Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_025456.1 Length=46547 Score E Sequences producing significant alignments: (Bits) Value seq98 581 1e-161 >seq98 Length=41871 Score = 581 bits (644), Expect = 1e-161 Identities = 727/985 (74%), Gaps = 14/985 (1%) Strand=Plus/Minus Query 19510 TAACTGGGTCACTTCGACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGAT 19569 ||||||| | || ||| | ||||||||||| |||| |||||||| ||||||| Sbjct 41561 TAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGAT 41502 Query 19570 TCCGTGTCTCCTTGCAGCCACCATCTGC-TTCATTATTGCATTCATTGCGGCTCCACCAG 19628 || | | | | || || |||| || ||||| || |||||||| || || |||| Sbjct 41501 CCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCAG 41443 Query 19629 TTGACATTGATGGCATCCGCGAACCCGTATCCGGTAGCCTT-CTTTATGGAAACAACATC 19687 | || |||||||| || || |||||||| || || | | || ||||| |||||||| || Sbjct 41442 TAGATATTGATGGTATTCGTGAACCCGTTTCTGG-ATCTTTACTTTACGGAAACAATATT 41384 Query 19688 ATATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCCAATTT 19745 || || || ||| | |||| | | || || || || | ||||| |||||||| | Sbjct 41383 ATTTCTGGTGCCATTATTCCTACTTCTGCC--GCTATAGGTTTGCACTTTTACCCAATAT 41326 Query 19746 GGGAAGCTAGTTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCT 19805 |||||||| || ||||||||||| | |||||||| || || | |||| | || Sbjct 41325 GGGAAGCTGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGTTC 41266 Query 19806 TCCACTTCCTCATTGGCATCTATGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGAC 19865 | |||||| | |||| | | ||||||||| || |||||||||||||| | || Sbjct 41265 TACACTTCTTACTTGGTGTAGCTTGTTACATGGGCCGTGAGTGGGAACTTAGTTTCCGTT 41206 Query 19866 TAGGAATGAGGCCTTGGATTTGTGTTGCCTACTCTGCTCCGGTTGCAGCCGCCTCTGCGG 19925 | || ||| | ||||||||| |||||| || || ||||| |||||||| || | || | Sbjct 41205 TGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCTACCGCTG 41146 Query 19926 TCTTTCTCGTCTACCCGTTTGGTCAGGGTAGCTTCTCCGATGCTATGCCTTTGGGTATCT 19985 |||| | | ||||| ||||||| || ||||| || || | ||||||||| || |||| Sbjct 41145 TCTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCGGACGGTATGCCTTTAGGAATCT 41086 Query 19986 CGGGTACGTTCAACTACATGTTGGTATTCCAAGCCGAACATAACATTCTCATGCACCCGT 20045 | ||||| ||||||| ||| | |||||||| || || || ||||| || |||||||| | Sbjct 41085 CTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCAT 41026 Query 20046 TCCACATGCTTGGTGTGGCTGGTGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTT 20105 | || ||| | || || || ||||||||||| || || ||||||||||| ||||| |||| Sbjct 41025 TTCATATGTTAGGCGTAGCGGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTT 40966 Query 20106 CGCTTGTTACGTCCTC--GCTTGTGC-GTGAGACTACTGAACAGGAAAGTCAGAACTATG 20162 | |||| || |||| | ||| | | || ||||| ||| | ||| | || | | Sbjct 40965 C-CTTGGTAA--CCTCAAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAG 40909 Query 20163 GTTACAAGTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTG 20222 ||||||| ||||| ||||||| || || ||||| |||||||||||||||||||| |||| Sbjct 40908 GTTACAAATTTGGTCAAGAAGGGGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTG 40849 Query 20223 GACGTTTGATCTTCCAATACGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTG 20282 | || |||||||||||||| ||| ||||||||| ||||| ||||||||||||| | Sbjct 40848 GCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCATTACACTTCTTCCTAG 40789 Query 20283 CTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTA 20342 |||| ||||| || |||| || |||||| | || || || || || ||||| || | Sbjct 40788 CTGCTTGGCCTGTAATAGGTATCTGGTTCACCGCTTTAGGTATTAGCACTATGGCTTTCA 40729 Query 20343 ATCTGAACGGTTTCAACTTTAACCAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATA 20402 | | || |||||||| || ||||| ||| | | || | | |||||||| ||| ||| Sbjct 40728 ACTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAATA 40669 Query 20403 CTTGGGCTGACATTCTCAATCGTGCTAATCTCGGGTTTGAGGTGATGCATGAACGGAATG 20462 |||||||||| ||| |||| |||||||| || || | || || ||||||||||| |||| Sbjct 40668 CTTGGGCTGATATTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 40609 Query 20463 CTCATAACTTCCCACTTGACCTTGC 20487 |||| |||||||| || ||||| || Sbjct 40608 CTCACAACTTCCCTCTAGACCTAGC 40584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148415220763896