Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_025464.1 Length=44147 Score E Sequences producing significant alignments: (Bits) Value seq98 609 7e-170 >seq98 Length=41871 Score = 609 bits (674), Expect = 7e-170 Identities = 731/984 (74%), Gaps = 12/984 (1%) Strand=Plus/Minus Query 18723 TTTTTGTGACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACT 18782 ||| ||| ||||| ||||||| || || ||||||||||| || || |||||||| | Sbjct 41567 TTTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTT 41508 Query 18783 GATGATTCCGTGTCTCCTTGCAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCAC 18841 |||||| || | | | | || ||| | ||| || ||||| || ||||||||||| | Sbjct 41507 GATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCC 41449 Query 18842 CTCCTGTAGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACA 18901 |||| ||||| |||||||| || || || || ||| | || | | ||||| ||||||| Sbjct 41448 CTCCAGTAGATATTGATGGTATTCGTGAACCCGTTTCTGGATCTTTACTTTACGGAAACA 41389 Query 18902 ACATCATATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCC 18959 | || || || || ||| | |||| | | || || || || | ||||| ||||| Sbjct 41388 ATATTATTTCTGGTGCCATTATTCCTACTTCTGCC--GCTATAGGTTTGCACTTTTACCC 41331 Query 18960 AATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGT 19019 ||| ||||||||| || ||||||||||| | |||||||| || || | |||| | Sbjct 41330 AATATGGGAAGCTGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAAT 41271 Query 19020 GGTCTTCCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTA 19079 || | |||||| | |||| || | ||||||||| || |||||||||||||| | Sbjct 41270 TGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGCCGTGAGTGGGAACTTAGTTT 41211 Query 19080 TCGACTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTC 19139 || | || ||||||||||||||| |||||| || |||||||||||||| ||||| | Sbjct 41210 CCGTTTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCTAC 41151 Query 19140 TGCGGTCTTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGGG 19199 || |||||| | | || ||| |||||||||| |||| |||| ||||||||| || Sbjct 41150 CGCTGTCTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCGGACGGTATGCCTTTAGG 41091 Query 19200 TATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCA 19259 || |||||| ||||||| ||| |||||||||||||||| || |||||||| ||||| Sbjct 41090 AATCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCA 41031 Query 19260 CCCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCA 19319 ||| || || ||| | || || || ||||| |||||||| || ||||| ||||| ||||| Sbjct 41030 CCCATTTCATATGTTAGGCGTAGCGGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCA 40971 Query 19320 CGGTTCGCTTGTTACGTCCTC--GCTTG-TGCGTGAAACTACTGAAGAGGTATCTCAGAA 19376 ||||| |||| || |||| | ||| | | |||||||| ||| | | |||| || Sbjct 40970 TGGTTC-CTTGGTA--ACCTCAAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAA 40914 Query 19377 CTATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTA 19436 | || ||||| ||||| ||||||| || |||||||| || || || |||||||| || Sbjct 40913 TGAAGGTTACAAATTTGGTCAAGAAGGGGAAACTTATAATATCGTAGCCGCTCATGGTTA 40854 Query 19437 TTTTGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTT 19496 |||||| || | || ||||| || || |||||||| ||||| |||| ||||| Sbjct 40853 TTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCATTACACTTCTT 40794 Query 19497 TTTGGCTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGC 19556 | |||||||||||||| | || || ||||| |||| | || | ||||| ||||| Sbjct 40793 CCTAGCTGCTTGGCCTGTAATAGGTATCTGGTTCACCGCTTTAGGTATTAGCACTATGGC 40734 Query 19557 ATTCAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCAT 19616 |||||||| ||||| || || || ||||| ||| | |||| | | |||||||| || Sbjct 40733 TTTCAACTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAAT 40674 Query 19617 TGATACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACG 19676 | ||||||||||||| ||| |||| ||||||||||| || | || || ||||| ||||| Sbjct 40673 TAATACTTGGGCTGATATTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACG 40614 Query 19677 TAATGCTCATAACTTCCCACTTGA 19700 ||||||||| |||||||| || || Sbjct 40613 TAATGCTCACAACTTCCCTCTAGA 40590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 140756562658296