCAGAGGTT 325 Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357 || || || || ||||| | |||||||| |||||| | | ||| |||||| | || || Sbjct 326 GATTTTTGCTGGGAAGCAACTTGAAGATGGTAGGACTCTTGTCGACTACAACATTCAAAA 385 Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 |||| | |||||| | || ||| | || || Sbjct 386 GAAGTCATCCCTTCACTTGGTGTTGCGTCTGCG 418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178277371809052