Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_026926.1 Length=192108 Score E Sequences producing significant alignments: (Bits) Value seq98 578 5e-160 seq28 511 6e-140 >seq98 Length=41871 Score = 578 bits (640), Expect = 5e-160 Identities = 726/994 (73%), Gaps = 2/994 (0%) Strand=Plus/Minus Query 180980 TTTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACT 181039 |||||| | ||| |||| ||| | ||||| || || | || ||||| || || | Sbjct 41567 TTTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTT 41508 Query 181040 GATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTC 181098 |||||| || ||| | ||| | |||||| ||||| || || |||| ||| | ||||| | Sbjct 41507 GATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCC 41449 Query 181099 CCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACA 181158 | || || || || || || || ||||||||||| |||| || | | || || |||| Sbjct 41448 CTCCAGTAGATATTGATGGTATTCGTGAACCCGTTTCTGGATCTTTACTTTACGGAAACA 41389 Query 181159 ACATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCA 181218 | || || |||||||| || |||| |||| ||| || ||| | ||||| || || | Sbjct 41388 ATATTATTTCTGGTGCCATTATTCCTACTTCTGCCGCTATAGGTTTGCACTTTTACCCAA 41329 Query 181219 TCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAG 181278 | |||||||| ||||| ||||||| ||| | || ||||| ||||||| |||| | | Sbjct 41328 TATGGGAAGCTGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTG 41269 Query 181279 TCTTTCACTTCCTTATCGGCATTTATGCATACATGGGACGTGAATGGGAACTCTCTTACC 181338 | | |||||| | | || | | |||||||| ||||| |||||||| || || Sbjct 41268 TTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGCCGTGAGTGGGAACTTAGTTTCC 41209 Query 181339 GCTTAGGTATGCGCCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCAGCAGCATCTG 181398 | || ||||||||||| ||||| ||||||||| || ||||| || |||||||| | | Sbjct 41208 GTTTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCTACCG 41149 Query 181399 CTGTATTCCTAGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCACTTGGCA 181458 |||| ||| | | || || | |||||||| || || |||| ||||| | || | Sbjct 41148 CTGTCTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCGGACGGTATGCCTTTAGGAA 41089 Query 181459 TCTCTGGTACATTCAACTACATGCTTGTTTTCCAAGCAGAGCACAACATTCTGATGCATC 181518 |||||||||| ||||||| ||| |||| ||||| || ||||||||||| || ||||| | Sbjct 41088 TCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACC 41029 Query 181519 CCTTCCACATGTTGGGTGTCGCAGGTGTATTTGGTGGTTCACTGTTCAGTGCAATGCACG 181578 | || || ||||| || || || |||||||| || || || || |||||||| ||||| | Sbjct 41028 CATTTCATATGTTAGGCGTAGCGGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATG 40969 Query 181579 GTTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAGAACTATG 181638 |||| ||||| || || | || | || || || |||| ||| || || | | Sbjct 40968 GTTCCTTGGTAACCTCAAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAG 40909 Query 181639 GTTACAAGTTCGGACAAGAAGAAGAGACATACAACATCGTCGCCGCCCACGGTTACTTTG 181698 ||||||| || || ||||||| || || || || ||||| ||||| || ||||| |||| Sbjct 40908 GTTACAAATTTGGTCAAGAAGGGGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTG 40849 Query 181699 GTCGCTTGATCTTCCAATATGCTTCATTCAACAACTCACGTTCACTGCACTTCTTCCTCG 181758 | || |||||||||||||||||| ||||||||||| |||||| | ||||||||||| | Sbjct 40848 GCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCATTACACTTCTTCCTAG 40789 Query 181759 CAGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTGGGCGTAAGCACCATGGCATTTA 181818 | || ||||||||| | || |||||||||||||| | || | ||||| ||||| || | Sbjct 40788 CTGCTTGGCCTGTAATAGGTATCTGGTTCACCGCTTTAGGTATTAGCACTATGGCTTTCA 40729 Query 181819 ACCTCAATGGATTCAACTTCAACCAGTCTATCCTCGACGGACAAGGACGTGTCCTCAACA 181878 || | ||||| ||||| |||||||| || | | || | ||||| ||||| | || | Sbjct 40728 ACTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAATA 40669 Query 181879 CCTGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAGCGCAACG 181938 | ||||| || | |||||||||| || || |||||||| ||||| || || || | Sbjct 40668 CTTGGGCTGATATTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 40609 Query 181939 CGCACAACTTCCCGCTTGATCTTGCAGCAGCTGA 181972 | ||||||||||| || || || || || | ||| Sbjct 40608 CTCACAACTTCCCTCTAGACCTAGCTGCTGTTGA 40575 >seq28 Length=37419 Score = 511 bits (566), Expect = 6e-140 Identities = 723/1008 (72%), Gaps = 10/1008 (1%) Strand=Plus/Minus Query 182371 TGGACGACTGGGTTAAACGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 182430 |||| |||||| | |||| || ||||| || || |||||||| || || | || Sbjct 31319 TGGATGACTGGTTGCGGAGGGACCGTTTTGTTTTCGTAGGTTGGTCCGGTCTATTGCTCT 31260 Query 182431 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 182490 |||| ||| || |||| | || |||||| | || || ||| ||||||| || | Sbjct 31259 TTCCTTGTGCCTACTTTGCTTTAGGGGGTTGGTTCACAGGTACAACTTTTGTAACCTCCT 31200 Query 182491 GGTACACCCACGGTCTTGCTTCTTCCTATCTTGAAGG-TGCTAACTTTCTTACGGCAGCT 182549 |||| ||||| || | || |||||| | ||||| ||| ||||| | || || || Sbjct 31199 GGTATACCCATGGATTGGCCAGCTCCTATTTGGAAGGCTGC-AACTTCTTAACCGCTGCA 31141 Query 182550 GTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCT 182609 || || || |||||| || | | | |||||| | | |||| ||||||||||| | Sbjct 31140 GTTTCTACCCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAGCG 31081 Query 182610 CAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCAC 182669 || ||| |||| || ||||| ||| | || || || |||| ||| || ||||||||| Sbjct 31080 CAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCAC 31021 Query 182670 GGTGCCTTCGCTCTCATTGGTTTCATGCTTAGGCAATTTGAACTTGCTCGCCTGATTGGA 182729 || || |||| || || ||||| ||| | | ||||||||| ||||||| | || | Sbjct 31020 GGAGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAAATTGCTCGA-TCCGTGCA 30962 Query 182730 ATCA-GACCTTACAATGCGATTGCTTTTTCTGGTCCTATTGCTGTATTCGTCAGTGTGTT 182788 || ||||||| ||||| || || ||||||||||| |||||||| || || ||| || Sbjct 30961 ATTGCGACCTTATAATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATT 30902 Query 182789 CCTCATCTATCCTTTGGGACAGTCCTCTTGGTTTTTCGCGCCGTCCTTTGGTGTCGCGGC 182848 ||| || ||||| | || || ||| |||||| || || || |||||||| || || Sbjct 30901 CCTGATTTATCCGCTAGGTCAATCCGGTTGGTTCTTTGCACCTAGTTTTGGTGTAGCAGC 30842 Query 182849 GATCTTCAGGTTC---CTGTTGTTCCTTCAGGGTTTCCACAACTGGACACTCAACCCCTT 182905 || || | ||| ||||| |||| |||||||| | || |||||||| ||||| || Sbjct 30841 TATATTTCGATTCATCCTGTTTTTCCA--AGGGTTTC-ATAATTGGACACTGAACCCGTT 30785 Query 182906 CCATATGATGGGAGTTGCTGGTATACTGGGTGGAGCACTGCTCAGTGCTATCCATGGTGT 182965 ||||||||||||||||||||| || |||| | || ||||| | ||||| ||||||| Sbjct 30784 TCATATGATGGGAGTTGCTGGTGTATTGGGCGCGGCTCTGCTGTGCGCTATTCATGGTGC 30725 Query 182966 CACAGTAGAGAATACCTTGTATGAAGATGGAGAACAGGCAAACACATTTAAAGCGTTCGA 183025 || || || ||||| || | |||||| || || ||||| ||||| || || | Sbjct 30724 TACTGTCGAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTCCGCGCTTTTAA 30665 Query 183026 TTCCACTCAGGAGGAGGAGACCTATTCGATGGTTACAGCGAATCGTTTTTGGTCACAAAT 183085 | ||||| | || || || ||||| ||||| || || || || |||||||| ||||| Sbjct 30664 CCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCCAACCGCTTTTGGTCCCAAAT 30605 Query 183086 CTTCGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGT 183145 ||| |||||||| ||| |||||| |||||||| || ||||||||||| ||||| || || Sbjct 30604 CTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGT 30545 Query 183146 CATGGGTCTTTGGGTCTCTTCTATTGGGATCATTGGGCTTGCTCTTAATCTTCGTGCTTA 183205 | ||| | ||| | || |||| | | || || ||||| || || ||||| || Sbjct 30544 AACTGGTTTATGGATGAGCGCTCTTGGAGTAGTAGGTCTGGCTCTGAACCTGCGTGCCTA 30485 Query 183206 TGATTTTGTGAGTCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTACAC 183265 ||| || || ||| || || | ||||| ||||||||||| || ||||| ||||| || Sbjct 30484 TGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTATAC 30425 Query 183266 AAAGAACATCCTTCTCAATGAAGGACTACGTGCTTGGTTGGCACCTGCCGATCAACCACA 183325 || || || ||| | |||||||| | ||||||||| |||| || ||||| || || Sbjct 30424 CAAAAATATTCTTTTAAATGAAGGCATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCA 30365 Query 183326 TGAAAACTTCATCTTCCCTGAAGAAGTTCTACCTAGAGGTAACGCACT 183373 ||||||| | || ||||| || || |||||||| | || ||||| || Sbjct 30364 TGAAAACCTTATATTCCCCGAGGAGGTTCTACCCCGTGGAAACGCTCT 30317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 612819751327360