Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq76495 140 3e-28 seq128449 114 1e-20 seq143273 113 4e-20 seq87537 91.5 1e-13 seq215049 89.7 5e-13 >seq76495 Length=1287 Score = 140 bits (154), Expect = 3e-28 Identities = 152/198 (77%), Gaps = 8/198 (4%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||| |||||||| || |||||||| ||| | || |||||||||||||| ||||| Sbjct 617 CTCCTTTTGGATGTTGTAGTCCGCCAAGGTACGCCCATCCTCCAGCTGCTTACCAGCAAA 558 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAG 35663 ||||||| ||||||||| | |||| || |||||||| ||| ||| || |||| | Sbjct 557 GATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGAT-TTTAGCTTTCACAT 499 Query 35664 TTGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTT 35720 | | | || || |||| |||||||||| || || ||||| || |||| || | Sbjct 498 TATCAATAGTATCAGAGCTC---TCCACCTCCAAGGTAATGGTTTTCCCAGTCAGCGTCT 442 Query 35721 TCACAAATATCTGCATTC 35738 | |||||||||||||||| Sbjct 441 TAACAAATATCTGCATTC 424 Score = 111 bits (122), Expect = 1e-19 Identities = 164/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||| ||||| | | ||||||||| || | | || ||||||||||||||| ||| Sbjct 426 TTCCTCCACGCAGACGCAACACCAAGTGAAGGGATGACTTCTTTTGAATGTTGTAGTCGA 367 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | | || | | || || || ||||| || ||||| ||||||| ||||||||| | | Sbjct 366 CAAGAGTCCTACCATCTTCAAGTTGCTTCCCAGCAAAAATCAACCTCTGCTGGTCTGGTG 307 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATT 35684 | | || ||||||||| |||||| ||||| | | | | ||||| |||| | Sbjct 306 GGATGCCTTCCTTGTCCTGTATCTTTGCCTTCACATTGTCAATGGTGTCGGAGCTC---T 250 Query 35685 CCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCA 35735 | ||||||| ||||| ||||| ||||| | ||| || ||||| || |||| Sbjct 249 CAACCTCCAAAGTGATGGTTTTTCCCGTGAGAGTCTTGACAAAAATTTGCA 199 >seq128449 Length=764 Score = 114 bits (126), Expect = 1e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||||||| || ||| |||||||| ||||| || || || Sbjct 428 CCACCACGGAGACGGAGCACCAAATGCAAAGTAGATTCCTTTTGGATGTTATAGTCAGCA 369 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| ||| | || || |||||||| || ||||| || | || ||||||||| | || Sbjct 368 AGGGTGCGCCCATCCTCTAGCTGCTTGCCAGCAAAAATTAGCCTCTGCTGGTCTGGTGGG 309 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCG---CTCGATTCC 35686 | || |||||| || ||||| ||||| | | | | ||||| ||| ||| Sbjct 308 ATGCCCTCCTTATCTTGAATCTTGGCCTTCACATTATCAATGGTGTCAGAACTC---TCC 252 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||||| ||||| || || || || | |||||||||||| || ||||| Sbjct 251 ACCTCCAAGGTGATGGTCTTGCCTGTGAGAGTTTTCACAAAAATTTGCAT 202 Score = 114 bits (126), Expect = 1e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||| || | ||| |||||||||||||||||| |||||| Sbjct 656 CCACCACGCAGGCGAAGCACCAAGTGGAGTGTAGACTCCTTTTGAATGTTGTAGTCGGCC 597 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || | | || || |||||||| || |||||||||| || |||||||| | || Sbjct 596 AATGTCCTTCCATCTTCAAGCTGCTTGCCGGCAAATATCAGCCTTTGCTGGTCAGGTGGG 537 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686 | | ||||||||| ||||| ||| | | | | | ||||| ||| ||| Sbjct 536 ATTCCTTCCTTGTCCTGTATCTTCGCCTTAACATTGTCGATTGTGTCAGAGCT---TTCT 480 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || |||| ||||| || || || |||| || |||||||| |||||||| Sbjct 479 ACTTCCAAAGTGATTGTCTTTCCGGTCAGTGTCTTCACAAAAATCTGCAT 430 Score = 82.4 bits (90), Expect = 7e-11 Identities = 143/204 (70%), Gaps = 8/204 (4%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | ||| | |||||| || | || |||||||| || |||||||| || Sbjct 200 CCACCACGGAGCCTGAGCACCAAGTGGAGAGTGGATTCCTTTTGGATATTGTAATCAGCA 141 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || || || ||||| || ||||| || | || ||||||||||| || Sbjct 140 AGGGTACGGCCATCCTCTAGTTGCTTGCCAGCAAAAATGAGCCTCTGCTGGTCCGGTGGG 81 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAGTTGCCACCGTGTC---GCTCGATTC 35685 | | ||||| ||| ||| ||| | ||||| | | | | ||||| |||| || Sbjct 80 ATTCCTTCCTTATCC-TGAATTTTGGCCTTCACATTATCAATGGTGTCTGAGCTC---TC 25 Query 35686 CACCTCCACCGTGATCGTTTTACC 35709 ||||||| ||||| ||||| || Sbjct 24 AACCTCCAAAGTGATGGTTTTTCC 1 >seq143273 Length=304 Score = 113 bits (124), Expect = 4e-20 Identities = 144/197 (73%), Gaps = 6/197 (3%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||| ||||| || || |||| ||| || | || || ||||||||||| || || Sbjct 277 CTCCTTTTGGATGTTATAGTCTGCCAGGGTACGTCCATCCTCTAGCTGCTTACCAGCGAA 218 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| | |||||||||| |||| | |||||||| ||| || ||||| | | Sbjct 217 GATCAGTCTTTGCTGGTCCGGGGGAATACCTTCCTTGTCTTGGATTTTGGCCTTCACATT 158 Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | || || ||| ||| ||||||| ||| || |||||||| |||| ||| || Sbjct 157 ATCAATAGTATCCGAGCT---TTCAACCTCCAACGTAATGGTTTTACCAGTCAGAGTCTT 101 Query 35722 CACAAATATCTGCATTC 35738 |||||| |||||||||| Sbjct 100 CACAAAGATCTGCATTC 84 >seq87537 Length=233 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/197 (71%), Gaps = 7/197 (4%) Strand=Plus/Minus Query 35548 CTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATAT 35607 ||| || ||||| || || || | || ||| | || ||||||||||| || ||||| || Sbjct 233 CTTCTGGATGTTATAGTCCGCAAGAGTACGCCCATCTTCCAGCTGCTTCCCTGCAAAGAT 174 Query 35608 CAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGC 35667 || || |||||||||| || | | ||||| ||| |||||| || | | | | Sbjct 173 CAGCCTTTGCTGGTCCGGCGGGATCCCTTCCTTATCCTGGATCTTGGCTTTAACATTATC 114 Query 35668 CACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | || || |||| |||||||| | ||||| || || ||||| | ||||||||| Sbjct 113 AATGGTATCGGAGCTC---TCCACCTCTAGAGTGATGGTCTTTCCCGTTAGAGTTTTCAC 57 Query 35725 AAATATCTGCATTCTGT 35741 ||| ||||||| ||||| Sbjct 56 AAAGATCTGCA-TCTGT 41 >seq215049 Length=488 Score = 89.7 bits (98), Expect = 5e-13 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || | || |||||| || |||||||| ||||||||||| | |||| || Sbjct 344 CACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTCCTGCCGTCCTC 403 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643 ||||||||| || || || |||| || ||||||||||| |||| | |||||||| Sbjct 404 CAGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGGGGAATTCCTTCCTTGTC 460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449474961100960