Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_026924.1 Length=174885 Score E Sequences producing significant alignments: (Bits) Value seq98 601 4e-167 seq28 522 3e-143 seq24621 102 9e-17 >seq98 Length=41871 Score = 601 bits (666), Expect = 4e-167 Identities = 735/997 (74%), Gaps = 8/997 (1%) Strand=Plus/Minus Query 159959 TTTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACT 160018 |||||| | ||| |||| ||| | ||||| || || | || ||||| || || | Sbjct 41567 TTTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTT 41508 Query 160019 GATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTC 160077 |||||| || ||| | ||| | ||||| ||||| || || |||| ||| | ||||| | Sbjct 41507 GATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCC 41449 Query 160078 CCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACA 160137 | || || || || || || || ||||||||||| |||| || | | || || |||| Sbjct 41448 CTCCAGTAGATATTGATGGTATTCGTGAACCCGTTTCTGGATCTTTACTTTACGGAAACA 41389 Query 160138 ACATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCA 160197 | || || |||||||| || |||| |||| ||| || ||| | ||||| || || | Sbjct 41388 ATATTATTTCTGGTGCCATTATTCCTACTTCTGCCGCTATAGGTTTGCACTTTTACCCAA 41329 Query 160198 TCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAG 160257 | |||||||| ||||| ||||||| ||| | || ||||| ||||||| |||| | | Sbjct 41328 TATGGGAAGCTGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTG 41269 Query 160258 TATTTCACTTCCTTATCGGCATCTATGCATATATGGGACGTGAGTGGGAACTTTCATACC 160317 | | |||||| | | || | | || ||||| ||||||||||||||| | || Sbjct 41268 TTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGCCGTGAGTGGGAACTTAGTTTCC 41209 Query 160318 GTTTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCATCTG 160377 |||| ||||||||||| ||||| ||| |||||||| ||||| || || ||||| | | Sbjct 41208 GTTTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCTACCG 41149 Query 160378 CTGTATTCCTCGTATATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTA 160437 |||| ||| | | || || | |||||||| || || || | ||||||| | || | Sbjct 41148 CTGTCTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCGGACGGTATGCCTTTAGGAA 41089 Query 160438 TCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCATC 160497 ||||||||||||| |||| ||| |||||||||| || || ||||| ||||||||||| | Sbjct 41088 TCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACC 41029 Query 160498 CGTTCCACATGCTCGGCGTTGCTGGGGTATTCGGTGGATCTTTGTTCTCTGCTATGCACG 160557 | || || ||| | ||||| || || |||||||| || || | ||| ||||||||| | Sbjct 41028 CATTTCATATGTTAGGCGTAGCGGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATG 40969 Query 160558 GAAGTCTCGTTACTTCCTCAC--TCGTTC-GTGAAACGACTGAAACAGAGTCACAGAACT 160614 | | || || |||| | | || | ||||| || |||| || || || Sbjct 40968 GTTCCTTGGTAAC---CTCAAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATG 40912 Query 160615 ACGGTTATAAGTTCGGTCAAGAGGAAGAGACCTACAACATCGTCGCAGCCCATGGTTACT 160674 | ||||| || || |||||||| | || || || || ||||| || || |||||||| | Sbjct 40911 AAGGTTACAAATTTGGTCAAGAAGGGGAAACTTATAATATCGTAGCCGCTCATGGTTATT 40852 Query 160675 TCGGTCGTTTGATCTTCCAATATGCATCATTCAACAACTCCCGTTCACTTCACTTCTTCC 160734 | || || ||||||||||||||||| ||||||||||| |||||| | |||||||||| Sbjct 40851 TTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCATTACACTTCTTCC 40792 Query 160735 TGGCAGCATGGCCTGTAGTCGGAATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCAT 160794 | || || ||||||||| | || ||||||||||| ||| | ||| ||||||| ||||| | Sbjct 40791 TAGCTGCTTGGCCTGTAATAGGTATCTGGTTCACCGCTTTAGGTATTAGCACTATGGCTT 40732 Query 160795 TCAACCTCAACGGTTTCAACTTCAACCAGTCCATCCTCGATGGTCAAGGTCGTGTACTGA 160854 ||||| | || |||||||| |||||||| ||| | | ||| |||||||||||||| | | Sbjct 40731 TCAACTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTA 40672 Query 160855 ACACCTGGGCAGACGTACTGAATCGTGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTA 160914 | || ||||| || | | || |||||| ||||||||||||||||||||||| |||| Sbjct 40671 ATACTTGGGCTGATATTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTA 40612 Query 160915 ACGCACACAACTTCCCACTCGACCTCGCTGCTGCTGA 160951 | || ||||||||||| || ||||| ||||||| ||| Sbjct 40611 ATGCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGA 40575 >seq28 Length=37419 Score = 522 bits (578), Expect = 3e-143 Identities = 733/1021 (72%), Gaps = 6/1021 (1%) Strand=Plus/Minus Query 161688 TTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCTGGTCTGGA 161747 ||||| || | || |||||| | |||| ||||| ||||| || || ||||| || Sbjct 31329 TTTGATATTATGGATGACTGGTTGCGGAGGGACCGTTTTGTTTTCGTAGGTTGGTCCGGT 31270 Query 161748 CTTCTTCTTCTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCACAACTTTC 161807 || | || |||| ||| || ||||| | || |||||| | || || |||||||| Sbjct 31269 CTATTGCTCTTTCCTTGTGCCTACTTTGCTTTAGGGGGTTGGTTCACAGGTACAACTTTT 31210 Query 161808 GCAACGAGCTGGTATACCCATGGTCTCGCTAGTTCCTATCTTGAGGG-TGCAAACTTTCT 161866 | ||| ||||||||||||||| | || || |||||| | || || ||||| ||| | Sbjct 31209 GTAACCTCCTGGTATACCCATGGATTGGCCAGCTCCTATTTGGAAGGCTGCAA-CTTCTT 31151 Query 161867 TACAGCGTCAGTTAGCACTCCAGCTGACGCTATGGGTCATTCTCTTCTTCTT-CTCTGGG 161925 || || ||||| || || ||| | | | | |||||| || || || || |||| Sbjct 31150 AACCGCTGCAGTTTCTACCCCTGCTAATAGTTTAGCACATTCT-TTGTTGTTACTATGGG 31092 Query 161926 GTCCTGAGGCTCAAGGGGATTTCGTCCGCTGGGTCCAACTTGGGGGACTCTGGAATTTTG 161985 ||||||| || ||||||||||| || ||| ||| | || || || |||| ||||| Sbjct 31091 GTCCTGAAGCGCAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTG 31032 Query 161986 TGGCACTCCATGGTGCCTTCGCCCTAATTGGATTCATGCTCCGTCAGTTTGAACTGGCAC 162045 | || ||||| || || |||| ||||| || || ||| | ||||| |||||| | || | Sbjct 31031 TTGCTCTCCACGGAGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAAATTGCTC 30972 Query 162046 GTCTTATTGGTATC-CGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTT 162104 | | || || || || || ||||| || || || |||||||| |||||||||||| Sbjct 30971 GA-TCCGTGCAATTGCGACCTTATAATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTT 30913 Query 162105 GTCAGCGTCTTCCTTATCTACCCATTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTT 162164 || || ||||| || || || | ||||| ||| ||||||| || || || ||| Sbjct 30912 GTTTCTGTATTCCTGATTTATCCGCTAGGTCAATCCGGTTGGTTCTTTGCACCTAGTTTT 30853 Query 162165 GGGGTGGCAGCAATCTTTAGATTCCTGTTGTTTCTTCAAGGATTCCATAACTGGACCCTG 162224 || || ||||| || ||| ||||| | ||||| | ||||| || ||||| ||||| ||| Sbjct 30852 GGTGTAGCAGCTATATTTCGATTCATCCTGTTTTTCCAAGGGTTTCATAATTGGACACTG 30793 Query 162225 AACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTTCTATCTGCTATT 162284 ||||| || ||||||||||||||||||||| || | || | || || || | |||||| Sbjct 30792 AACCCGTTTCATATGATGGGAGTTGCTGGTGTATTGGGCGCGGCTCTGCTGTGCGCTATT 30733 Query 162285 CACGGAGTCACAGTTGAAAATACATTATACGAGGATGGAGAACAAGCAAACACCTTTAAG 162344 || || | || || |||||||| |||| || || || || ||||| || || Sbjct 30732 CATGGTGCTACTGTCGAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTCCGC 30673 Query 162345 GCGTTTGATTCGACACAGGAGGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGG 162404 || ||| | | || || | ||||| |||||||| |||||||| || |||||||| ||| Sbjct 30672 GCTTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCCAACCGCTTTTGG 30613 Query 162405 TCGCAGATCTTCGGTATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTT 162464 || || ||||| || |||| ||||| || || || ||| | ||||| || ||||| ||| Sbjct 30612 TCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTT 30553 Query 162465 GTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTT 162524 || || || | ||| |||||| | || |||| | | ||||| ||||| ||||| Sbjct 30552 GTACCAGTAACTGGTTTATGGATGAGCGCTCTTGGAGTAGTAGGTCTGGCTCTGAACCTG 30493 Query 162525 CGTGCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCTGAGTTTGAAACG 162584 ||||| || || ||||| |||||| ||| | ||||| ||||||||||| ||||| || Sbjct 30492 CGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACT 30433 Query 162585 TTCTACACTAAGAACATTCTGCTCAATGAAGGACTACGTGCATGGTTAGCACCTGCCGAC 162644 ||||| || || || ||||| | |||||||| | ||||| ||| | || || || Sbjct 30432 TTCTATACCAAAAATATTCTTTTAAATGAAGGCATTCGTGCTTGGATGGCGGCTCAAGAT 30373 Query 162645 CAACCCCATGAGAACTTTATCTTCCCAGAAGAAGTTCTTCCTAGAGGCAACGCCCTTTAA 162704 || || ||||| ||| |||| ||||| || || ||||| || | || ||||| |||||| Sbjct 30372 CAGCCTCATGAAAACCTTATATTCCCCGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAA 30313 Query 162705 T 162705 | Sbjct 30312 T 30312 >seq24621 Length=2300 Score = 102 bits (112), Expect = 9e-17 Identities = 146/203 (72%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 161125 GTACATTTTAGATGCAGCAGAAGAGGCAGGAGTTGATATTAACTATTCTTGTCGTGCTGG 161184 |||||| | |||||||| || || || |||||||| | ||||| || | || || Sbjct 2240 GTACATCCTGGATGCAGCCGAGGATGCTGGAGTTGAGCTGCCATATTCCTGCAGGGCCGG 2181 Query 161185 TGCTTGCTCTTCCTGTGCAGGTAAAATTATTTCAGGTACAGTAGACCAGTCTGACCAGTC 161244 || |||||| ||||||| || || ||| || || ||||| |||||||| || || Sbjct 2180 GGCATGCTCTACCTGTGCTGGGAAGATTGCGTCGGGCACAGTCGACCAGTCCGATGGTTC 2121 Query 161245 CTTCTTGGATGATGACCAGATTGAATCTGGATTCCTTT-TGACATGTGTTGCATATCCTA 161303 |||| | ||||| | || | |||||| || || ||| |||| || ||| |||| || | Sbjct 2120 CTTCCTCGATGAGAATCA-AGTGAATCAGGGTTACTTGCTGACCTGCGTTTCATACCCAA 2062 Query 161304 CTAGCGATTGTGTGATTCAAACT 161326 || ||||||||||| || ||| Sbjct 2061 CTTCAGATTGTGTGATCCACACT 2039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557867366874400